I'm not trying to use JSmol. I will get there at some point but currently I
need to stick with Jmol. So-- does that mean there *is* a Jmol.js file I should
be seeing somewhere?
On Jun 16, 2013, at 9:30 PM, Robert Hanson wrote:
> Frieda, I think you are downloading the Jmol files. You want
>
> http://chemapps.stolaf.edu/jmol/jsmol.zip
>
>
>
>
> On Sun, Jun 16, 2013 at 7:37 PM, Frieda Reichsman <[email protected]> wrote:
> I'd be happy to try this out and report back, but neither of those files are
> included in the downloaded folders, either. Where does one get them?
>
>
> On Jun 16, 2013, at 7:01 PM, Robert Hanson wrote:
>
>> Hi, Frieda. How are you doing?
>>
>> JSmol does not use Jmol.js. So that's right, you won't find it there. I
>> would appreciate your trying this combo instead:
>>
>> <script type="text/javascript" src="JSmol.min.js"></script>
>> <script type="text/javascript" src="Jmol2.js"></script>
>>
>> Let me know how that goes. For the most part, that will make older pages
>> work as though they had Jmol.js. But there will be a few issues I'm sure
>> with more complicated pages. Read the top comment in Jmol2.js.
>>
>>
>> Bob
>>
>>
>>
>>
>> On Sun, Jun 16, 2013 at 5:14 PM, Frieda Reichsman <[email protected]> wrote:
>> Thanks Bob, I have downloaded 13.1.15, and 13.1.16_a, but I do not see the
>> Jmol.js file in these releases. Where do I find the Jmol.js version that
>> would go with these downloads?
>>
>> On Jun 10, 2013, at 7:53 AM, Robert Hanson wrote:
>>
>>> Frieda, all new features go into Jmol 13.1 only, not Jmol 13.0. Sorry for
>>> not making that clear.
>>>
>>> Also, note that there are already some bug fixes for PyMOL PSE file reading
>>> particularly. See http://chemapps.stolaf.edu/jmol/Jmol-13.zip for the
>>> latest.
>>>
>>>
>>> On Sun, Jun 9, 2013 at 2:31 PM, Frieda Reichsman <[email protected]> wrote:
>>>
>>> On Apr 29, 2013, at 2:15 PM, Robert Hanson wrote:
>>> >
>>> > new feature: set cartoonLadder -- default TRUE (standard Jmol rendering
>>> > of nucleic acids), but when FALSE no bases, just "ladders", like PyMOL
>>>
>>> Hi Bob,
>>>
>>> I'm using the Jmol application, version 13.0.16, and finding that
>>> cartoonLadder is not recognized as a "set" parameter. Also, I saved a state
>>> script and it does not appear in the list of set parameters (not sure every
>>> one is supposed to be listed but it looks like it).
>>>
>>> And thanks for implementing this, btw-- it'll be great to have it available
>>> in Jmol.
>>>
>>> Best,
>>> Frieda
>>>
>>>
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>>> --
>>> Robert M. Hanson
>>> Larson-Anderson Professor of Chemistry
>>> St. Olaf College
>>> Northfield, MN
>>> http://www.stolaf.edu/people/hansonr
>>>
>>>
>>> If nature does not answer first what we want,
>>> it is better to take what answer we get.
>>>
>>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>>
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>>
>>
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>>
>> --
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
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>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
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