Bob,
I checked out your new JSmol page with the protein loaded in at:
http://chemapps.stolaf.edu/jmol/jsmol/simple.htm
The response time for this JSmol page is very fast and on par with Jmol. I
see no differences between the two with this new JSmol javascript that you
are using. So, kudos to you! And this is really cool development. Heck with
this Java nonsense. I am gonna switch to JSmol and use it exclusively from
now on. It is much easier and more widely acceptable as many of my
collaborators do not have Java installed on their machines. Thank you!
One quick question:
I notice that you also incorporated JmolButton, JmolCheckbox and JmolMenu
into JSmol. But, how do I use JmolScript feature of Jmol in JSmol?! For
example, I use the following javascript a lot in my Jmol:
<script type="text/javascript">
function pdb() {
jmolScript("load =PDBID")
</script>
<button onClick="pdb();">Load PDB</button>
How do I use the JmolScript syntax in JSmol?
Thanks,
Amjad
On Tue, Sep 10, 2013 at 3:18 PM, Robert Hanson <[email protected]> wrote:
> Angel, I'd appreciate your assessment of
>
> set platformSpeed
>
> Are there settings that you prefer for specific types of compounds? What
> would you recommend for proteins in general?
>
> Bob
>
>
>
> On Mon, Sep 9, 2013 at 12:51 PM, Angel Herráez <[email protected]>wrote:
>
>> > Something odd there. That's not been our experience.
>>
>> Well, my experience is that Java Jmol is faster than JSmol. Of course
>> this has improved a lot in the las few months and now it's rather
>> tolerable, and all depends on the size of the molecule loaded and
>> even personal perception, but for me yes, Java is still more agile in
>> both loading and responsiveness of the model.
>>
>> I am not denying the need to move forward into non-Java systems and
>> the excellent achievement in JSmol and prospects for the future.
>>
>>
>>
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>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
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