So that's a case-sensitivity issue. I thought I had fixed that....
On Tue, Sep 16, 2014 at 12:08 PM, Eric Martz <[email protected]>
wrote:
> Sorry, Bob, but I'm having strange results with this version. Each of
> these tests begins with running Jmol.jar anew.
>
> INCORRECT RESULTS:
> load =1d66
> restrict :a
> *0 atoms selected # and no atoms are visible*
> select visible
> *0 atoms selected*
> select all
> *1762 atoms selected*
> cartoon
> restrict :b
> *0 atoms selected # and no atoms are visible*
> select visible
> *285 atoms selected*
>
> CORRECT RESULT:
> load =1d66
> restrict *chain=a*
> *483 atoms selected* # and they are visible
> select visible
> *483 atoms selected*
>
> Thanks for working on this! Best regards, Eric
>
>
> On 9/15/14 11:10 AM, Robert Hanson wrote:
>
> Make that http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.7_2014.09.15b.zip
>
> On Mon, Sep 15, 2014 at 9:52 AM, Robert Hanson <[email protected]> wrote:
>
>> actually, since 14.1.14_2014.04.07
>>
>> On Mon, Sep 15, 2014 at 9:49 AM, Robert Hanson <[email protected]>
>> wrote:
>>
>>> don't worry. It was a general bug. Only indirectly related to RESTRICT.
>>>
>>> Jmol.___JmolVersion="14.3.7_2014.09.15"
>>>
>>> bug fix: CARTOON OFF does not remove visibility flag for alpha carbons
>>> (introduced in jmol-14.1.17_2014.06.03)
>>>
>>> see http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.7_2014.09.15.zip
>>>
>>>
>>>
>>> On Sun, Sep 14, 2014 at 9:17 AM, Eric Martz <[email protected]>
>>> wrote:
>>>
>>>> Hi, Angel,
>>>>
>>>> Thanks for the suggestion but my code is vastly more complicated than
>>>> that. Hundreds of lines of code per click, and it is tricky to sort out
>>>> what is selected at the end unless I redesign it.
>>>>
>>>> 'select visible' is a very attractive solution.
>>>>
>>>> Eric
>>>>
>>>> On 9/14/14 7:50 AM, Angel Herráez wrote:
>>>> > Hi Eric!
>>>> >
>>>> > Why do you need "select visible"?
>>>> > When you use restrcit, you are also having them selected at the same
>>>> time,
>>>> > or so I recollect. Is that not the case?
>>>> >
>>>> > load =1d66
>>>> > restrict 28-36:b
>>>> > # 73 atoms selected # now only the 73 restricted atoms are
>>>> visible
>>>> > zoomTo {selected}
>>>> >
>>>> >
>>>> >
>>>> ------------------------------------------------------------------------------
>>>> > Want excitement?
>>>> > Manually upgrade your production database.
>>>> > When you want reliability, choose Perforce
>>>> > Perforce version control. Predictably reliable.
>>>> >
>>>> http://pubads.g.doubleclick.net/gampad/clk?id=157508191&iu=/4140/ostg.clktrk
>>>> > _______________________________________________
>>>> > Jmol-users mailing list
>>>> > [email protected]
>>>> > https://lists.sourceforge.net/lists/listinfo/jmol-users
>>>> >
>>>>
>>>>
>>>>
>>>> ------------------------------------------------------------------------------
>>>> Want excitement?
>>>> Manually upgrade your production database.
>>>> When you want reliability, choose Perforce
>>>> Perforce version control. Predictably reliable.
>>>>
>>>> http://pubads.g.doubleclick.net/gampad/clk?id=157508191&iu=/4140/ostg.clktrk
>>>> _______________________________________________
>>>> Jmol-users mailing list
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>>>>
>>>
>>>
>>>
>>> --
>>> Robert M. Hanson
>>> Larson-Anderson Professor of Chemistry
>>> Chair, Department of Chemistry
>>> St. Olaf College
>>> Northfield, MN
>>> http://www.stolaf.edu/people/hansonr
>>>
>>>
>>> If nature does not answer first what we want,
>>> it is better to take what answer we get.
>>>
>>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>>
>>>
>>
>>
>> --
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> Chair, Department of Chemistry
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> Chair, Department of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
>
> ------------------------------------------------------------------------------
> Want excitement?
> Manually upgrade your production database.
> When you want reliability, choose Perforce
> Perforce version control. Predictably
> reliable.http://pubads.g.doubleclick.net/gampad/clk?id=157508191&iu=/4140/ostg.clktrk
>
>
>
> _______________________________________________
> Jmol-users mailing
> [email protected]https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
>
>
> ------------------------------------------------------------------------------
> Want excitement?
> Manually upgrade your production database.
> When you want reliability, choose Perforce.
> Perforce version control. Predictably reliable.
>
> http://pubads.g.doubleclick.net/gampad/clk?id=157508191&iu=/4140/ostg.clktrk
> _______________________________________________
> Jmol-users mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Department of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
Want excitement?
Manually upgrade your production database.
When you want reliability, choose Perforce.
Perforce version control. Predictably reliable.
http://pubads.g.doubleclick.net/gampad/clk?id=157508191&iu=/4140/ostg.clktrk
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
