On Wed, Sep 17, 2014 at 4:22 PM, Eric Martz <[email protected]>
wrote:
> Dear Bob,
>
> OK, its better, thanks! But sorry to say there still seems to be a bug re:
> restrict vs. visible. Invisible sidechains of DNA are still selectable as
> visible after a 'cartoon only' command. *When 'cartoon only' is omitted,
> 'select visible' works correctly.* Transcript:
>
>
not in my version...
> $ load =1d66
> TRANSCRIPTION/DNA 06-MAR-92 1D66
> DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX
> found biomolecule 1: D, E, A, B
>
> $ cartoon only # *if this is omitted, 'select visible' works correctly*
> $ restrict 28-36:b
> 73 atoms selected
> $ select visible
> 358 atoms selected
> $ select visible and dna and sidechain
> 285 atoms selected
> $
>
>
mine reads
$ load =1d66
TRANSCRIPTION/DNA 06-MAR-92 1D66
DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX
$ cartoons only
$ restrict 28-36:b
73 atoms selected
$ select visible
73 atoms selected
$ select visible and dna and sidechain
0 atoms selected
Maybe some odd version problem.
> On 9/16/14 7:25 PM, Robert Hanson wrote:
>
> http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.7_2014.09.16.zip
>
>
>
>
> ------------------------------------------------------------------------------
> Want excitement?
> Manually upgrade your production database.
> When you want reliability, choose Perforce
> Perforce version control. Predictably reliable.
>
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>
>
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Department of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
Want excitement?
Manually upgrade your production database.
When you want reliability, choose Perforce
Perforce version control. Predictably reliable.
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