Hello seven32

I find it is useful to drag the molecule round a bit  (preferably in the 
application but it also works fine with jsmol on webpages) to display the 
section I want, then right click for a menu,  show -> orientation.
This gives a moveto script [or alternative euler angle stuff] which can be 
simply copied and incorporated into an interactive link, with highlight etc.
See
http://www.biotopics.co.uk/jsmol/amylopectin.html
http://www.biotopics.co.uk/jsmol/DNA.html
and a few others

Hope this is helpful.


Richard Steane


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