Maryam wrote:
Hi All
We have 2 genes that are antisense to each other. I was wondering how we can distinguish the expression of these two genes. Thanks in advance.

1)  Strand-specific riboprobes on Northern blot

2) Specific RT-PCR - you can make it specific by designing the PCR based on the intron/exon structure of the forward/reverse transcript. Alternatively, if the transcripts are unspliced you can still be selective for forward/reverse transcripts by including only one of your primers during the reverse transcriptase step.

Peter
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