The BIOS have nothing to do with the OS, it's other coding layer, and the OS 
can't "disable" the HDD since it have their own firmware on microcontroller.
I would suggest: if you can boot from CD like you say, you can:
- Flash the BIOS. See your board and download from oficial site;
- Reboot and make a low-level dump of your HDD (you can use diskdump for this);
- Set your BIOS to standard config's, but legacy boot and the SATA port that 
your HDD where;
- Download the image of 5.6 from Calgary mirror (don't download from US 
mirrors);
- Try install.

If you can't, so: your HDD are broken or your hardware (maybe motherboard) are 
broken.

Greeting,
Luiz.

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