I wanna deploy two different Mysql versions 3.23 and 4.0
As far as I understand this is not possible am I correct??
No, it's perfectly possible. I have dozens of versions installed on my main machine. See the manual here:
http://www.mysql.com/doc/en/Multiple_servers.html
Since both version have different needs in case of my.cnf
The easiest way to provide server-specific options is to compile each version yourself, each with a different compiled-in data directory location. Then put a my.cnf file in the data directory and only the corresponding server will read it.
You can also arrange to start each server with --defaults-file, and specify a different file for each server.
-- Paul DuBois, Senior Technical Writer Madison, Wisconsin, USA MySQL AB, www.mysql.com
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