I realized that the reference to NIH Reporter did not take folks to the
actual page that reports NIH funded studies using the SW tools ant tech.
Attached is a CSV file listing active projects (15) and another with
pubs from these projects. This I think is one of the most concrete
measures of impact -- most of these projects are using SW tools, not
advancing them.
btw, effects on biomedical outcomes (saving lives) due to a technology
is next to impossible to measure in most cases (excluded medical
devices). For example, in biomed informatics, we are still debating the
utility and effectiveness of clinical decision support systems. For the
most part, they do improve practice (i.e., fewer errors) but relatively
few studies have found benefits in terms of patient outcomes.
-Rich
On 12/22/2011 01:02 PM, Andrea Splendiani (RRes-Roth) wrote:
Hi,
I think to make a case for use of Semantic Web technologies one has to
distinguish solution providers and companies which actually make use of these
technologies, better if in mission critical operations.
So sponsors won't bring that far. Except that, of course, being able to cite
that Oracle is player adds some substance to the technology offer.
Things like Elsevier using RDF/OWL in their production environment are very
convincing.
But I think there may be many case that are not so known.
Probably we need to reference success stories, which for the time being may not
be always Life Sciences related.
best,
Andrea
Il giorno 22/dic/2011, alle ore 16.15, Michael Miller ha scritto:
hi all,
indeed an interesting question, some great replies. most of the companies
i've seen making use of semantic technologies aren't necessarily focused
on life sciences, they are more generally focused on business
intelligence. but their technologies can also provide benefits to life
sciences as they mature.
Does anybody knows if such a list exists ?
take a look at SEMTECH sponsors[1]! oracle and topquadrant i know have
built strong support and applications. elsevier and deri were sponsors
also.
cheers,
michael
Michael Miller
Software Engineer
Institute for Systems Biology
[1]: http://semtech2011.semanticweb.com/
-----Original Message-----
From: Andrea Splendiani (RRes-Roth)
[mailto:andrea.splendi...@rothamsted.ac.uk]
Sent: Thursday, December 22, 2011 7:41 AM
To: Waard, Anita de A (ELS-NYC)
Cc: Oliver Ruebenacker; public-semweb-lifesci
Subject: Re: Evidence of Significance of Semantic Web for Life Sciences
Hi,
It would be interesting to setup a list of companies which makes a
mission-critical use of semantic-web technologies.
This could start to be some good evidence on the impact of these
technologies.
Does anybody knows if such a list exists ?
STI people have a list of Semantic Web companies, but I was thinking
about something smaller and more focused.
best,
Andrea
Il giorno 22/dic/2011, alle ore 15.25, Waard, Anita de A (ELS-NYC) ha
scritto:
Oliver,
Elsevier uses semantic technologies (i.e. OWL ontologies, a Linked
Data Repository, metadata in RDF) throughout all of our content
management, search and annotation systems. If OWL/RDF were to evaporate
tomorrow, our products (including the Cell and other cell biology
publications) wouldn't work - it's as simple as that. Is that enough
evidence? Let me know if you need something more formal.
Best,
- Anita.
Anita de Waard
Disruptive Technologies Director, Elsevier Labs
http://elsatglabs.com/labs/anita/
a.dewa...@elsevier.com
-----Original Message-----
From: Andrea Splendiani (RRes-Roth)
[mailto:andrea.splendi...@rothamsted.ac.uk]
Sent: Thu 12/22/2011 10:09
To: Oliver Ruebenacker
Cc: public-semweb-lifesci
Subject: Re: Evidence of Significance of Semantic Web for Life
Sciences
Hi Oliver,
I think it's hard to find this form of "breakthrough evidence" and
this may even be counterproductive to convince people.
If you present a high-level, breakthrough result (say, we save
lives), than you leave two open questions:
- how much of this is dependent on the computational support ?
- ok, they used semantic web technologies, could we use something
else ?
Another way to go would be to measure results over resources
(benefits is economic) or adoption (benefit is potential for economies
of scale).
There is a wide range of sources to cite about this out of the
biomedical world, from companies to governments.
Look for "Biomedical Semantics in the Semantic Web" in JBS, we write
something about adoption, you may find some link/inspiration there.
ciao,
Andrea
Il giorno 21/dic/2011, alle ore 16.39, Oliver Ruebenacker ha scritto:
Hello,
I am looking for evidence I can quote to convince non-experts of the
significance of applying Semantic Web to biomedical research,
especially computational cell biology.
I need a recorded public statement from a source recognizable as
authoritative to a non-expert: e.g. could be from a relevant
government agency, a well-known research institution (including
major
grad schools and companies), a well-known (i.e. well-known outside
the
field) expert, some one where a brief look at the biography
immediately suggests he or she is an authority, some one quoted in
major media, etc.
Significance could mean abstract things like advancing science and
health care, but even better would be tangible things like: saves
lives, saves money, cures cancer/malaria/AIDS, creates jobs, etc.
Thanks a lot!
Take care
Oliver
--
Oliver Ruebenacker, Computational Cell Biologist
Virtual Cell (http://vcell.org)
SBPAX: Turning Bio Knowledge into Math Models (http://www.sbpax.org)
http://www.oliver.curiousworld.org
Elsevier B.V. Registered Office: Radarweg 29, 1043 NX Amsterdam, The
Netherlands, Registration No. 33156677 (The Netherlands)
--
Richard Boyce, PhD
Assistant Professor of Biomedical Informatics
Scholar, Comparative Effectiveness Research Program
University of Pittsburgh
rd...@pitt.edu
412-648-6768
"Project Title","Administering IC","Application ID","Project Number","Type","Activity","IC","Serial Number","Support Year","Suffix","Subproject Number ","Contact PI Person ID","Contact PI / Project Leader","Other PIs","Organization Name","ARRA Indicator","FY","FY Total Cost ","FY Total Cost (Sub Projects)"
"REALIZING THE POTENTIAL OF REFERENCE ONTOLOGIES FOR THE SEMANTIC WEB","NHLBI",7754058,"5R01HL087706-04",5,"R01","HL",87706,4,,,1885120,"BRINKLEY, JAMES F","Not Applicable","UNIVERSITY OF WASHINGTON"," ",2010,673097,
"REALIZING THE POTENTIAL OF REFERENCE ONTOLOGIES FOR THE SEMANTIC WEB","NHLBI",7568948,"5R01HL087706-03",5,"R01","HL",87706,3,,,1885120,"BRINKLEY, JAMES F","Not Applicable","UNIVERSITY OF WASHINGTON"," ",2009,673097,
"REALIZING THE POTENTIAL OF REFERENCE ONTOLOGIES FOR THE SEMANTIC WEB","NHLBI",7355985,"5R01HL087706-02",5,"R01","HL",87706,2,,,1885120,"BRINKLEY, JAMES F","Not Applicable","UNIVERSITY OF WASHINGTON"," ",2008,653490,
"REALIZING THE POTENTIAL OF REFERENCE ONTOLOGIES FOR THE SEMANTIC WEB","NHLBI",7170187,"1R01HL087706-01",1,"R01","HL",87706,1,,,1885120,"BRINKLEY, JAMES F","Not Applicable","UNIVERSITY OF WASHINGTON"," ",2007,669840,
"INTERDISCIPLINARY CENTER FOR STRUCTURAL INFORMATICS","NLM",6582004,"1P20LM007714-01",1,"P20","LM",7714,1,,,1885120,"BRINKLEY, JAMES F","Not Applicable","UNIVERSITY OF WASHINGTON"," ",2003,613444,
"OPEN-SOURCE INFORMATICS USED TO IMPROVE OUTCOMES IN PEDIATRIC LIVER TRANSPLANTS","NIDDK",7999061,"1R43DK085839-01A1",1,"R43","DK",85839,1,"A1",,9848523,"BUCUVALAS, STEVEN PETER","Not Applicable","IOSEMANTICS, LLC"," ",2010,234581,
"A STUDY OF SOCIAL WEB DATA ON BUPRENORPHINE ABUSE USING SEMANTIC WEB TECHNOLOGY","NIDA",8190799,"1R21DA030571-01A1",1,"R21","DA",30571,1,"A1",,10394924,"DANIULAITYTE, RAMINTA ","SHETH, AMIT P","WRIGHT STATE UNIVERSITY"," ",2011,219000,
"OPEN-SOURCE TOOLKIT FOR KNOWLEDGE-BASED QUERYING OF TIME-ORIENTED DATA","NLM",7849699,"5R01LM009607-02",5,"R01","LM",9607,2,,,1949520,"DAS, AMARENDRA K","Not Applicable","STANFORD UNIVERSITY","YES",2010,809109,
"OPEN-SOURCE TOOLKIT FOR KNOWLEDGE-BASED QUERYING OF TIME-ORIENTED DATA","NLM",7654754,"1R01LM009607-01A2",1,"R01","LM",9607,1,"A2",,1949520,"DAS, AMARENDRA K","Not Applicable","STANFORD UNIVERSITY","YES",2009,801587,
"CRCNS: ONTOLOGY-BASED MULTI-SCALE INTEGRATION OF THE AUTISM PHENOME","NIMH",8067171,"5R01MH087756-03",5,"R01","MH",87756,3,,,1949520,"DAS, AMARENDRA K","Not Applicable","STANFORD UNIVERSITY"," ",2011,323887,
"CRCNS: ONTOLOGY-BASED MULTI-SCALE INTEGRATION OF THE AUTISM PHENOME","NIMH",7927177,"5R01MH087756-02",5,"R01","MH",87756,2,,,1949520,"DAS, AMARENDRA K","Not Applicable","STANFORD UNIVERSITY"," ",2010,328680,
"CRCNS: ONTOLOGY-BASED MULTI-SCALE INTEGRATION OF THE AUTISM PHENOME","NIMH",7778021,"1R01MH087756-01",1,"R01","MH",87756,1,,,1949520,"DAS, AMARENDRA K","Not Applicable","STANFORD UNIVERSITY"," ",2009,345180,
"HART TRAINING INNOVATION","NIEHS",6943812,"1R43ES013912-01",1,"R43","ES",13912,1,,,8747822,"GIJSBERTSEN, HANS ","Not Applicable","CYNTELIX, INC."," ",2005,96728,
"ONTOLOGY-BASED INFORMATION NETWORK TO SUPPORT VACCINE RESEARCH","NIAID",8120230,"5R01AI081062-03",5,"R01","AI",81062,3,,,7622745,"HE, YONGQUN ","Not Applicable","UNIVERSITY OF MICHIGAN AT ANN ARBOR"," ",2011,264994,
"ONTOLOGY-BASED INFORMATION NETWORK TO SUPPORT VACCINE RESEARCH","NIAID",7935464,"5R01AI081062-02",5,"R01","AI",81062,2,,,7622745,"HE, YONGQUN ","Not Applicable","UNIVERSITY OF MICHIGAN AT ANN ARBOR"," ",2010,267671,
"ONTOLOGY-BASED INFORMATION NETWORK TO SUPPORT VACCINE RESEARCH","NIAID",7735790,"1R01AI081062-01A1",1,"R01","AI",81062,1,"A1",,7622745,"HE, YONGQUN ","Not Applicable","UNIVERSITY OF MICHIGAN AT ANN ARBOR"," ",2009,270375,
"SEMANTIC DATA INTEGRATION FOR INTEGRATIVE CANCER BIOLOGY RESEARCH","NCI",7404838,"1R43CA132293-01",1,"R43","CA",132293,1,,,7771611,"KABUKA, MANSUR R.","Not Applicable","INFOTECH SOFT, INC."," ",2007,234689,
"INFORMATION INTEGRATION OF HETEROGENEOUS DATA SOURCES","NCRR",7798074,"5R44RR018667-05",5,"R44","RR",18667,5,,,7771611,"KABUKA, MANSUR R.","Not Applicable","INFOTECH SOFT, INC."," ",2010,507489,
"INFORMATION INTEGRATION OF HETEROGENEOUS DATA SOURCES","NCRR",7614360,"5R44RR018667-04",5,"R44","RR",18667,4,,,7771611,"KABUKA, MANSUR R.","Not Applicable","INFOTECH SOFT, INC."," ",2009,505764,
"INFORMATION INTEGRATION OF HETEROGENEOUS DATA SOURCES","NCRR",7481818,"2R44RR018667-03A1",2,"R44","RR",18667,3,"A1",,7771611,"KABUKA, MANSUR R.","Not Applicable","INFOTECH SOFT, INC."," ",2008,473392,
"INFORMATION INTEGRATION OF HETEROGENEOUS DATA SOURCES","NCRR",6881960,"1R43RR018667-01A2",1,"R43","RR",18667,1,"A2",,7771611,"KABUKA, MANSUR R.","Not Applicable","INFOTECH SOFT, INC."," ",2005,260661,
"EPIGENOMICS DATA ANALYSIS AND COORDINATION CENTER AT BAYLOR COLLEGE OF MEDICINE","NIDA",8326875,"3U01DA025956-04S1",3,"U01","DA",25956,4,"S1",,6905971,"MILOSAVLJEVIC, ALEKSANDAR ","BEAUDET, ARTHUR L.","BAYLOR COLLEGE OF MEDICINE"," ",2011,50000,
"EPIGENOMICS DATA ANALYSIS AND COORDINATION CENTER AT BAYLOR COLLEGE OF MEDICINE","NIDA",8128743,"5U01DA025956-04",5,"U01","DA",25956,4,,,6905971,"MILOSAVLJEVIC, ALEKSANDAR ","BEAUDET, ARTHUR L.","BAYLOR COLLEGE OF MEDICINE"," ",2011,1310400,
"EPIGENOMICS DATA ANALYSIS AND COORDINATION CENTER AT BAYLOR COLLEGE OF MEDICINE","NIDA",7900999,"5U01DA025956-03",5,"U01","DA",25956,3,,,6905971,"MILOSAVLJEVIC, ALEKSANDAR ","BEAUDET, ARTHUR L.","BAYLOR COLLEGE OF MEDICINE"," ",2010,1350927,
"EPIGENOMICS DATA ANALYSIS AND COORDINATION CENTER AT BAYLOR COLLEGE OF MEDICINE","NIDA",7904593,"3U01DA025956-02S1",3,"U01","DA",25956,2,"S1",,6905971,"MILOSAVLJEVIC, ALEKSANDAR ","BEAUDET, ARTHUR L.","BAYLOR COLLEGE OF MEDICINE"," ",2009,146676,
"EPIGENOMICS DATA ANALYSIS AND COORDINATION CENTER AT BAYLOR COLLEGE OF MEDICINE","NIDA",7690265,"5U01DA025956-02",5,"U01","DA",25956,2,,,6905971,"MILOSAVLJEVIC, ALEKSANDAR ","BEAUDET, ARTHUR L.","BAYLOR COLLEGE OF MEDICINE"," ",2009,1364573,
"EPIGENOMICS DATA ANALYSIS AND COORDINATION CENTER AT BAYLOR COLLEGE OF MEDICINE","NIDA",7585854,"1U01DA025956-01",1,"U01","DA",25956,1,,,6905971,"MILOSAVLJEVIC, ALEKSANDAR ","BEAUDET, ARTHUR L.","BAYLOR COLLEGE OF MEDICINE"," ",2008,1364573,
"PHARMACO RESPONSE SIGNATURES AND DISEASE MECHANISM","NHGRI",8254072,"3U54HG006097-01S1",3,"U54","HG",6097,1,"S1",,1964871,"MITCHISON, TIMOTHY J ","SORGER, PETER KARL","HARVARD UNIVERSITY (MEDICAL SCHOOL)"," ",2011,101500,
"PHARMACO RESPONSE SIGNATURES AND DISEASE MECHANISM","NHGRI",8068437,"1U54HG006097-01",1,"U54","HG",6097,1,,,1964871,"MITCHISON, TIMOTHY J ","SORGER, PETER KARL","HARVARD UNIVERSITY (MEDICAL SCHOOL)"," ",2010,1527753,
"NURSE PRACTITIONER ACCESS TO GENETICS HEALTH LITERATURE","NLM",7286291,"5F37LM008636-04",5,"F37","LM",8636,4,,,10548986,"PEACE, JANE ","Not Applicable","UNIVERSITY OF WISCONSIN MADISON"," ",2007,35984,
"NURSE PRACTITIONER ACCESS TO GENETICS HEALTH LITERATURE","NLM",7122136,"5F37LM008636-03",5,"F37","LM",8636,3,,,10548986,"PEACE, JANE ","Not Applicable","UNIVERSITY OF WISCONSIN MADISON"," ",2006,39750,
"NURSE PRACTITIONER ACCESS TO GENETICS HEALTH LITERATURE","NLM",6955060,"5F37LM008636-02",5,"F37","LM",8636,2,,,10548986,"PEACE, JANE ","Not Applicable","UNIVERSITY OF WISCONSIN MADISON"," ",2005,39150,
"NURSE PRACTITIONER ACCESS TO GENETICS HEALTH LITERATURE","NLM",6837265,"1F37LM008636-01",1,"F37","LM",8636,1,,,10548986,"PEACE, JANE ","Not Applicable","UNIVERSITY OF WISCONSIN MADISON"," ",2004,38596,
"LINCS INFORMATION FRAMEWORK (LIFE) TO INTEGRATE AND ANALYZE DIVERSE DATA SET","NHLBI",8231072,"1U01HL111561-01",1,"U01","HL",111561,1,,,9136437,"SCHURER, STEPHAN C","Not Applicable","UNIVERSITY OF MIAMI SCHOOL OF MEDICINE"," ",2011,379992,
"A SYNTHETIC BIOLOGY LIBRARY FOR THE SEMANTIC WEB","NHGRI",8199523,"9R42HG006737-02",9,"R42","HG",6737,2,,,10115169,"SIRIN, EVREN ","GENNARI, JOHN H","CLARK AND PARSIA, LLC"," ",2011,379537,
"A SYNTHETIC BIOLOGY LIBRARY FOR THE SEMANTIC WEB","NLM",7910247,"1R41LM010745-01",1,"R41","LM",10745,1,,,10115169,"SIRIN, EVREN ","GENNARI, JOHN H","CLARK AND PARSIA, LLC"," ",2010,99967,
"PHARMACO RESPONSE SIGNATURES AND DISEASE MECHANISM","NHGRI",8150482,"5U54HG006097-02",5,"U54","HG",6097,2,,,1883114,"SORGER, PETER KARL ","MITCHISON, TIMOTHY J","HARVARD UNIVERSITY (MEDICAL SCHOOL)"," ",2011,2576541,
"PROGRAM SUPPORT FOR ECOINFORMATICS; EXTENDED METADATA REGISTRY (XMDR) AND RELATED","NCI",7713144,"Y1CO7144-2-0-1",,"Y01",,,,,,0,"Unavailable","Not Applicable",," ",2008,15000,
"INTEGRATIVE PIPELINE FOR ANALYSIS & TRANSLATIONAL APPLICATION OF TCGA DATA (GDAC)","NCI",8123272,"5U24CA143883-03",5,"U24","CA",143883,3,,,9398053,"WEINSTEIN, JOHN N ","MILLS, GORDON B.;YUNG, W K ALFRED","UNIVERSITY OF TEXAS MD ANDERSON CAN CTR"," ",2011,1438358,
"INTEGRATIVE PIPELINE FOR ANALYSIS & TRANSLATIONAL APPLICATION OF TCGA DATA (GDAC)","NCI",8143017,"3U24CA143883-02S2",3,"U24","CA",143883,2,"S2",,9398053,"WEINSTEIN, JOHN N ","MILLS, GORDON B.;YUNG, W K ALFRED","UNIVERSITY OF TEXAS MD ANDERSON CAN CTR","YES",2010,900000,
"INTEGRATIVE PIPELINE FOR ANALYSIS & TRANSLATIONAL APPLICATION OF TCGA DATA (GDAC)","NCI",8143016,"3U24CA143883-02S1",3,"U24","CA",143883,2,"S1",,9398053,"WEINSTEIN, JOHN N ","MILLS, GORDON B.;YUNG, W K ALFRED","UNIVERSITY OF TEXAS MD ANDERSON CAN CTR","YES",2010,841344,
"INTEGRATIVE PIPELINE FOR ANALYSIS & TRANSLATIONAL APPLICATION OF TCGA DATA (GDAC)","NCI",7942759,"5U24CA143883-02",5,"U24","CA",143883,2,,,9398053,"WEINSTEIN, JOHN N ","MILLS, GORDON B.;YUNG, W K ALFRED","UNIVERSITY OF TEXAS MD ANDERSON CAN CTR"," ",2010,1491837,
"INTEGRATIVE PIPELINE FOR ANALYSIS & TRANSLATIONAL APPLICATION OF TCGA DATA (GDAC)","NCI",7788997,"1U24CA143883-01",1,"U24","CA",143883,1,,,9398053,"WEINSTEIN, JOHN N ","MILLS, GORDON B.;YUNG, W K ALFRED","UNIVERSITY OF TEXAS MD ANDERSON CAN CTR"," ",2009,1484172,
"SEMBOWSER: A SEMANTIC BIOLOGICAL WEB SERVICES REGISTRY","NCRR",7956008,"5P41RR018502-07",5,"P41","RR",18502,7,,6247,6203445,"YORK, WILLIAM ","Not Applicable","UNIVERSITY OF GEORGIA (UGA)"," ",2009,,25343
"SEMBOWSER: A SEMANTIC BIOLOGICAL WEB SERVICES REGISTRY","NCRR",7722642,"2P41RR018502-06",2,"P41","RR",18502,6,,8752,6203445,"YORK, WILLIAM ","Not Applicable","UNIVERSITY OF GEORGIA (UGA)"," ",2008,,37605
"SEMBOWSER: A SEMANTIC BIOLOGICAL WEB SERVICES REGISTRY","NCRR",7602814,"5P41RR018502-05",5,"P41","RR",18502,5,,8856,6203445,"YORK, WILLIAM ","Not Applicable","UNIVERSITY OF GEORGIA (UGA)"," ",2007,,24702
"SEMBOWSER: A SEMANTIC BIOLOGICAL WEB SERVICES REGISTRY","NCRR",7359087,"5P41RR018502-04",5,"P41","RR",18502,4,,8637,6203445,"YORK, WILLIAM ","Not Applicable","UNIVERSITY OF GEORGIA (UGA)"," ",2006,,24708
"Core Project Number","Affilation","Authors "," Country"," ISSN","Journal Issue","Journal (Link to PubMed abstract) ","Journal Title ABBR","Journal Volume","Language","Page Number","PMC ID","PMID","PUB Date","Title (Link to full-text in PubMed Central) ","PUB Year","Related Publications in PubMed","Related Publications in Google Scholar","Articles Citing"," from PubMed Central","Articles Citing"," from Google Scholar",,,,,,,,
"U54HG006097","IBM Computational Biology Center"," Yorktown Heights"," NY",10598," USA.","Prill, Robert J; Saez-Rodriguez, Julio; Alexopoulos, Leonidas G; Sorger, Peter K; Stolovitzky, Gustavo","United States","1937-9145",189,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21900204' target='_blank'>Science signaling.</a>","Sci Signal",4,"eng","mr7",,21900204,"2011 Sep 6;","Crowdsourcing network inference: the DREAM predictive signaling network challenge.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21900204&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21900204' target='_blank'>Related"," Google Scholar</a>",," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21900204' target='_blank'>Cited By"," Google</a>",,,
"P41RR018502","Complex Carbohydrate Research Center"," University of Georgia"," Athens"," Georgia 30602"," United States.","Zhao, Peng; Viner, Rosa; Teo, Chin Fen; Boons, Geert-Jan; Horn, David; Wells, Lance","United States","1535-3907",9,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21740066' target='_blank'>Journal of proteome research.</a>","J Proteome Res",10,"eng","4088-104",3172619,21740066,"2011 Sep 2;","Combining high-energy C-trap dissociation and electron transfer dissociation for protein O-GlcNAc modification site assignment.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21740066&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21740066' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3172619&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21740066' target='_blank'>Cited By"," Google</a>",,
"P41RR018502","Complex Carbohydrate Research Center"," University of Georgia"," 315 Riverbend Road"," Athens"," Georgia 30602"," USA.","Mo, Kai-For; Fang, Tao; Stalnaker, Stephanie H; Kirby, Pamela S; Liu, Mian; Wells, Lance; Pierce, Michael; Live, David H; Boons, Geert-Jan","United States","1520-5126",36,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21812486' target='_blank'>Journal of the American Chemical Society.</a>","J Am Chem Soc",133,"eng","14418-30",3176502,21812486,"2011 Sep 14;","Synthetic, structural, and biosynthetic studies of an unusual phospho-glycopeptide derived from ��-dystroglycan.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21812486&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21812486' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3176502&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21812486' target='_blank'>Cited By"," Google</a>",
"P41RR018502","Division of Translational Research"," Department of Internal Medicine"," University of Texas Southwestern Medical Center"," 5323 Harry Hines Boulevard"," Dallas"," TX 75390-9185"," United States.","Whitman, Chad M; Yang, Fan; Kohler, Jennifer J","England","1464-3405",17,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21620696' target='_blank'>Bioorganic & medicinal chemistry letters.</a>","Bioorg Med Chem Lett",21,"eng","5006-10",3156312,21620696,"2011 Sep 1;","Modified GM3 gangliosides produced by metabolic oligosaccharide engineering.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21620696&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21620696' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3156312&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21620696' target='_blank'>Cited By"," Google</a>"
"P41RR018502","University of Georgia"," Complex Carbohydrate Research Center"," Athens"," GA"," United States.","Stalnaker, Stephanie H; Stuart, Ryan; Wells, Lance","England","1879-033X",5,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21945038' target='_blank'>Current opinion in structural biology.</a>","Curr Opin Struct Biol",21,"eng","603-9",,21945038,"2011 Oct;","Mammalian O-mannosylation: unsolved questions of structure/function.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21945038&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21945038' target='_blank'>Related"," Google Scholar</a>",," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21945038' target='_blank'>Cited By"," Google</a>",,,
"U01DA025956","Division of Biostatistics"," Dan L. Duncan Cancer Center and Department of Molecular and Cellular Biology"," Baylor College of Medicine"," Houston"," Texas 77030"," USA.","Xi, Yuanxin; Yao, Jianhui; Chen, Rui; Li, Wei; He, Xiangwei","United States","1549-5469",5,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21363969' target='_blank'>Genome research.</a>","Genome Res",21,"eng","718-24",3083088,21363969,"2011 May;","Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21363969&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21363969' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3083088&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21363969' target='_blank'>Cited By"," Google</a>",
"P41RR018502","Department of Biochemistry and Molecular Biology"," Indiana University School of Medicine"," Indianapolis"," IN 46202"," USA.","Tagliabracci, Vincent S; Heiss, Christian; Karthik, Chandra; Contreras, Christopher J; Glushka, John; Ishihara, Mayumi; Azadi, Parastoo; Hurley, Thomas D; DePaoli-Roach, Anna A; Roach, Peter J","United States","1932-7420",3,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21356517' target='_blank'>Cell metabolism.</a>","Cell Metab",13,"eng","274-82",3124772,21356517,"2011 Mar 2;","Phosphate incorporation during glycogen synthesis and Lafora disease.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21356517&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21356517' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3124772&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21356517' target='_blank'>Cited By"," Google</a>",,
"U01DA025956","Molecular and Human Genetics Department"," Baylor College of Medicine"," Houston"," TX 77030"," USA. amilo...@bcm.edu","Milosavljevic, Aleksandar","England","0168-9525",6,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21507501' target='_blank'>Trends in genetics : TIG.</a>","Trends Genet",27,"eng","242-50",3104125,21507501,"2011 Jun;","Emerging patterns of epigenomic variation.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21507501&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21507501' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3104125&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21507501' target='_blank'>Cited By"," Google</a>",,
"U54HG006097","Center for Cell Decision Processes"," Department of Systems Biology"," Harvard Medical School"," Boston"," Massachusetts"," USA.","Millard, Bjorn L; Niepel, Mario; Menden, Michael P; Muhlich, Jeremy L; Sorger, Peter K","United States","1548-7105",6,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21516115' target='_blank'>Nature methods.</a>","Nat Methods",8,"eng","487-93",3105758,21516115,"2011 Jun;","Adaptive informatics for multifactorial and high-content biological data.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21516115&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21516115' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3105758&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21516115' target='_blank'>Cited By"," Google</a>",
"P41RR018502","Department of Biochemistry and Molecular Biology"," University of Georgia"," Athens"," GA 30602"," USA.","Gerwe, Brian A; Angel, Peggi M; West, Franklin D; Hasneen, Kowser; Young, Amber; Orlando, Ron; Stice, Steven L","Germany","1615-9861",12,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21598385' target='_blank'>Proteomics.</a>","Proteomics",11,"eng","2515-27",,21598385,"2011 Jun;","Membrane proteomic signatures of karyotypically normal and abnormal human embryonic stem cell lines and derivatives.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21598385&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21598385' target='_blank'>Related"," Google Scholar</a>",," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21598385' target='_blank'>Cited By"," Google</a>",,,
"P41RR018502","Department of Molecular Microbiology"," Washington University School of Medicine"," St. Louis"," Missouri 63110"," USA.","Reilly, Morgann C; Aoki, Kazuhiro; Wang, Zhuo A; Skowyra, Michael L; Williams, Matthew; Tiemeyer, Michael; Doering, Tamara L","United States","1083-351X",30,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21606487' target='_blank'>The Journal of biological chemistry.</a>","J Biol Chem",286,"eng","26888-99",3143648,21606487,"2011 Jul 29;","A xylosylphosphotransferase of Cryptococcus neoformans acts in protein O-glycan synthesis.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21606487&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21606487' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3143648&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21606487' target='_blank'>Cited By"," Google</a>",,
"U54HG006097","Department of Biological Chemistry and Molecular Pharmacology"," Harvard Medical School and Department of Cancer Biology"," Dana-Farber Cancer Institute"," Boston"," MA 02115"," USA.","Miduturu, Chandrasekhar V; Deng, Xianming; Kwiatkowski, Nicholas; Yang, Wannian; Brault, Laurent; Filippakopoulos, Panagis; Chung, Eunah; Yang, Qingkai; Schwaller, Juerg; Knapp, Stefan; King, Randall W; Lee, Jiing-Dwan; Herrgard, Sanna; Zarrinkar, Patrick; Gray, Nathanael S","United States","1879-1301",7,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21802008' target='_blank'>Chemistry & biology.</a>","Chem Biol",18,"eng","868-79",3171802,21802008,"2011 Jul 29;","High-throughput kinase profiling: a more efficient approach toward the discovery of new kinase inhibitors.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21802008&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21802008' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3171802&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21802008' target='_blank'>Cited By"," Google</a>",
"P41RR018502","Complex Carbohydrate Research Center"," University of Georgia"," Athens"," Georgia 30602"," USA.","Barnes, Jarrod; Lim, Jae-Min; Godard, Anne; Blanchard, Frederic; Wells, Lance; Steet, Richard","United States","1083-351X",28,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21613225' target='_blank'>The Journal of biological chemistry.</a>","J Biol Chem",286,"eng","24855-64",3137060,21613225,"2011 Jul 15;","Extensive mannose phosphorylation on leukemia inhibitory factor (LIF) controls its extracellular levels by multiple mechanisms.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21613225&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21613225' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3137060&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21613225' target='_blank'>Cited By"," Google</a>",,
"R01AI081062","Unit for Laboratory Animal Medicine"," University of Michigan Medical School"," Center for Computational Medicine and Bioinformatics"," University of Michigan"," Ann Arbor"," MI 48109"," USA.","Yang, Brian; Sayers, Samantha; Xiang, Zuoshuang; He, Yongqun","England","1362-4962","Database issue","<a href='http://www.ncbi.nlm.nih.gov/pubmed/20959289' target='_blank'>Nucleic acids research.</a>","Nucleic Acids Res",39,"eng","D1073-8",3013795,20959289,"2011 Jan;","Protegen: a web-based protective antigen database and analysis system.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=20959289&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/20959289' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3013795&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/20959289' target='_blank'>Cited By"," Google</a>"
"R01HL087706","Department of Biomedical & Health Informatics"," University of Washington"," USA. genn...@uw.edu","Gennari, John H; Neal, Maxwell L; Galdzicki, Michal; Cook, Daniel L","United States","1532-0480",1,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/20601121' target='_blank'>Journal of biomedical informatics.</a>","J Biomed Inform",44,"eng","146-54",2989341,20601121,"2011 Feb;","Multiple ontologies in action: composite annotations for biosimulation models.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=20601121&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/20601121' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=2989341&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/20601121' target='_blank'>Cited By"," Google</a>",,,,
"R01HL087706","University of Washington"," Computer Science and Engineering"," Box 352350"," Seattle"," WA 98195"," USA. m...@cs.washington.edu","Shaw, Marianne; Detwiler, Landon T; Noy, Natalya; Brinkley, James; Suciu, Dan","United States","1532-0480",1,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/20800106' target='_blank'>Journal of biomedical informatics.</a>","J Biomed Inform",44,"eng","102-17",3042057,20800106,"2011 Feb;","vSPARQL: a view definition language for the semantic web.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=20800106&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/20800106' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3042057&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/20800106' target='_blank'>Cited By"," Google</a>",
"U24CA143883","Stanford Genome Technology Center"," Stanford University"," Palo Alto"," CA 94304"," USA. pds...@stanford.edu","Shen, Peidong; Wang, Wenyi; Krishnakumar, Sujatha; Palm, Curtis; Chi, Aung-Kyaw; Enns, Gregory M; Davis, Ronald W; Speed, Terence P; Mindrinos, Michael N; Scharfe, Curt","United States","1091-6490",16,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21467225' target='_blank'>Proceedings of the National Academy of Sciences of the United States of America.</a>","Proc Natl Acad Sci U S A",108,"eng","6549-54",3080966,21467225,"2011 Apr 19;","High-quality DNA sequence capture of 524 disease candidate genes.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21467225&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21467225' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3080966&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21467225' target='_blank'>Cited By"," Google</a>",,
"U01DA025956","Graduate Program in Structural and Computational Biology and Molecular Biophysics"," Baylor College of Medicine"," Houston"," Texas"," United States of America.","Miller, Christopher A; Hampton, Oliver; Coarfa, Cristian; Milosavljevic, Aleksandar","United States","1932-6203",1,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21305028' target='_blank'>PloS one.</a>","PLoS One",6,"eng","e16327",3031566,21305028,"2011;","ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21305028&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21305028' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3031566&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21305028' target='_blank'>Cited By"," Google</a>",,
"R41LM010745","Biomedical & Health Informatics"," University of Washington"," Seattle"," Washington"," United States of America.","Galdzicki, Michal; Rodriguez, Cesar; Chandran, Deepak; Sauro, Herbert M; Gennari, John H","United States","1932-6203",2,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21390321' target='_blank'>PloS one.</a>","PLoS One",6,"eng","e17005",3044748,21390321,"2011;","Standard biological parts knowledgebase.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21390321&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21390321' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3044748&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21390321' target='_blank'>Cited By"," Google</a>",,
"R01AI081062","Unit for Laboratory Animal Medicine"," University of Michigan"," Ann Arbor"," MI 48109"," USA. yongq...@med.umich.edu.","Ozgur, Arzucan; Xiang, Zuoshuang; Radev, Dragomir R; He, Yongqun","England","2041-1480",,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21624163' target='_blank'>Journal of biomedical semantics.</a>","J Biomed Semantics","2 Suppl 2","eng","S8",3102897,21624163,"2011;","Mining of vaccine-associated IFN-�� gene interaction networks using the Vaccine Ontology.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21624163&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21624163' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3102897&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21624163' target='_blank'>Cited By"," Google</a>",,
"U01DA025956","Department of Molecular and Human Genetics"," Human Genome Sequencing Center"," Baylor College of Medicine"," Houston"," Texas 77030"," USA.","Fawcett, Gloria L; Raveendran, Muthuswamy; Deiros, David Rio; Chen, David; Yu, Fuli; Harris, Ronald Alan; Ren, Yanru; Muzny, Donna M; Reid, Jeffrey G; Wheeler, David A; Worley, Kimberly C; Shelton, Steven E; Kalin, Ned H; Milosavljevic, Aleksandar; Gibbs, Richard; Rogers, Jeffrey","England","1471-2164",,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21668978' target='_blank'>BMC genomics.</a>","BMC Genomics",12,"eng",311,3141668,21668978,"2011;","Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta).",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21668978&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21668978' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3141668&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21668978' target='_blank'>Cited By"," Google</a>",
"U24CA143883","Digital Enterprise Research Institute"," National University of Ireland at Galway"," IDA Business Park"," Lower Dangan"," Galway"," Ireland. helena.d...@deri.org","Deus, Helena F; Correa, Miria C; Stanislaus, Romesh; Miragaia, Maria; Maass, Wolfgang; de Lencastre, Herminia; Fox, Ronan; Almeida, Jonas S","England","1471-2105",,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21756325' target='_blank'>BMC bioinformatics.</a>","BMC Bioinformatics",12,"eng",285,3155508,21756325,"2011;","S3QL: a distributed domain specific language for controlled semantic integration of life sciences data.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21756325&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21756325' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3155508&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21756325' target='_blank'>Cited By"," Google</a>",
"R01AI081062","Bioinformatics Program"," University of Michigan"," Ann Arbor"," MI 48109"," USA.","Hur, Junguk; Xiang, Zuoshuang; Feldman, Eva L; He, Yongqun","England","1471-2172",,"<a href='http://www.ncbi.nlm.nih.gov/pubmed/21871085' target='_blank'>BMC immunology.</a>","BMC Immunol",12,"eng",49,3180695,21871085,"2011;","Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network.",2011,"<a href='http://www.ncbi.nlm.nih.gov/pubmed?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&IdsFromResult=21871085&ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&log$=relatedarticles&logdbfrom=pubmed' target='_blank'>Related"," PubMed</a> "," <a href='http://scholar.google.com/scholar?q=related:http://www.ncbi.nlm.nih.gov/pubmed/21871085' target='_blank'>Related"," Google Scholar</a>","<a href='http://www.pubmedcentral.nih.gov/tocrender.fcgi?artid=3180695&action=cited' target='_blank'>Cited By"," PMC</a> "," <a href='http://scholar.google.com/scholar?hl=en&lr=&cites=http://www.ncbi.nlm.nih.gov/pubmed/21871085' target='_blank'>Cited By"," Google</a>",,
