Enrico,
According to Boost web site (
http://www.boost.org/doc/libs/1_55_0/libs/log/doc/html/log/installation.html)
it has been tested and working with gcc 4.5+.
Try to update your gcc and gcc-c++ to the latest versions available... I
know CentOS is not up to date...
At the moment I do not recall if I did any update to gcc.
I will get back to you on Monday for this, except if you are in a hurry
I'll go from the office tomorrow to check my dev machine.
Best,
Christos
Christos Kannas
Researcher
Ph.D Student
Mob (UK): +44 (0) 7447700937
Mob (Cyprus): +357 99530608
[image: View Christos Kannas's profile on LinkedIn]
<http://cy.linkedin.com/in/christoskannas>
On 24 July 2014 15:02, Enrico Perspicace <e.perspic...@mx.uni-saarland.de>
wrote:
> Hi Christos,
>
> Thanks for your help.
>
> I tried what you said but I got an error with boost.
>
> I think the problem came from here...
>
> I use Canopy environment, it is like Anaconda which include Numpy and it
> is detected when I did ./bootstrap.sh
>
> [root@eric-pc boost_1_55_0]# ./bootstrap.sh --with-libraries=python,regex
> Building Boost.Build engine with toolset gcc... tools/build/v2/engine/bin.
> linuxx86_64/b2
> Detecting Python version... 2.7
> Detecting Python root... /root/Enthought/Canopy_64bit/User
> Unicode/ICU support for Boost.Regex?... not found.
> Generating Boost.Build configuration in project-config.jam...
>
> Bootstrapping is done. To build, run:
>
> ./b2
>
> To adjust configuration, edit 'project-config.jam'.
> Further information:
>
> - Command line help:
> ./b2 --help
>
> - Getting started guide:
> http://www.boost.org/more/getting_started/unix-variants.html
>
> - Boost.Build documentation:
> http://www.boost.org/boost-build2/doc/html/index.html
>
> [root@eric-pc boost_1_55_0]#
>
> But, when I performed ./b2 address-model=64 cflags=-fPIC cxxflags=-fPIC
> Install I got errors of compilation with gcc (I use gcc (GCC) 4.1.2
> 20080704 (Red Hat 4.1.2-54)) and should be ok (miminum required gcc 3.3:
>
> ...failed gcc.compile.c++ bin.v2/libs/python/build/gcc-
> 4.1.2/release/address-model-64/link-static/threading-
> multi/object/function_doc_signature.o...
> ...skipped <pbin.v2/libs/python/build/gcc-4.1.2/release/address-
> model-64/link-static/threading-multi>libboost_python.a(clean) for lack of
> <pbin.v2/libs/python/build/gcc-4.1.2/release/address-model-64/link-static/
> threading-multi>numeric.o...
> ...skipped <pbin.v2/libs/python/build/gcc-4.1.2/release/address-
> model-64/link-static/threading-multi>libboost_python.a for lack of
> <pbin.v2/libs/python/build/gcc-4.1.2/release/address-model-64/link-static/
> threading-multi>numeric.o...
> ...skipped <p/usr/local/lib>libboost_python.a for lack of
> <pbin.v2/libs/python/build/gcc-4.1.2/release/address-model-64/link-static/
> threading-multi>libboost_python.a...
> common.copy /usr/local/lib/libboost_regex.a
> ...failed updating 56 targets...
> ...skipped 6 targets...
> ...updated 3 targets...
>
>
> Regards,
>
> Enrico
>
>
>
> Quoting Christos Kannas <chriskan...@gmail.com>:
>
> Hi Enrico,
>>
>> The latest version of RDKit does not require flex or bison, thankfully.
>>
>> In the attached file I list the commands that I used to build CMake
>> (2.8.12.2), Boost libraries (1.55) and RDKit (2014_03_1) on a CentOS 5.10
>> VM.
>> In my case I was using an Anaconda Python environment so I didn't have to
>> install NumPy, since it is bundled to it.
>>
>> Best,
>>
>> Christos
>>
>> Christos Kannas
>>
>> Researcher
>> Ph.D Student
>>
>> Mob (UK): +44 (0) 7447700937
>> Mob (Cyprus): +357 99530608
>>
>> [image: View Christos Kannas's profile on LinkedIn]
>> <http://cy.linkedin.com/in/christoskannas>
>>
>>
>>
>> On 24 July 2014 10:05, Enrico Perspicace <e.perspic...@mx.uni-saarland.de
>> >
>> wrote:
>>
>>
>>> Dear all,
>>>
>>> I would like to install RDKit 2014 on Centos 5.10 (Final) but I did not
>>> succeed!
>>>
>>> I follow Instructions for Installation on RDKIT website but I got an
>>> error
>>> when I used cmake command line...
>>>
>>> Indeed, cmake is not able to find boost_python library.
>>>
>>> I installed: Python 2.7, atlas, lapack, blas, fftw3, numpy 1.8 via canopy
>>> 1.4.1 (and is working with python import numpy), boost 1.55, flex 2.5.35
>>> and bison 3.0.2 before performing the RDKit installation.
>>>
>>> I followed the procedure described here: https://www.mail-archive.com/
>>> rdkit-discuss@lists.sourceforge.net/msg01376.html
>>>
>>> Please find in attached document related files which describe my problem.
>>>
>>> Thanks a lot for you help.
>>>
>>> Best regards,
>>>
>>> Enrico Perspicace
>>>
>>>
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>
>
>
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