On 11/29/2016 11:56 AM, Chris Swain wrote:

> However I’ve found that the success is very much dependent on the
> fact 1 described by Greg, get all the structures standardised then comparison
using canonical SMILES or InChi seems to work fine.

+1. Essentially you need to get standardized representation of all the
properties you consider relevant and produce a unique hash of that.
Doesn't matter if it's a SHA-1 string or some graph-based magic or a
matrix voodoo. (String comparison is of course easier.)

-- 
Dimitri Maziuk
Programmer/sysadmin
BioMagResBank, UW-Madison -- http://www.bmrb.wisc.edu

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