Re: mysql server optimization

2009-12-15 Thread TianJing
yeah,it runs faster if without order clause,as it do not use filesort here.
because of the huge data,it takes lots of time to copy them to tmp table or
even to the tmp table on the disk when use filesort, It also led to the
higher io wait!  i am trying to increase the variable
'max_length_for_sort_data' to 8096,hope this can help mysql use the efficient
sorting algorithm,theoretically this can reduce the I / O, i am also trying
to use tmpfs filesystem as tmpdir,this can greatly improve the reading and
writing speed on the disk. hope these can help. do you hava any suggestions
on this?

these is only select operation in my database,and i have do some optimiztion
by 'myisamchk -aS' ,but the effect is not very good. i am sure that it will
be greate improved if we rewriting the select,but unfortunately, this sql is
inside the completed software, and i have no rights to rewrite it,so i have
the only way to optimiztion the mysql server!

thanks again for your help

all the best.

On Tue, Dec 15, 2009 at 9:59 PM, Daisley, John (Burton) <
john.dais...@llg.co.uk> wrote:

>  The 'order by' clause is forcing MySQL to use a temporary table; as a
> test could you try running the query without the order by clause? Does it
> run quicker? MySQL must use a temporary table if you 'group by' or 'order
> by' a column not contained in the first table of the select, sometimes you
> can get around this limitation just by rewriting the select. Give it a try,
> it can make a huge difference.
>
> Do the tables have a lot of insert,update, delete operations? If so it may
> be worth you running OPTIMIZE TABLE to rebuild indexes. Be warned it can
> take some time to complete and tables are locked whilst it runs. If you have
> slaves running you may want to add LOCAL to the OPTIMIZE TABLE statement so
> the operation does not run on your slaves.
>
> I'm stuck doing some other stuff at the mo but I will try and have a proper
> look at this later and will get back to you.
>
> Regards
>
> John Daisley
>
> Business Intelligence Developer - MySQL Database Administrator
> Inspired Gaming Group Plc
>
> Direct Dial +44 (0)1283 519244
> Telephone +44 (0)1283 512777 ext 2244
> Mobile +44 (0)7812 451238
>
>
>  --
> *From:* jingtian.seu...@gmail.com [mailto:jingtian.seu...@gmail.com] *On
> Behalf Of *TianJing
> *Sent:* 15 December 2009 12:43
> *To:* Daisley, John (Burton)
>
> *Cc:* mysql@lists.mysql.com
> *Subject:* Re: mysql server optimization
>
> yes,you are right,the longblob is already move to a separate table fdna,it
> is about 10Gb/database the fdata is about 30Gb/database ,the fgroup is about
> 10Gb/database.the MYI file is almost the same or much bigger than the MYD
> file.
>
> show create table for fdna is:
> | fdna  | CREATE TABLE `fdna` (
>   `fref` varchar(100) NOT NULL,
>   `foffset` int(10) unsigned NOT NULL,
>   `fdna` longblob,
>   PRIMARY KEY (`fref`,`foffset`)
> ) ENGINE=MyISAM DEFAULT CHARSET=latin1 |
>
> show create table for fdata is:
> | fdata | CREATE TABLE `fdata` (
>   `fid` int(11) NOT NULL AUTO_INCREMENT,
>   `fref` varchar(100) NOT NULL,
>   `fstart` int(10) unsigned NOT NULL,
>   `fstop` int(10) unsigned NOT NULL,
>   `fbin` double(20,6) NOT NULL,
>   `ftypeid` int(11) NOT NULL,
>   `fscore` float DEFAULT NULL,
>   `fstrand` enum('+','-') DEFAULT NULL,
>   `fphase` enum('0','1','2') DEFAULT NULL,
>   `gid` int(11) NOT NULL,
>   `ftarget_start` int(10) unsigned DEFAULT NULL,
>   `ftarget_stop` int(10) unsigned DEFAULT NULL,
>   PRIMARY KEY (`fid`),
>   UNIQUE KEY `fref` (`fref`,`fbin`,`fstart`,`fstop`,`ftypeid`,`gid`),
>   KEY `ftypeid` (`ftypeid`),
>   KEY `gid` (`gid`)
> ) ENGINE=MyISAM AUTO_INCREMENT=381002371 DEFAULT CHARSET=latin1 |
>
> show create for fgroup is:
> -+
> | fgroup | CREATE TABLE `fgroup` (
>   `gid` int(11) NOT NULL AUTO_INCREMENT,
>   `gclass` varchar(100) DEFAULT NULL,
>   `gname` varchar(100) DEFAULT NULL,
>   PRIMARY KEY (`gid`),
>   UNIQUE KEY `gclass` (`gclass`,`gname`)
> ) ENGINE=MyISAM AUTO_INCREMENT=240501186 DEFAULT CHARSET=latin1 |
>
> show  create for ftype is:
> | ftype | CREATE TABLE `ftype` (
>   `ftypeid` int(11) NOT NULL AUTO_INCREMENT,
>   `fmethod` varchar(100) NOT NULL,
>   `fsource` varchar(100) DEFAULT NULL,
>   PRIMARY KEY (`ftypeid`),
>   UNIQUE KEY `ftype` (`fmethod`,`fsource`),
>   KEY `fmethod` (`fmethod`),
>   KEY `fsource` (`fsource`)
> ) ENGINE=MyISAM AUTO_INCREMENT=16 DEFAULT CHARSET=latin1 |
>
>
> the index on fdata is :
> --+-+
> | Table | Non_unique | Key_name | Seq_in_index | Column_name | Collation |
> Cardinality | Sub_part | Packed | Null | Index_type | Comment |
>
> +---++--+--+-+---+-+--++--++-+
> | fdata |  0 | PRIMARY  |1 | fid | A
> |   463619315 | NULL | NULL   |  | BTREE  | |
> | fdata |  0 | fref |1 | fref|

MySQL 5.5.0 has been released

2009-12-15 Thread Joerg Bruehe
Dear MySQL users,


MySQL Server 5.5.0-m2, a new version of the popular Open Source
Database Management System, has been released.

The "-m2" suffix tells this is the second milestone according to our
"milestone" release model, also called "Betony".
You can read more about the release model and the planned milestones at

http://forge.mysql.com/wiki/Development_Cycle

The new features in this release are of beta quality. As with any
other pre-production release, caution should be taken when installing on
production level systems or systems with critical data.
For production level systems using 5.1, we would like to direct your
attention to the product description of MySQL Enterprise at:

   http://mysql.com/products/enterprise/

MySQL 5.5 is based on MySQL 5.4, which won't get any further updates.
So MySQL 5.5 includes several high-impact changes to address scalability
and performance issues in MySQL Server. These changes exploit advances
in hardware and CPU design and enable better utilization of existing
hardware.

For an overview of what's new in MySQL 5.5, please see the
section "What Is New in MySQL 5.5" below, or view it online at

   http://dev.mysql.com/doc/refman/5.5/en/mysql-nutshell.html

For information on installing MySQL 5.5.0 on new servers,
please see the MySQL installation documentation at

   http://dev.mysql.com/doc/refman/5.5/en/installing.html

For upgrading from previous MySQL releases, please see the
important upgrade considerations at

   http://dev.mysql.com/doc/mysql-5.5-features/en/index.html

Some other pointers you might like to follow are

   http://dev.mysql.com/doc/refman/5.5/en/configuration-changes-5-5.html

http://dev.mysql.com/doc/refman/5.5/en/upgrading-from-previous-series.html

MySQL Server is available in source and binary form for a
number of platforms from our download pages at

   http://dev.mysql.com/downloads/

Not all mirror sites may be up to date at this point in
time, so if you can't find this version on some mirror,
please try again later or choose another download site.

We welcome and appreciate your feedback, bug reports, bug
fixes, patches, etc.:

   http://forge.mysql.com/wiki/Contributing

Following the "What Is New" section, this mail lists the important
changes in the MySQL source code of MySQL 5.5.0.
The complete list of all "Bugs Fixed" is not included, because it would
exceed the length restrictions imposed on these mailing lists.
It may be viewed online at

  http://dev.mysql.com/doc/refman/5.5/en/news-5-5-0.html

Enjoy!


On behalf of the MySQL Build Team at Sun Microsystems:
Jörg Brühe,
Senior Production Engineer

  -

What Is New in MySQL 5.5


The following features have been added to MySQL 5.5:

 * Support for an interface for semisynchronous replication:
   A commit performed on the master side blocks before returning
   to the session that performed the transaction until at least
   one slave acknowledges that it has received and logged the events
   for the transaction.
   Semisynchronous replication is implemented through an optional
   plugin component. See Section 16.2.8, "Semisynchronous Replication"

 * Support for the SQL standard SIGNAL and RESIGNAL statements.
   See Section 12.8.8, "SIGNAL and RESIGNAL".

 * Enhancements to XML functionality, including a new LOAD XML
   statement.

 * Two new types of user-defined partitioning:
   RANGE COLUMNS partitioning is an extension to RANGE partitioning;
   LIST COLUMNS partitioning is an extension to LIST partitioning.
   Each of these extensions provides two enhancements to MySQL
   partitioning capabilities:

   1. It is possible to define partitioning ranges or lists based on
  DATE, DATETIME, or string values (such as CHAR or VARCHAR).

  You can also define ranges or lists based on multiple column
  values when partitioning tables by RANGE COLUMNS or LIST COLUMNS,
  respectively. Such a range or list may refer to up to 16 columns.

   2. For tables defined using these partitioning types, partition
  pruning can now optimize queries with WHERE conditions that use
  multiple comparisons between (different) column values and
  constants, such as
  a = 10 AND b > 5 or a < "2005-11-25" AND b = 10 AND c = 50.

  For more information, see Section 17.2.1, "RANGE Partitioning",
  and Section 17.2.2, "LIST Partitioning".

 * It is now possible to delete all rows from one or more partitions
   of a partitioned table using the ALTER TABLE ... TRUNCATE
   PARTITION statement. Executing the statement deletes rows without
   affecting the structure of the table. The partitions named in the
   TRUNCATE PARTITION clause do not have to be contiguous.

 * Key caches are now supported for indexes on partitioned MyISAM
   tables, using the CACHE INDEX and LOAD INDEX INTO CACHE statements.
   In addition, a key cache can be defined for and loaded with indexes
   from an entire partitioned table, or for one or more partitions.

 * The TO_

Re: Return row even if nothing found

2009-12-15 Thread Jesper Wisborg Krogh
On Wed, 16 Dec 2009 07:39:09 Cantwell, Bryan wrote:
> I have a situation where I need to always get a row returned even if no
> match is in the table (only 1 or many rows are acceptable).
>
> I can use:
> select a, b, c from mytable where a = 'yarp';
> and might get 20 rows if there are matches, but I at least need 1 default
> row back... using :
> select ifnull(a,'NOTHING') as a, ifnull(b, 'NOTHING') b, ifnull(c,
> 'NOTHING') c from mytable where a = 'yarp'; just returns nothing...
>
> Anything I can add in here to have a recordset of at least (nothing,
> nothing, nothing) ?

You can do something like:

SELECT mytable.*
   FROM (SELECT 1) AS dummy
 LEFT JOIN mytable ON id = 'something that does not exists';

It's not pretty, but it might do the trick for you.

- Jesper

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Re: Return row even if nothing found

2009-12-15 Thread Shawn Green

Cantwell, Bryan wrote:

I have a situation where I need to always get a row returned even if no match 
is in the table (only 1 or many rows are acceptable).

I can use:
select a, b, c from mytable where a = 'yarp';
and might get 20 rows if there are matches, but I at least need 1 default row 
back...
using :
select ifnull(a,'NOTHING') as a, ifnull(b, 'NOTHING') b, ifnull(c, 'NOTHING') c 
from mytable where a = 'yarp';
just returns nothing... 


Anything I can add in here to have a recordset of at least (nothing, nothing, 
nothing) ?


Sorry, no. The database can only give you data that it contains. No rows 
of data = no rows of results. This is a condition you will need to test 
for in your application and apply the appropriate adjustments to your code.


However, if mytable is the child to another table (say myparent), then 
you can query on ... FROM myparent LEFT JOIN mytable ... and if there 
were no matches on the matching column then mytable would have all NULL 
values for its columns. Is that something you can work with?

http://dev.mysql.com/doc/refman/5.1/en/join.html

--
Shawn Green, MySQL Senior Support Engineer
Sun Microsystems, Inc.
Office: Blountville, TN



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Return row even if nothing found

2009-12-15 Thread Cantwell, Bryan
I have a situation where I need to always get a row returned even if no match 
is in the table (only 1 or many rows are acceptable).

I can use:
select a, b, c from mytable where a = 'yarp';
and might get 20 rows if there are matches, but I at least need 1 default row 
back...
using :
select ifnull(a,'NOTHING') as a, ifnull(b, 'NOTHING') b, ifnull(c, 'NOTHING') c 
from mytable where a = 'yarp';
just returns nothing... 

Anything I can add in here to have a recordset of at least (nothing, nothing, 
nothing) ?
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RE: Count records in join

2009-12-15 Thread Gavin Towey
Hi Miguel,

You'll need to use LEFT JOIN, that will show all records that match and a row 
in the second table will all values NULL where there is no match.  Then you 
find all those rows that have no match in your WHERE clause.

Regards,
Gavin Towey

-Original Message-
From: Miguel Vaz [mailto:pagong...@gmail.com]
Sent: Tuesday, December 15, 2009 10:43 AM
To: mysql@lists.mysql.com
Subject: Count records in join

Hi,

I am stuck with a suposedly simple query:

- i have two tables (:

PROGS
id_prog
name

EVENTS
id
id_prog
name

How can i list all records from PROGS with a sum of how many events each
have? I want to find the progs that are empty.

I remember something about using NULL, but i cant remember. :-P

Thanks.

MV

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Count records in join

2009-12-15 Thread Miguel Vaz
Hi,

I am stuck with a suposedly simple query:

- i have two tables (:

PROGS
id_prog
name

EVENTS
id
id_prog
name

How can i list all records from PROGS with a sum of how many events each
have? I want to find the progs that are empty.

I remember something about using NULL, but i cant remember. :-P

Thanks.

MV


Re: How to not lock anything?

2009-12-15 Thread Perrin Harkins
On Tue, Dec 15, 2009 at 11:58 AM, Keith Murphy  wrote:
> Writers do block readers. Just at the row level vs the table level of
> MyISAM. It's just much less likely for writers to block readers.

No, they don't.  Not unless you use an extreme isolation level.
InnoDB uses multi-version concurrency to allow readers to work on the
previous version while writers are updating.
http://dev.mysql.com/doc/refman/5.1/en/innodb-consistent-read.html

- Perrin

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Re: How to not lock anything?

2009-12-15 Thread Keith Murphy
Writers do block readers. Just at the row level vs the table level of
MyISAM. It's just much less likely for writers to block readers.

keith

On Tue, Dec 15, 2009 at 11:57 AM, Perrin Harkins  wrote:

> On Mon, Dec 14, 2009 at 8:32 PM, D. Dante Lorenso 
> wrote:
> > I have an "items" table that is heavily updated with 40 million records
> > every 1 or 2 days and I need all those items indexed so they can be
> > searched.  The problem that I'm having is that the table is constantly
> > locked because an insert or delete is being performed.
> >
> > I am playing with InnoDB vs MyIsam and have been trying to figure out how
> to
> > get the best performance.
>
> Problem solved: use InnoDB.  Writers don't block readers and vice versa.
>
> - Perrin
>
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> MySQL General Mailing List
> For list archives: http://lists.mysql.com/mysql
> To unsubscribe:
> http://lists.mysql.com/mysql?unsub=bmur...@paragon-cs.com
>
>


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Paragon Consulting Services
850-637-3877


Re: How to not lock anything?

2009-12-15 Thread Perrin Harkins
On Mon, Dec 14, 2009 at 8:32 PM, D. Dante Lorenso  wrote:
> I have an "items" table that is heavily updated with 40 million records
> every 1 or 2 days and I need all those items indexed so they can be
> searched.  The problem that I'm having is that the table is constantly
> locked because an insert or delete is being performed.
>
> I am playing with InnoDB vs MyIsam and have been trying to figure out how to
> get the best performance.

Problem solved: use InnoDB.  Writers don't block readers and vice versa.

- Perrin

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Re: Help saving MySQL

2009-12-15 Thread upscope
Michael Widenius wrote:

> 
> Hi!
> 
>> "Facundo" == Facundo Garat  writes:
> 
> Facundo> i don't really thinks this is about open source or not.
> 
> Agree, this has to do about competition and that Oracle, the leader
> in revenue for databases are trying to buy MySQL, the leader in
> users just to kill it off.
> 
> Facundo> MySQL became more closed when Sun bought it and while i
> think that Facundo> Oracle will try to get this even more closed IMO
> it's time to fork it as Facundo> a really open source project. Monty
> could lead this. The are a lot of Facundo> "forks" around that make
> MySQL even better that it is from SUN.
> 
> I have already done a fork, MariaDB. This was done to engage the
> community that MySQL AB and Sun has been neglecting into MySQL
> development.
> 
> The problem with a fork of an infrastructure program like GPL is
> that it can only survive if the owner of the copyright has good
> intentions, like Sun has.
> 
> With Oracle as a copyright owner, there is very little chance for a
> fork to survice. I have written an analyse of this at:
> http://monty-says.blogspot.com/2009/10/importance-of-license-model-
of-mysql-or.html
> 
> The promises that Oracle has done regarding MySQL are not enough to
> protect MySQL from being killed as an Open Source project; When you
> analyse them, they are actually promising very little now and
> nothing after 5 years!
> 
> It's still not too late to save MySQL and everyone that is using
> MySQL can help making a real difference.
> Please visit
> http://monty-says.blogspot.com/2009/12/help-saving-mysql.html
> and write a message to EC!
> 
> Regards,
> Monty
I really agree with you. Even though the dumb regulators in my country 
refuse to prevent this purchase. I am really worried about OpenOffice 
and VirtualBox also. I've used MySQL since my system ran Windows ME, 
even though it was not supposed to run under ME. I have been 
exclusively Linux (openSUSE) since 1999. I only have VirtualBox so i 
can run TurboTax once a year. 

I've worked with oracle and I would never trust them.

Can your fork run concurently with MySQl and what is the link to it?

I did send an email to the EU even though it will not help this 
country.
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Re: the mystery of the missing mysql.sock file

2009-12-15 Thread Keith Murphy
Thanks Johan. Yes, it shows the mysqld holding it open. Not suprising really
I guess. I did check the cron jobs and the history file searching for
something/someone who deleted it, but didn't find anything. Still, that is
what it looks like happend. I will move the sock file to /var/run/mysql so
it is out of the way.

thanks,

keith

On Tue, Dec 15, 2009 at 11:00 AM, Johan De Meersman wrote:

> Presumably someone deleted it :-) You can try an 'lsof -U |grep mysql' to
> see if any processes still have it open. If the mysqld process still has it
> open, it's probably not the server.
>
> Why do you keep it in /tmp, btw ? My guess would be that someone (or some
> process) decided it was time to clean /tmp out.
>
>
> On Tue, Dec 15, 2009 at 4:46 PM, Keith Murphy wrote:
>
>> Take one perfectly functional production server running 5.0.77. It has
>> been
>> up and running under load for quite some time. I am using xtrabackup for
>> backups and suddenly three or four days ago backup stop running.
>>
>> Investigation shows that the socket file '/tmp/mysql.sock' is no longer
>> there. The mysql server itself is still functioning .. you can specify
>> --host=localhost instead of --socket=/tmp/mysql.sock so the mysql client
>> uses tcp/ip instead of the socket file to connect to the server.
>>
>>
>>   - Permissions did not change on the /tmp directory..I checked.
>>   - There are no errors in the .err log.
>>   - No cron jobs clearing out /tmp.
>>   - SHOW VARIABLES LIKE '%sock%' displays the proper socket location
>>
>>
>>
>> Any thoughts? I have seen this type of thing occasionally before, but
>> never
>> taken the time to really investigate. I would just restart the server. I
>> will end up having to do so in this case, but I would really like to find
>> out WHY this happened. Is this is bug in the server code? I can't come up
>> with any other explanation. I would love for this to be explainable!
>>
>> thanks,
>>
>> keith
>>
>> --
>> Chief Training Officer
>> Paragon Consulting Services
>> 850-637-3877
>>
>
>


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Re: the mystery of the missing mysql.sock file

2009-12-15 Thread Johan De Meersman
Presumably someone deleted it :-) You can try an 'lsof -U |grep mysql' to
see if any processes still have it open. If the mysqld process still has it
open, it's probably not the server.

Why do you keep it in /tmp, btw ? My guess would be that someone (or some
process) decided it was time to clean /tmp out.

On Tue, Dec 15, 2009 at 4:46 PM, Keith Murphy wrote:

> Take one perfectly functional production server running 5.0.77. It has been
> up and running under load for quite some time. I am using xtrabackup for
> backups and suddenly three or four days ago backup stop running.
>
> Investigation shows that the socket file '/tmp/mysql.sock' is no longer
> there. The mysql server itself is still functioning .. you can specify
> --host=localhost instead of --socket=/tmp/mysql.sock so the mysql client
> uses tcp/ip instead of the socket file to connect to the server.
>
>
>   - Permissions did not change on the /tmp directory..I checked.
>   - There are no errors in the .err log.
>   - No cron jobs clearing out /tmp.
>   - SHOW VARIABLES LIKE '%sock%' displays the proper socket location
>
>
>
> Any thoughts? I have seen this type of thing occasionally before, but never
> taken the time to really investigate. I would just restart the server. I
> will end up having to do so in this case, but I would really like to find
> out WHY this happened. Is this is bug in the server code? I can't come up
> with any other explanation. I would love for this to be explainable!
>
> thanks,
>
> keith
>
> --
> Chief Training Officer
> Paragon Consulting Services
> 850-637-3877
>


Re: How to not lock anything?

2009-12-15 Thread mos

At 07:32 PM 12/14/2009, you wrote:

All,

I am using MySQL currently, but am starting to think that maybe I don't 
really need to use an RDBMS.  The data I am storing ends up getting 
indexed with Sphinx because I have full-text indexes for about 40 million 
records.


I have an "items" table that is heavily updated with 40 million records 
every 1 or 2 days and I need all those items indexed so they can be 
searched.  The problem that I'm having is that the table is constantly 
locked because an insert or delete is being performed.


I am playing with InnoDB vs MyIsam and have been trying to figure out how 
to get the best performance.  I actually don't care about dirty reads, 
however, and wouldn't mind if all the 40 mm records could be 
read/inserted/updated/deleted without any locking at all.  Are there known 
solutions for the kind of storage I am looking for?  Anyone have any 
pointers?  Is there a MySQL Storage Engine designed for this kind of 
usage, or is there a another server that is commonly used along with MySQL 
for this type of thing?


-- Dante



Dante,
   Here are a couple of recommendation for a MyISAM table.

1) Optimize the table. This gets rid off all of the holes left by deleted 
records. Then when rows are inserted it does NOT use a lock on the table.
2) Instead of actually deleting the rows, update a column Deleted='Y' so 
you don't physically delete the row because this would cause #1 to go back 
to using table locks when rows are inserted. If you can delay flagging 
these rows as deleted for a minute or so, then update these rows to 
Deleted="Y" every few minutes. This means only one lock to the table for 
processing hundreds of rows. You can also look into Low Priority updates. 
See http://dev.mysql.com/doc/refman/5.1/en/update.html
3) At night, either delete the rows with "Deleted=Y" and optimize the table 
or copy the table without the "Deleted=Y" to a new table. For 20 million 
rows this should take only a couple of minutes on a fast machine.
4) A little used feature of MyISAM table is the Handler command. It is more 
difficult to use because it is low level, but it allows you to read dirty 
rows from a table without waiting for locks.  See 
http://dev.mysql.com/doc/refman/5.1/en/handler.html. It does accept a Where 
clause and can return the rows in index order.


Hope this helps.

Mike



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972-333-4139


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the mystery of the missing mysql.sock file

2009-12-15 Thread Keith Murphy
Take one perfectly functional production server running 5.0.77. It has been
up and running under load for quite some time. I am using xtrabackup for
backups and suddenly three or four days ago backup stop running.

Investigation shows that the socket file '/tmp/mysql.sock' is no longer
there. The mysql server itself is still functioning .. you can specify
--host=localhost instead of --socket=/tmp/mysql.sock so the mysql client
uses tcp/ip instead of the socket file to connect to the server.


   - Permissions did not change on the /tmp directory..I checked.
   - There are no errors in the .err log.
   - No cron jobs clearing out /tmp.
   - SHOW VARIABLES LIKE '%sock%' displays the proper socket location



Any thoughts? I have seen this type of thing occasionally before, but never
taken the time to really investigate. I would just restart the server. I
will end up having to do so in this case, but I would really like to find
out WHY this happened. Is this is bug in the server code? I can't come up
with any other explanation. I would love for this to be explainable!

thanks,

keith

-- 
Chief Training Officer
Paragon Consulting Services
850-637-3877


RE: sql file system + optimization

2009-12-15 Thread John Daisley
Yes, you can symlink it. How much performance benefit you get will depend on 
hardware and traffic.

===

John Daisley

MySQL 5.0 Certified Database Administrator (CMDBA)
MySQL 5.0 Certified Developer
Cognos BI Developer

Telephone: +44(0)1283 537111
Mobile: +44(0)7812 451238
Email: john.dais...@butterflysystems.co.uk

===

Sent via HP IPAQ mobile device

-Original Message-
From: Steven Staples 
Sent: 15 December 2009 14:37
To: mysql@lists.mysql.com
Subject: sql file system + optimization

Ok... in the file system, my MySQL files are located in /var/lib/mysql/
 I have a database (lets say 'test') so it gets its own directory
 /var/lib/mysql/test/
 Now, all the tables go in this folder. (I know, we *should* all know
 this...)

 if the database is on another disk, could it increase performance if this
 was a large database? If so, could I just
 symlink the test/ directory to another raid array to increase performance?
 Or would the increase be negligible?


 Steven Staples




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 To unsubscribe:    
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sql file system + optimization

2009-12-15 Thread Steven Staples
Ok... in the file system, my MySQL files are located in /var/lib/mysql/
I have a database (lets say 'test') so it gets its own directory
/var/lib/mysql/test/
Now, all the tables go in this folder. (I know, we *should* all know
this...)

if the database is on another disk, could it increase performance if this
was a large database? If so, could I just 
symlink the test/ directory to another raid array to increase performance?
Or would the increase be negligible?


Steven Staples




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RE: mysql server optimization

2009-12-15 Thread Daisley, John (Burton)
The 'order by' clause is forcing MySQL to use a temporary table; as a
test could you try running the query without the order by clause? Does
it run quicker? MySQL must use a temporary table if you 'group by' or
'order by' a column not contained in the first table of the select,
sometimes you can get around this limitation just by rewriting the
select. Give it a try, it can make a huge difference.
 
Do the tables have a lot of insert,update, delete operations? If so it
may be worth you running OPTIMIZE TABLE to rebuild indexes. Be warned it
can take some time to complete and tables are locked whilst it runs. If
you have slaves running you may want to add LOCAL to the OPTIMIZE TABLE
statement so the operation does not run on your slaves.
 
I'm stuck doing some other stuff at the mo but I will try and have a
proper look at this later and will get back to you.
 
Regards



John Daisley

Business Intelligence Developer - MySQL Database Administrator
Inspired Gaming Group Plc

Direct Dial +44 (0)1283 519244
Telephone +44 (0)1283 512777 ext 2244


Mobile +44 (0)7812 451238
 



From: jingtian.seu...@gmail.com [mailto:jingtian.seu...@gmail.com] On
Behalf Of TianJing
Sent: 15 December 2009 12:43
To: Daisley, John (Burton)
Cc: mysql@lists.mysql.com
Subject: Re: mysql server optimization


yes,you are right,the longblob is already move to a separate table
fdna,it is about 10Gb/database the fdata is about 30Gb/database ,the
fgroup is about 10Gb/database.the MYI file is almost the same or much
bigger than the MYD file.

show create table for fdna is:
| fdna  | CREATE TABLE `fdna` (
  `fref` varchar(100) NOT NULL,
  `foffset` int(10) unsigned NOT NULL,
  `fdna` longblob,
  PRIMARY KEY (`fref`,`foffset`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 |

show create table for fdata is:
| fdata | CREATE TABLE `fdata` (
  `fid` int(11) NOT NULL AUTO_INCREMENT,
  `fref` varchar(100) NOT NULL,
  `fstart` int(10) unsigned NOT NULL,
  `fstop` int(10) unsigned NOT NULL,
  `fbin` double(20,6) NOT NULL,
  `ftypeid` int(11) NOT NULL,
  `fscore` float DEFAULT NULL,
  `fstrand` enum('+','-') DEFAULT NULL,
  `fphase` enum('0','1','2') DEFAULT NULL,
  `gid` int(11) NOT NULL,
  `ftarget_start` int(10) unsigned DEFAULT NULL,
  `ftarget_stop` int(10) unsigned DEFAULT NULL,
  PRIMARY KEY (`fid`),
  UNIQUE KEY `fref` (`fref`,`fbin`,`fstart`,`fstop`,`ftypeid`,`gid`),
  KEY `ftypeid` (`ftypeid`),
  KEY `gid` (`gid`)
) ENGINE=MyISAM AUTO_INCREMENT=381002371 DEFAULT CHARSET=latin1 |

show create for fgroup is:
-+
| fgroup | CREATE TABLE `fgroup` (
  `gid` int(11) NOT NULL AUTO_INCREMENT,
  `gclass` varchar(100) DEFAULT NULL,
  `gname` varchar(100) DEFAULT NULL,
  PRIMARY KEY (`gid`),
  UNIQUE KEY `gclass` (`gclass`,`gname`)
) ENGINE=MyISAM AUTO_INCREMENT=240501186 DEFAULT CHARSET=latin1 |

show  create for ftype is:
| ftype | CREATE TABLE `ftype` (
  `ftypeid` int(11) NOT NULL AUTO_INCREMENT,
  `fmethod` varchar(100) NOT NULL,
  `fsource` varchar(100) DEFAULT NULL,
  PRIMARY KEY (`ftypeid`),
  UNIQUE KEY `ftype` (`fmethod`,`fsource`),
  KEY `fmethod` (`fmethod`),
  KEY `fsource` (`fsource`)
) ENGINE=MyISAM AUTO_INCREMENT=16 DEFAULT CHARSET=latin1 |


the index on fdata is :
--+-+
| Table | Non_unique | Key_name | Seq_in_index | Column_name | Collation
| Cardinality | Sub_part | Packed | Null | Index_type | Comment |
+---++--+--+-+--
-+-+--++--++-+
| fdata |  0 | PRIMARY  |1 | fid | A
|   463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |1 | fref| A
|   1 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |2 | fbin| A
|  229060 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |3 | fstart  | A
|   231809657 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |4 | fstop   | A
|   463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |5 | ftypeid | A
|   463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |6 | gid | A
|   463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  1 | ftypeid  |1 | ftypeid | A
|  15 | NULL | NULL   |  | BTREE  | |
| fdata |  1 | gid  |1 | gid | A
|   231809657 | NULL | NULL   |  | BTREE  | |

index for fgroup is:
+++--+--+-+-
--+-+--++--++-+
| Table  | Non_unique | Key_name | Seq_in_index | Column_name |
Collation | Cardinality | Sub_part | Packed | Null | I

Re: Help saving MySQL

2009-12-15 Thread Michael Widenius

Hi!

> "Facundo" == Facundo Garat  writes:

Facundo> i don't really thinks this is about open source or not.

Agree, this has to do about competition and that Oracle, the leader in
revenue for databases are trying to buy MySQL, the leader in users
just to kill it off.

Facundo> MySQL became more closed when Sun bought it and while i think that 
Facundo> Oracle will try to get this even more closed IMO it's time to fork it 
as 
Facundo> a really open source project. Monty could lead this. The are a lot of 
Facundo> "forks" around that make MySQL even better that it is from SUN.

I have already done a fork, MariaDB. This was done to engage the
community that MySQL AB and Sun has been neglecting into MySQL
development.

The problem with a fork of an infrastructure program like GPL is that
it can only survive if the owner of the copyright has good intentions,
like Sun has.

With Oracle as a copyright owner, there is very little chance for a
fork to survice. I have written an analyse of this at:
http://monty-says.blogspot.com/2009/10/importance-of-license-model-of-mysql-or.html

The promises that Oracle has done regarding MySQL are not enough to
protect MySQL from being killed as an Open Source project; When you
analyse them, they are actually promising very little now and nothing
after 5 years!

It's still not too late to save MySQL and everyone that is using MySQL
can help making a real difference.
Please visit
http://monty-says.blogspot.com/2009/12/help-saving-mysql.html
and write a message to EC!

Regards,
Monty

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Re: mysql server optimization

2009-12-15 Thread TianJing
yes,you are right,the longblob is already move to a separate table fdna,it
is about 10Gb/database the fdata is about 30Gb/database ,the fgroup is about
10Gb/database.the MYI file is almost the same or much bigger than the MYD
file.

show create table for fdna is:
| fdna  | CREATE TABLE `fdna` (
  `fref` varchar(100) NOT NULL,
  `foffset` int(10) unsigned NOT NULL,
  `fdna` longblob,
  PRIMARY KEY (`fref`,`foffset`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 |

show create table for fdata is:
| fdata | CREATE TABLE `fdata` (
  `fid` int(11) NOT NULL AUTO_INCREMENT,
  `fref` varchar(100) NOT NULL,
  `fstart` int(10) unsigned NOT NULL,
  `fstop` int(10) unsigned NOT NULL,
  `fbin` double(20,6) NOT NULL,
  `ftypeid` int(11) NOT NULL,
  `fscore` float DEFAULT NULL,
  `fstrand` enum('+','-') DEFAULT NULL,
  `fphase` enum('0','1','2') DEFAULT NULL,
  `gid` int(11) NOT NULL,
  `ftarget_start` int(10) unsigned DEFAULT NULL,
  `ftarget_stop` int(10) unsigned DEFAULT NULL,
  PRIMARY KEY (`fid`),
  UNIQUE KEY `fref` (`fref`,`fbin`,`fstart`,`fstop`,`ftypeid`,`gid`),
  KEY `ftypeid` (`ftypeid`),
  KEY `gid` (`gid`)
) ENGINE=MyISAM AUTO_INCREMENT=381002371 DEFAULT CHARSET=latin1 |

show create for fgroup is:
-+
| fgroup | CREATE TABLE `fgroup` (
  `gid` int(11) NOT NULL AUTO_INCREMENT,
  `gclass` varchar(100) DEFAULT NULL,
  `gname` varchar(100) DEFAULT NULL,
  PRIMARY KEY (`gid`),
  UNIQUE KEY `gclass` (`gclass`,`gname`)
) ENGINE=MyISAM AUTO_INCREMENT=240501186 DEFAULT CHARSET=latin1 |

show  create for ftype is:
| ftype | CREATE TABLE `ftype` (
  `ftypeid` int(11) NOT NULL AUTO_INCREMENT,
  `fmethod` varchar(100) NOT NULL,
  `fsource` varchar(100) DEFAULT NULL,
  PRIMARY KEY (`ftypeid`),
  UNIQUE KEY `ftype` (`fmethod`,`fsource`),
  KEY `fmethod` (`fmethod`),
  KEY `fsource` (`fsource`)
) ENGINE=MyISAM AUTO_INCREMENT=16 DEFAULT CHARSET=latin1 |


the index on fdata is :
--+-+
| Table | Non_unique | Key_name | Seq_in_index | Column_name | Collation |
Cardinality | Sub_part | Packed | Null | Index_type | Comment |
+---++--+--+-+---+-+--++--++-+
| fdata |  0 | PRIMARY  |1 | fid | A |
463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |1 | fref| A
|   1 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |2 | fbin| A
|  229060 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |3 | fstart  | A |
231809657 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |4 | fstop   | A |
463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |5 | ftypeid | A |
463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  0 | fref |6 | gid | A |
463619315 | NULL | NULL   |  | BTREE  | |
| fdata |  1 | ftypeid  |1 | ftypeid | A
|  15 | NULL | NULL   |  | BTREE  | |
| fdata |  1 | gid  |1 | gid | A |
231809657 | NULL | NULL   |  | BTREE  | |

index for fgroup is:
+++--+--+-+---+-+--++--++-+
| Table  | Non_unique | Key_name | Seq_in_index | Column_name | Collation |
Cardinality | Sub_part | Packed | Null | Index_type | Comment |
+++--+--+-+---+-+--++--++-+
| fgroup |  0 | PRIMARY  |1 | gid | A
|   232212341 | NULL | NULL   |  | BTREE  | |
| fgroup |  0 | gclass   |1 | gclass  | A
|   5 | NULL | NULL   | YES  | BTREE  | |
| fgroup |  0 | gclass   |2 | gname   | A
|   232212341 | NULL | NULL   | YES  | BTREE  | |


the EXPLAIN EXTENDED for the query is :
++-+++---+-+-+--+--+--+--+
| id | select_type | table  | type   | possible_keys |
key | key_len | ref  | rows | filtered |
Extra|
++-+++---+-+-+--+--+--+--+
|  1 | SIMPLE  | fdata  | range  | fref,ftypeid,gid  |
fref| 114 | NULL |8 |75.00 | Using where;
Using temporary;

Bug fixes and MySQL versions/releases

2009-12-15 Thread Radoulov, Dimitre

Hi all,
I was informed by our security team about a recent attack attempts 
related to the following  MySQL issue/bug:


MySQL_Check_Scramble_Auth_Bypass (see tinyurl.com/y8vjbmm fro more info):

Systems Affected: MySQL 4.1 prior to 4.1.3, and MySQL 5.0.


We have MySQL Server 5.0.45 on RHEL 5.3, how can I check if our version 
5.0.45 is patched (apart from  looking in the source code)?




Regards
Dimitre


RE: mysql server optimization

2009-12-15 Thread Daisley, John (Burton)
I'm fairly sure that the longblob column will prevent MySQL from being able to 
use 'in memory temp tables' regardless of whether it is included in the SELECT. 
In an ideal world I would move that longblob to a separate table.

How big are the tables fdata,ftype,fgroup? Can you post the results of EXPLAIN 
EXTENDED for the query you posted? Can you also post the output of 'SHOW CREATE 
TABLE' for the tables fdata,ftype,fgroup?



John Daisley 

Business Intelligence Developer - MySQL Database Administrator
Inspired Gaming Group Plc 

Direct Dial +44 (0)1283 519244
Telephone +44 (0)1283 512777 ext 2244
Mobile +44 (0)7812 451238

Email john.dais...@llg.co.uk

www.inspiredgaminggroup.com 


-Original Message-
From: TianJing 
Sent: 15 December 2009 10:28
To: mg_s...@hotmail.com
Cc: mysql@lists.mysql.com
Subject: Re: mysql server optimization

i use MyISAM storage,the MYI file is more than 500Gb. most of the sql is  
select with many 'and','or','order by',for example:

 SELECT
 
fref,fstart,fstop,fsource,fmethod,fscore,fstrand,fphase,gclass,gname,ftarget_start,ftarget_stop,fdata.fid,fdata.gid
  FROM fdata,ftype,fgroup
  WHERE   fgroup.gid = fdata.gid
   AND ftype.ftypeid = fdata.ftypeid
  AND fdata.fref='chr18'
     AND (fbin='100'
  OR fbin between '10' and '10'
  OR fbin between '.999' and '1'
  OR fbin between '1000.049' and '1000.051'
  OR fbin between '100.549' and '100.551'
  OR fbin between '10.0005529' and '10.0005531'
  OR fbin between '1.0055379' and '1.0055381'
  OR fbin between '1000.0553839' and '1000.0553841')
     AND fdata.fstop>='55384910' AND fdata.fstart<='55384989'
     AND  ((fmethod = 'genotype' AND fsource = 'SoapSNP') OR (fmethod =  
'gt_novel' AND fsource = 'SoapSNP') OR (fmethod = 'SNP' AND fsource =
 'MutaGeneSys_06JUNE07') OR (fmethod = 'snp' AND fsource = 'HapMap_gt') OR  
(fmethod = 'similarity') OR (fmethod = 'HSP') OR (fmethod = 'match') OR  
(fmethod = 'CDS' AND fsource = 'UCSC_1') OR (fmethod = '5\'-UTR' AND fsource  = 
'UCSC_1') OR (fmethod = '3\'-UTR' AND fsource = 'UCSC_1') OR (fmethod =  
'transcription_start_site' AND fsource = 'UCSC_1') OR (fmethod =  'polyA_site' 
AND fsource = 'UCSC_1') OR (fmethod = 'UTR' AND fsource =
 'UCSC_1') OR (fmethod = 'five_prime_untranslated_region' AND fsource =
 'UCSC_1') OR (fmethod = 'three_prime_untranslated_region' AND fsource =
 'UCSC_1') OR (fmethod = 'five_prime_UTR' AND fsource = 'UCSC_1') OR (fmethod  
= 'three_prime_UTR' AND fsource = 'UCSC_1') OR (fmethod = 'exon' AND fsource  = 
'UCSC_1') OR (fmethod = 'mRNA' AND fsource = 'UCSC_1'))
  ORDER BY fgroup.gname;

 there is a longblob column in the table, but even i do not  select this blob  
column, the i/o is still higher.

 i have 16G memery in total, the oracle database take 1/4 of them, i try to  
increasing the key_buffer_size to 2048M and tmp_table_size to 1024M,but the  
machine crashed out of memery in one day,the mysqld takes over 18G memery!

 i use show profiles find that 'sending data' and 'copying to tmp table'
 takes lots of time.

 On Tue, Dec 15, 2009 at 5:36 PM, John Daisley  wrote:

 > What kind of queries are being run and what type of data is stored?
 >
 > There are a number of factors which causes MySQL to use on disk temporary  > 
 > tables instead of in memory tables. (If there a BLOB or TEXT columns in the  
 > > table for example).
 >
 > As a starting point you could (if you have the memory in your box) try  > 
 > increasing the values for tmp_table_size and max_heap_size, these control  > 
 > how large an in-memory temp table can grow before it is converted to an on  
 > > disk temp table.
 >
 > Regards
 > John
 >
 > ===
 >
 > John Daisley
 >
 > MySQL 5.0 Certified Database Administrator (CMDBA)  > MySQL 5.0 Certified 
 > Developer  > Cognos BI Developer  >  > Telephone: +44(0)1283 537111  > 
 > Mobile: +44(0)7812 451238  > Email: john.dais...@butterflysystems.co.uk
 >
 > ===
 >
 > Sent via HP IPAQ mobile device
 >
 > -Original Message-
 > From: TianJing   > Sent: 15 December 2009 03:08  
 > > To: mysql@lists.mysql.com  > Subject: mysql server optimization  >  > Dear 
 > all,  >  >  i am nowing having a problem with the mysql server optimization, 
 > i have 20  >  database on a server,each database is about 80Gb,the sql seems 
 > very  >  slow,almost > 5s.and the server i/o is so high,when i check the  >  
 > processlist,the 'copying to tmp table' state  takes a long time.
 >
 >  i have already use index,but the sql use lots of 'and','or','order by',  > 
 >and  >  for some reason i can not optimization the sql,i hope to do some  >  
 >optimization on mysql server to mitigate this phenomenon,could any one  > 
 >give  >  me some suggestion?
 >
 >  thanks.
 >
 >  my server is linux,8CPU and 4G memery,the my.cnf is:
 >
 >  [mysqld]
 >  port    = 3306
 >  skip-locking
 >  skip-name-resolve

Re: mysql server optimization

2009-12-15 Thread TianJing
i use MyISAM storage,the MYI file is more than 500Gb. most of the sql is
select with many 'and','or','order by',for example:

SELECT
fref,fstart,fstop,fsource,fmethod,fscore,fstrand,fphase,gclass,gname,ftarget_start,ftarget_stop,fdata.fid,fdata.gid
 FROM fdata,ftype,fgroup
 WHERE   fgroup.gid = fdata.gid
  AND ftype.ftypeid = fdata.ftypeid
 AND fdata.fref='chr18'
AND (fbin='100'
 OR fbin between '10' and '10'
 OR fbin between '.999' and '1'
 OR fbin between '1000.049' and '1000.051'
 OR fbin between '100.549' and '100.551'
 OR fbin between '10.0005529' and '10.0005531'
 OR fbin between '1.0055379' and '1.0055381'
 OR fbin between '1000.0553839' and '1000.0553841')
AND fdata.fstop>='55384910' AND fdata.fstart<='55384989'
AND  ((fmethod = 'genotype' AND fsource = 'SoapSNP') OR (fmethod =
'gt_novel' AND fsource = 'SoapSNP') OR (fmethod = 'SNP' AND fsource =
'MutaGeneSys_06JUNE07') OR (fmethod = 'snp' AND fsource = 'HapMap_gt') OR
(fmethod = 'similarity') OR (fmethod = 'HSP') OR (fmethod = 'match') OR
(fmethod = 'CDS' AND fsource = 'UCSC_1') OR (fmethod = '5\'-UTR' AND fsource
= 'UCSC_1') OR (fmethod = '3\'-UTR' AND fsource = 'UCSC_1') OR (fmethod =
'transcription_start_site' AND fsource = 'UCSC_1') OR (fmethod =
'polyA_site' AND fsource = 'UCSC_1') OR (fmethod = 'UTR' AND fsource =
'UCSC_1') OR (fmethod = 'five_prime_untranslated_region' AND fsource =
'UCSC_1') OR (fmethod = 'three_prime_untranslated_region' AND fsource =
'UCSC_1') OR (fmethod = 'five_prime_UTR' AND fsource = 'UCSC_1') OR (fmethod
= 'three_prime_UTR' AND fsource = 'UCSC_1') OR (fmethod = 'exon' AND fsource
= 'UCSC_1') OR (fmethod = 'mRNA' AND fsource = 'UCSC_1'))
 ORDER BY fgroup.gname;

there is a longblob column in the table, but even i do not  select this blob
column, the i/o is still higher.

i have 16G memery in total, the oracle database take 1/4 of them, i try to
increasing the key_buffer_size to 2048M and tmp_table_size to 1024M,but the
machine crashed out of memery in one day,the mysqld takes over 18G memery!

i use show profiles find that 'sending data' and 'copying to tmp table'
takes lots of time.

On Tue, Dec 15, 2009 at 5:36 PM, John Daisley  wrote:

> What kind of queries are being run and what type of data is stored?
>
> There are a number of factors which causes MySQL to use on disk temporary
> tables instead of in memory tables. (If there a BLOB or TEXT columns in the
> table for example).
>
> As a starting point you could (if you have the memory in your box) try
> increasing the values for tmp_table_size and max_heap_size, these control
> how large an in-memory temp table can grow before it is converted to an on
> disk temp table.
>
> Regards
> John
>
> ===
>
> John Daisley
>
> MySQL 5.0 Certified Database Administrator (CMDBA)
> MySQL 5.0 Certified Developer
> Cognos BI Developer
>
> Telephone: +44(0)1283 537111
> Mobile: +44(0)7812 451238
> Email: john.dais...@butterflysystems.co.uk
>
> ===
>
> Sent via HP IPAQ mobile device
>
> -Original Message-
> From: TianJing 
> Sent: 15 December 2009 03:08
> To: mysql@lists.mysql.com
> Subject: mysql server optimization
>
> Dear all,
>
>  i am nowing having a problem with the mysql server optimization, i have 20
>  database on a server,each database is about 80Gb,the sql seems very
>  slow,almost > 5s.and the server i/o is so high,when i check the
>  processlist,the 'copying to tmp table' state  takes a long time.
>
>  i have already use index,but the sql use lots of 'and','or','order by',
> and
>  for some reason i can not optimization the sql,i hope to do some
>  optimization on mysql server to mitigate this phenomenon,could any one
> give
>  me some suggestion?
>
>  thanks.
>
>  my server is linux,8CPU and 4G memery,the my.cnf is:
>
>  [mysqld]
>  port= 3306
>  skip-locking
>  skip-name-resolve
>  key_buffer_size = 16M
>  max_allowed_packet = 1M
>  table_open_cache = 64
>  sort_buffer_size = 512M
>  net_buffer_length = 8K
>  read_buffer_size = 512K
>  read_rnd_buffer_size = 512M
>  myisam_sort_buffer_size = 8M
>  table_cache = 1024
>  log-bin=mysql-bin
>  binlog_format=mixed
>
>
>  --
>  Tianjing
>
>


-- 
Tianjing

Tel:0755-2527-3851
MSN:tianjing...@hotmail.com 


Re: How to not lock anything?

2009-12-15 Thread Jay Ess

D. Dante Lorenso wrote:

All,

I am using MySQL currently, but am starting to think that maybe I 
don't really need to use an RDBMS.  The data I am storing ends up 
getting indexed with Sphinx because I have full-text indexes for about 
40 million records.


I have an "items" table that is heavily updated with 40 million 
records every 1 or 2 days and I need all those items indexed so they 
can be searched.  The problem that I'm having is that the table is 
constantly locked because an insert or delete is being performed.


I am playing with InnoDB vs MyIsam and have been trying to figure out 
how to get the best performance.  I actually don't care about dirty 
reads, however, and wouldn't mind if all the 40 mm records could be 
read/inserted/updated/deleted without any locking at all.  Are there 
known solutions for the kind of storage I am looking for?  Anyone have 
any pointers?  Is there a MySQL Storage Engine designed for this kind 
of usage, or is there a another server that is commonly used along 
with MySQL for this type of thing?

Double buffering :
Have two identical tables.
Update to the non active and when ready make this table the active.
Now do the same updates to the old now nonactive table while the new 
active table can be read pretty much without disturbance.

Make the two tables reside on separate disks if you dont have enough IO.
Sure its dirty but it works.

If you entirally rebuild your datasets from scratch use this approach :
Create an empty table from live table definition (CREATE TABLE tmp 
SELECT * FROM livetable limit 0;)

Now rebuild your dataset to table tmp.
Drop live table.
Rename tmp table to live table name.



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RE: mysql server optimization

2009-12-15 Thread John Daisley
What kind of queries are being run and what type of data is stored?

There are a number of factors which causes MySQL to use on disk temporary 
tables instead of in memory tables. (If there a BLOB or TEXT columns in the 
table for example).

As a starting point you could (if you have the memory in your box) try 
increasing the values for tmp_table_size and max_heap_size, these control how 
large an in-memory temp table can grow before it is converted to an on disk 
temp table.

Regards
John

===

John Daisley

MySQL 5.0 Certified Database Administrator (CMDBA)
MySQL 5.0 Certified Developer
Cognos BI Developer

Telephone: +44(0)1283 537111
Mobile: +44(0)7812 451238
Email: john.dais...@butterflysystems.co.uk

===

Sent via HP IPAQ mobile device

-Original Message-
From: TianJing 
Sent: 15 December 2009 03:08
To: mysql@lists.mysql.com
Subject: mysql server optimization

Dear all,

 i am nowing having a problem with the mysql server optimization, i have 20
 database on a server,each database is about 80Gb,the sql seems very
 slow,almost > 5s.and the server i/o is so high,when i check the
 processlist,the 'copying to tmp table' state  takes a long time.

 i have already use index,but the sql use lots of 'and','or','order by', and
 for some reason i can not optimization the sql,i hope to do some
 optimization on mysql server to mitigate this phenomenon,could any one give
 me some suggestion?

 thanks.

 my server is linux,8CPU and 4G memery,the my.cnf is:

 [mysqld]
 port    = 3306
 skip-locking
 skip-name-resolve
 key_buffer_size = 16M
 max_allowed_packet = 1M
 table_open_cache = 64
 sort_buffer_size = 512M
 net_buffer_length = 8K
 read_buffer_size = 512K
 read_rnd_buffer_size = 512M
 myisam_sort_buffer_size = 8M
 table_cache = 1024
 log-bin=mysql-bin
 binlog_format=mixed


 --
 Tianjing


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RE: different type column and keys for EXPLAIN

2009-12-15 Thread Manish Ranjan
Thanks Sergey.

The query is much slower with "ref". Do you think if a composite index on
firstname and lastname would solve it? Table has 164+ million records which
makes me reluctant to create a new index due to the time required for index
creation unless I am pretty sure that the new index would work. 


-Original Message-
From: Sergey Petrunya [mailto:pser...@askmonty.org] 
Sent: Monday, December 14, 2009 5:58 PM
To: Manish Ranjan
Cc: mysql@lists.mysql.com
Subject: Re: different type column and keys for EXPLAIN

Manish,

On Mon, Dec 14, 2009 at 05:33:43PM +0530, Manish Ranjan wrote:
> I am using mysql 5.0.77 on RHEL 5.  Storage engine in MyISAM. 
> 
>  
> 
> Please refer to the below two statements. First query is checking for
> lastname 'clarke'  where as second query is checking for lastname 'clark'.
> Rest everything is same with these two queries. However, the explain
output
> shows "ref" for the first query and uses only one key for the first query
> whereas second query uses "index_merge" and both keys. 
> 
> ... 
> 
> What could be the problem here. Please help.

"ref" and "index_merge" are two possible plans for both of the queries. The
choice whether to use ref or index_merge depends on cost calculations,
which,
in turn, depends on estimates of numbers of records that one will get for
conditions in the WHERE clause. 

It seems that the storage engine reports different estimates for number of
matching records for lastname='clark' and lastname='clarke', and hence the
query plans are different. This is a normal situation.

Does that cause any problems for you? That is, do you observe that one of
the
queries is unccecessarily slow (i.e. much slower than you could make it to
run
by using some hint?)

BR
 Sergey
-- 
Sergey Petrunia, Software Developer
Monty Program AB, http://askmonty.org
Blog: http://s.petrunia.net/blog


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