lem fetching dependencies or a
problem caused by a package I depend on?
Thanks,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
em?
Best,
On Tue, 11-May-2021, at 20:15:24, Ramon Diaz-Uriarte wrote:
> Dear All,
>
> I package I maintain (OncoSimulR), which has not experienced any changes in
> the last week, has failed Install and Check (but not Build or Build bin) on
> Windows
> (https://bioconduc
eers,
> H.
>
> On 11/05/2021 16:38, Ramon Diaz-Uriarte wrote:
>> To partially answer myself, on looking more carefully, the INSTALL problem
>> seems to happen in the call to curl.exe (i.e., not in the R package
>> installation itself per se). It seems this failed
>>
al website: https://almeidasilvaf.github.io/home/
>
>
> [[alternative HTML version deleted]]
>
>
> [[alternative HTML version deleted]]
>
> ___
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/
case for at least a few days (weeks?). I can see no
obvious pattern, nor what could maintainers do to fix this.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
t yet available.
>
>
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Comprehensive Cancer Center
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
> __
w arm64 binaries so
> you should no longer need Xcode.
>
>
> Jennifer Wokaty
> they/them
> Bioconductor Core Team
> CUNY SPH
>
> [[alternative HTML version deleted]]
>
> ___
> Bioc-devel@r-project.org mailing list
> https://
er platforms there will be no consequences for remaining in the bioc
> ecosystem.
>
> On Tue, Oct 4, 2022 at 5:22 AM Ramon Diaz-Uriarte wrote:
>
> Dear All,
>
> It is unclear to me if the deadline of 28-October-2022 for "packages passing
> ‘‘R
> CMD build’’
hat
threw exceptions).
My implicit assumption was "As soon as the user sees the Unrecoverable
exception, they will not try to do a plot". But this is obviously not a good
way to do it, as I can see :-) . My bad.
Thanks a lot again.
Best,
R.
> Cheers,
>
> H.
>
>
> O
_________
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morc
On Sat, 17 Nov 2012 13:05:29 -0800,"Ryan C. Thompson"
wrote:
> On 11/17/2012 02:39 AM, Ramon Diaz-Uriarte wrote:
> > In addition to Steve's comment, is it really a good thing that "all code
> > stays the same."? I mean, multiple machines vs. multipl
oconductor in use, from the R NEWS file:
>
> • The default ‘version’ of Bioconductor for its packages has been
>changed to the upcoming 2.13, but this can be set by the
> environment variable R_BIOC_VERSION, e.g. in file Renviron.site.
>
> Martin Morgan,
>
moved to R-devel (I asked here because an identical question was dealt
with in this list).
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia
the
non-built vignetted (the one in /inst/doc) does not make it to /inst/doc in the
tar.gz.
> beneficial. Is the package publicly available somewhere? That may be
> useful for other people.
>
Sure, it is ADaCGH2 in BioC:
http://www.bioconductor.org/packages/2.13/bioc/html/ADaCGH2.html
Dear Martin,
Thanks for your detailed reply.
Best,
R.
mtmor...@fhcrc.org writes:
> On 09/17/2013 01:39 AM, Ramon Diaz-Uriarte wrote:
>>
>> Dear Martin,
>>
>> I am not sure to fully understand (or understand the consequences)
>>
>>
>> m
to take it up with R-devel, but
>> before doing so, experience suggests that doing our "homework" is
>> beneficial. Is the package publicly available somewhere? That may be
>> useful for other people.
>>
>> Kasper
>>
>>
>> On Tue, Sep 17, 2
;t (I assume) really care about the Rnw
Good idea; that would work.
Best,
R.
> file being installed, but you care about the PDF being present to the user.
>
> Best,
> Kasper
>
>
>
>
> On Tue, Sep 17, 2013 at 9:56 AM, Ramon Diaz-Uriarte wrote:
>
>>
>
tically generated did not include links to the PDF,
source, and code of the two vignettes (which I think is due to the long.Rnw not
having been processed).
Best,
R.
> Kasper
>
>
> On Tue, Sep 17, 2013 at 9:26 AM, Ramon Diaz-Uriarte wrote:
>
>>
>> Dear Kasper,
>>
>
thus user customization" and is up to us to do it if we want, so disregard
if irrelevant).
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
E
too.
Best,
R.
> If there are no objections I would be happy to incorporate this into
> BiocStyle.
>
> Best,
> Andrzej
>
> On Sat, Sep 27, 2014 at 8:51 AM, Ramon Diaz-Uriarte
> wrote:
>
>> Dear All,
>>
>> I am now using BiocStyle for most of the late
n seems reasonable as well.
>>> I'm
>>>>>> not sure about changing the label separator, though.
>>>>>>
>>>>>> If there are no objections I would be happy to incorporate this into
>>>>>> BiocStyle.
>>>>&g
mc.cores=2, mc.set.seed = FALSE)
>>> >> >>> > digest(m, 'crc32')
>>> >> >>> [1] "6bbada78"
>>> >> >>>
>>> >> >>> The problems is that the results are also depending on the
not find anything
BioC related.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.uam.es
h
Thanks Dan.
Best,
R.
On Thu, 18-06-2015, at 20:10, Dan Tenenbaum wrote:
> - Original Message -
>> From: "Ramon Diaz-Uriarte"
>> To: bioc-devel@r-project.org
>> Cc: "ramon diaz"
>> Sent: Thursday, June 18, 2015 11:00:51 AM
>> Sub
". R package version 1.3.2." it should say "BioConductor package version
1.99.0." (that is what I have in the CITATION file)
It is like if the CITATION is stuck from several versions ago (in
devel). But the rest of the info in that page does not show anything
strange.
Best,
Thank you.
Best,
R.
On Fri, 26-06-2015, at 20:03, Dan Tenenbaum wrote:
> - Original Message -
>> From: "Ramon Diaz-Uriarte"
>> To: "bioc-devel"
>> Cc: "ramon diaz"
>> Sent: Friday, June 26, 2015 6:22:51 AM
>> Subject
y understanding (from https://support.bioconductor.org/p/69140/)
that the coverage calculation was done a few times a week so I was
expecting it to be in place a few days after the release.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Aut
vel using R-devel?
> Btw. there are no instructions anymore at
> https://www.bioconductor.org/developers/how-to/useDevel/
>
> Best,
> Kasper
>
> [[alternative HTML version deleted]]
>
> ___
> Bioc-devel@r-project.
Hi Dan,
On Tue, 20-10-2015, at 23:56, Dan Tenenbaum wrote:
> Hi Ramon,
>
> - Original Message -
>> From: "Ramon Diaz-Uriarte"
>> To: "bioc-devel"
>> Cc: "ramon diaz"
>> Sent: Sunday, October 18, 2015 12:58:35 PM
>>
/ADaCGH2.html).
I am not sure how to proceed.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.ua
s to wait until the next build report and it
> will be gone.
>
> I just manually built your package on moscato2 and it was fine.
>
> Dan
>
>
> ----- Original Message -
>> From: "Ramon Diaz-Uriarte"
>> To: "bioc-devel"
>> Cc: &quo
.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.uam.es
http://ligarto.org/rdiaz
OK, thanks. Will wait until it becomes Thursday over there :-)
On Thu, 31-03-2016, at 08:22, Dan Tenenbaum wrote:
> There will be an answer tomorrow (Thursday Seattle time).
> Dan
>
>
> - Original Message -
>> From: "Ramon Diaz-Uriarte"
>>
stion on how to solve this?
>>
>> Thanks
>>
>> --
>> Luca De Sano
>> Research Associate
>>
>> Department of Informatics, Systems and Communication
>> University of Milan Bicocca
>>
>> Institute of Biomembranes and Bioenergetics of the Italian National
>> Research Council (IBB
language R
version.string R version 3.3.0 beta (2016-03-30 r70404)
nickname Supposedly Educational
>
Best,
R.
On Fri, 01-04-2016, at 01:20, Dan Tenenbaum wrote:
> I can also run the example on i386. Seems to
is not showing there).
On Fri, 01-04-2016, at 12:31, Ramon Diaz-Uriarte wrote:
> Hi Dan,
>
> I cannot reproduce the issue on a machine that claims to be 64-bit. I run
> your two examples of igraph and graph just fine (using the 32 and 64 bit R
> executables); details and output fro
#next-devel-bioconductor-33), and I can
remove that file. Is that correct?
Thanks,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
whether these are show stopper bugs depends on whether testthat
will be upgraded to 1.0
I am inclined to upgrade, but want to make sure that is the right course of
action.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madri
hanges in the new testthat.
>
> Dan
>
>
> - Original Message -----
>> From: "Ramon Diaz-Uriarte"
>> To: "bioc-devel"
>> Cc: "ramon diaz"
>> Sent: Thursday, April 14, 2016 6:22:06 AM
>> Subject: [Bioc-devel] updat
testthat to be updated.
Sorry, I think I was not clear: after adding a "print" it will work under
both 0.11 and 1.0.0. So I made the change and updated.
Best,
R.
>
>
> On Thu, Apr 14, 2016 at 9:22 AM, Ramon Diaz-Uriarte
> wrote:
>
>> Dear All,
>>
>>
ports to Depends.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.uam.es
http://ligarto.org/
On Fri, 29-04-2016, at 23:49, Martin Morgan
wrote:
> On 04/29/2016 05:23 PM, Ramon Diaz-Uriarte wrote:
>> Dear All,
>>
>> In case it matters, and since we are past the 22, I just noticed that a
>> package I maintain (ADaCGH2) is giving warnings in Li
/bioc/html/OncoSimulR.html).
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.uam.es
http://ligarto
Dear All,
During at least the last eight days I think there have been no new builds,
nor build reports, for BioC 3.4 (devel):
http://bioconductor.org/checkResults/devel/bioc-LATEST/
Is this on purpose?
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de
15:29:33 -0700 (Sun, 03 Jul 2016).*
> From what I see the builds are up to date and reflect recent changes to the
> svn.
>
> Maybe some browser caching issue on your side?
>
> Cheers,
> Andrzej
>
> On Mon, Jul 4, 2016 at 12:50 PM, Ramon Diaz-Uriarte
> wrote:
>
>
problems.
>
> Martin
>
>
>>
>> Cheers,
>> Andrzej
>>
>> On Mon, Jul 4, 2016 at 2:10 PM, Ramon Diaz-Uriarte
>> wrote:
>>
>>> Hi Andrezj,
>>>
>>> Sorry, the text of the message was not explicit (but the subject message
ppened to the windows machine, maybe someone from the
> core team has more insight into this.
>
Best,
R.
P.S. Sorry for misspelling your name in the previous email :-)
> Cheers,
> Andrzej
>
> On Mon, Jul 4, 2016 at 2:10 PM, Ramon Diaz-Uriarte
> wrote:
>
>> Hi Andre
er supported by BioC
either).
How can this be fixed, so that the information is updated?
Thanks,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Emai
Hi Dan,
Thanks for fixing it.
R.
On Tue, 26-07-2016, at 21:27, Dan Tenenbaum wrote:
> Hi Ramon,
>
> Thanks for letting us know about this. We've identified and fixed the problem.
>
> Dan
>
>
> - Original Message -
>> From: "Ramon Diaz-Uriarte&q
to accomplish
both is to use Rmd (not Rnw, even if I really, really, prefer LaTeX :-).
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmai
replace the second line by whatever (say, BiocStyle::html_document),
will render the HTML, and then put that in Github Pages.
Best,
R.
> Henrik
>
> On Aug 17, 2016 12:17, "Ramon Diaz-Uriarte" wrote:
>
>>
>> Dear All,
>>
>> I am consid
t;> even try/want this? My reading of the doc for the BiocStyle
>>>> (https://www.bioconductor.org/packages/devel/bioc/vignettes/
>>>> BiocStyle/inst/doc/HtmlStyle.html)
>>>> seems to suggest that the "natural" thing for Rmd vignettes is to be
>>>>
ediate plain Markdown / TeX rather than the final HTML / PDF product,
>> e.g. because they work better with screen readers.
>>
>> The only way I see you can have a PDF and a HTML version at the same time
>> is to create to identical vignettes each outputting a specific format
On Fri, 19-08-2016, at 15:41, Sean Davis wrote:
>> On Aug 19, 2016, at 9:10 AM, Ramon Diaz-Uriarte wrote:
>>
>>
>>
>>
>> On Wed, 17-08-2016, at 15:08, Sean Davis wrote:
>>>> On Aug 17, 2016, at 8:55 AM, Martin Morgan
>>>> wrot
s not been updated
in the last two builds.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.uam.es
http://ligarto
the "still" in the message subject) but
forgot to add the link. Sorry.
Best,
R.
> Best,
> Leo
>
> On Mon, Aug 29, 2016 at 5:40 PM, Ramon Diaz-Uriarte wrote:
>>
>> Dear All,
>>
>> At least for some packages
>> (http://bioconductor.org/packa
Martin, thanks a lot and thanks too for the details and the workaround for
packageDescription.
best,
R.
On Tue, 30-08-2016, at 00:17, Martin Morgan
wrote:
> On 08/29/2016 05:40 PM, Ramon Diaz-Uriarte wrote:
>>
>> Dear All,
>>
>> At least for some packages
>>
sful build on the Mac
for a couple of days
(http://bioconductor.org/checkResults/3.4/bioc-LATEST/index.html).
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2
ilder morelia is slow and has not finished yet.
>
> Hopefully the badge situation is transient and the badges will
> automatically update after the build report gets re-generated
> later today with the results for Mac.
>
> Thanks for your patience,
> H.
>
> On 09/22
Yes, that was the strange thing (for me at least): some packages showed
"all" and some showed "some" and a cursory look did not reveal any pattern.
R.
On Fri, 23-09-2016, at 08:26, Hervé Pagès wrote:
> On 09/22/2016 11:09 PM, Ramon Diaz-Uriarte wrote:
>> H
ned because I think the creation of the
BioC 3.4 release branch is today and release is tomorrow.
Best and apologies for the noise if this issue is known,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28
ould be gone in
> today's report.
>
> Cheers,
> H.
>
> On 10/17/2016 01:34 AM, Ramon Diaz-Uriarte wrote:
>> Dear All,
>>
>> Several packages (at least ADaCGH2, snapCGH, tilingArray, cellHTS2) are now
>> (last 24 to 48 hours?) failing to build in BioC 3.4 in
1] And, at least for the package I maintain, OncoSimulR, there are no
issues with R-devel in my local machines or with Travis
(https://travis-ci.org/rdiaz02/OncoSimul), or Appveyor
(https://ci.appveyor.com/project/rdiaz02/OncoSimul).
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
https://github.com/GuangchuangYu/ggtree/issues/91
Thanks for the link.
Best,
R.
>
> Best,
> Diego
>
> On Mon, Nov 14, 2016 at 7:50 PM, Ramon Diaz-Uriarte wrote:
>> Dear All,
>>
>> At least some packages (partial list in links below) are failing checks in
>>
ot;
that affects many (all?) packages that depend on ggrepel or other packages
that depend on ggplot2/ggproto.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2
d work around the problem on morelia by
> re-installing ggrepel from source but that would just put a lid on
> the problem: the end user would still see the problem on his/her
> machine.
I am writing the maintainer of ggrepel (I've CC'd you). I am attaching your
full email, so he c
xl), dots))
It seems that what triggers the problem is an innocuous plot.default
followed by dev.hold? (none of which I call explicitly in my code)
At least another package, arrayQualityMetrics seems to experience a
somewhat similar problem:
http://bioconductor.org/checkResults/devel/bioc-LATEST
Dear Martin,
Thanks a lot for looking into this. I'll wait then.
Best,
R.
On Mon, 03-04-2017, at 18:34, Martin Morgan
wrote:
> On 03/31/2017 04:19 AM, Ramon Diaz-Uriarte wrote:
>>
>> Dear All,
>>
>> A package I maintain, ADaCGH2, is failing to build in v
4-2017, at 18:34:26, Martin Morgan
wrote:
> On 03/31/2017 04:19 AM, Ramon Diaz-Uriarte wrote:
>>
>> Dear All,
>>
>> A package I maintain, ADaCGH2, is failing to build in veracruz2 with a
>> segfault that seems to happen when plotting (in a call to plotting th
expect it to go away
> when things are sorted out with the new El Capitan binaries.
> Unfortunately it's not something we fully control so let's wait
> and see...
>
> Cheers,
> H.
>
>
> On 04/07/2017 12:55 AM, Ramon Diaz-Uriarte wrote:
>>
>> Dear Mart
Dear Martin,
On Fri, 07-04-2017, at 12:55:55, Martin Morgan
wrote:
> On 04/07/2017 03:55 AM, Ramon Diaz-Uriarte wrote:
>>
>> Dear Martin and Valerie,
>>
>>
>> I am not sure how to proceed here since the 14th is approaching and I still
>> see this err
o this and letting me know.
Best,
R.
>
> Cheers,
> H.
>
>
> On 04/08/2017 06:34 AM, Ramon Diaz-Uriarte wrote:
>>
>> Dear Martin,
>>
>>
>> On Fri, 07-04-2017, at 12:55:55, Martin Morgan
>> wrote:
>>> On 04/07/2017 03:55 AM, Ramon Diaz-Uriart
very of this message to the intended
>>>recipient(s), you are hereby notified that any disclosure, copying,
>>>distribution, or use of this email message is prohibited. If you have
>>>received this message in error, please notify the sender immediately by
>>>e-mail and delet
should do? Just looking at the log I do not know how
to proceed.
Thanks,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d
Dear Martin,
On Fri, 13-October-2017, at 12:27:31, Martin Morgan
wrote:
> On 10/12/2017 07:08 AM, Ramon Diaz-Uriarte wrote:
>> Dear All,
>>
>> I have noticed that on the latest build report, a package I maintain,
>> OncoSimulR
>> (http://bioconductor.o
?
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.uam.es
http://ligarto.org/rdiaz
.
>
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Cancer Institute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
> ________
> From: Bioc-de
t reproduce under Linux and that I think are false
positives. Is there a way to avoid this warning? As far as I can tell,
those links really exist.
Best,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28
positives:
> mclapply help page does exists in parallel package.
> as.MAList does exists in devel limma
>
> HTH
>
> On 6 April 2018 at 16:35, Vincent Carey wrote:
>
>> ive seen this too apropos bigrquery on windows
>>
>> On Fri, Apr 6, 2018 at 10:22 AM Ram
(it might have been broken prior to my commit...).
OK, thanks.
Best,
R.
>
> Martin
>
>>
>> HTH
>>
>> On 6 April 2018 at 16:35, Vincent Carey wrote:
>>
>>> ive seen this too apropos bigrquery on windows
>>>
>>> On Fri, Apr 6,
Dear Martin,
On Mon, 09-April-2018, at 17:35:47, Martin Maechler
wrote:
>>>>>> Ramon Diaz-Uriarte
>>>>>> on Mon, 9 Apr 2018 16:51:38 +0200 writes:
>
> > Dear Martin,
>
> > On Fri, 06-April-2018, at 18:59:00, Martin Morgan
. If you are not the intended recipient(s), or the employee or
> agent responsible for the delivery of this message to the intended
> recipient(s), you are hereby notified that any disclosure, copying,
> distribution, or use of this email message is prohibited. If you have
> received
On Wed, 18-April-2018, at 21:09:32, Martin Morgan
wrote:
> On 04/18/2018 02:45 PM, Vincent Carey wrote:
>>
>>
>> On Mon, Apr 9, 2018 at 11:23 AM, Martin Morgan
>> mailto:martin.mor...@roswellpark.org>>
>> wrote:
>>
>>
>>
o about it.
Thanks,
R.
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...@gmail.com
ramon.d...@iib.uam.es
1
> passed 'R CMD check' on all platforms and propagated so this is why you
> see it on the package landing page.
>
> I addressed the issue with the script so hopefully the report will get
> updated today around 10 am EST. We should see OncoSimulR 2.13.1 on this
> new repor
-mbig-obj -O3
## Ignored
PKG_CXX11FLAGS = -Wa,-mbig-obj -O3
## Ignored
PKG_CXX11FLAGS += -Wa,-mbig-obj -O3
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-497-2412
Email: rdia...
s sorted out. It
> has been a todo list item for me, for a while, and I should really try to
> resolve it.
>
> But for a quick fix, look at affxparser.
>
> Best,
> Kasper
>
> On Fri, May 24, 2019 at 10:16 AM Ramon Diaz-Uriarte
> wrote:
>
>>
>> Dea
s" error or the linker never finishing. E.g.,
https://sourceforge.net/p/mingw-w64/discussion/723797/thread/c6b70624/
--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain
Phone: +34-91-4
ted on Windows).
>
>2) Use conditionals in your code (e.g. "if (platform is Windows)
> then do this else do that") to make the new functionality available
> on non Windows platforms. With this solution, Windows users
> will be able to use everything in th
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