Re: [Jmol-users] The future of Java?

2007-06-12 Thread Rzepa, Henry
>Some comments on these bits: > >> I have been asked questions >> such as "what is the lifetime of a WEO", and what happens >> in eg 10 years time when the Java virtual engine is no longer >> installed/supported on the majority of Web browsers. > >Jmol is opensource! There is absolutely no reas

Re: [Jmol-users] The future of Java?

2007-06-12 Thread Egon Willighagen
Some comments on these bits: > I have been asked questions > such as "what is the lifetime of a WEO", and what happens > in eg 10 years time when the Java virtual engine is no longer > installed/supported on the majority of Web browsers. Jmol is opensource! There is absolutely no reason not

Re: [Jmol-users] The future of Java?

2007-06-12 Thread Rzepa, Henry
>Mmmm... >So nobody is using Java? Where does he live? >And if he doesn't say what's the alternative, is this assertion trustable? > >I understood that iPhone uses plain MacOSX, so how is Java prevented >from working? Do they block installation? What happens with other plugins, >like Flash? Can't t

Re: [Jmol-users] The future of Java?

2007-06-12 Thread Egon Willighagen
>> Steve Jobs at the WWDC: >> >> "Jobs also confirmed that iPhone won't support Java. "[It's] not worth >> building in," he said. "Nobody uses Java anymore. It's this big >> heavyweight ball and chain." > > Mmmm... interesting thought by Sun. Dump Java into the opensource, > continue yourself with

[Jmol-users] RotateSelected

2007-06-12 Thread ms
Hello, I tried to use the RotateSelected function, but it doesn't work. In the documentation I found a remark "V. 11.2 - new", but the newest stable version to download is 11.0.3, and I cannot believe that the documentation ist earlier online than the program. So my questions : Can I get version

Re: [Jmol-users] problem with spin after loop and quit

2007-06-12 Thread Bob Hanson
good catch -- simple fix. 11.1.49 Frieda Reichsman wrote: > It seems that after issuing a script with a loop command: > move 0 -30 0 0 0 0 0 0 2.0 > move 0 30 0 0 0 0 0 0 2.0 > loop on > > I cannot get the structure to spin using > quit; spin on > > until I either > - click in the applet, or >

[Jmol-users] problem with spin after loop and quit

2007-06-12 Thread Frieda Reichsman
It seems that after issuing a script with a loop command: move 0 -30 0 0 0 0 0 0 2.0 move 0 30 0 0 0 0 0 0 2.0 loop on I cannot get the structure to spin using quit; spin on until I either - click in the applet, or - issue a moveto command (move command does not work) This is true for Jmol 11.

Re: [Jmol-users] The future of Java?

2007-06-12 Thread Angel Herraez
Mmmm... So nobody is using Java? Where does he live? And if he doesn't say what's the alternative, is this assertion trustable? I understood that iPhone uses plain MacOSX, so how is Java prevented from working? Do they block installation? What happens with other plugins, like Flash? Can't the br

Re: [Jmol-users] The future of Java?

2007-06-12 Thread Egon Willighagen
> Steve Jobs at the WWDC: > > "Jobs also confirmed that iPhone won't support Java. "[It's] not worth > building in," he said. "Nobody uses Java anymore. It's this big > heavyweight ball and chain." Mmmm... interesting thought by Sun. Dump Java into the opensource, continue yourself with your new

[Jmol-users] The future of Java?

2007-06-12 Thread Rzepa, Henry
Steve Jobs at the WWDC: "Jobs also confirmed that iPhone won't support Java. "[It's] not worth building in," he said. "Nobody uses Java anymore. It's this big heavyweight ball and chain." Whilst this might not seem to matter just for the iPhone (although it would have been nice to display Jmol

Re: [Jmol-users] jmol and overlay data

2007-06-12 Thread Angel Herraez
Hi Raphael Tell me what you think of this: http://biomodel.uah.es/angel/RaphaelBauer/mapping.htm - This SF.net email is sponsored by DB2 Express Download DB2 Express C - the FREE version of DB2 express and take control of y

Re: [Jmol-users] Not all chemicals are molecules

2007-06-12 Thread Angel Herraez
Phillip Barak wrote: > is their any reason _not_ to specifically that usage specifically, >as in: > > 6- "Jmol: an open-source Java viewer for three-dimensional chemical, > crystallographic, and biomolecular structures." Well, one reason is to have a simple title. I don't want to disregard an

Re: [Jmol-users] jmol and overlay data

2007-06-12 Thread Raphael A. Bauer
Angel Herraez wrote: >> Can you think of anything inside jmol that helps me to visualize this >> "abstract" superposition mapping? > > On a first thought, there may be many wasy to indicate that: csame > color, lines between matching atoms, etc. > > The key point is > how and where is your "ass

Re: [Jmol-users] Animation: pause/resume, and unwanted frame skipping

2007-06-12 Thread Bob Hanson
Eric Martz wrote: >In >contrast, "anim on" restarts from the first frame. > > > and resets the frame range to "all models" - This SF.net email is sponsored by DB2 Express Download DB2 Express C - the FREE version of DB2 e

Re: [Jmol-users] Not all chemicals are molecules

2007-06-12 Thread Alan Hewat
5- "Jmol: an open-source Java viewer for three-dimensional atomic and molecular structures" 6- "Jmol: an open-source Java viewer for three-dimensional chemical, crystallographic, and biomolecular structures." "Atomic structure" has come to suggest the structure of the atom (cf nuclear structure)