[Bibdesk-users] BibDesk crashes

[Dr. Adam M. Goldstein PhD MSLIS]

Hi all

BibDesk crashes every time I try to create a new publication. It occurs with BD 
1.6.3 (3444) (the last release) and the latest nightly build. I’m using OS 
10.10.2 (14C109).

I understand deleting preferences doesn’t have the effects it once did—what’s 
the alternative now.

It happens after after a restart as well.

Any insights?

Adam


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Re: [Bibdesk-users] Release engineer

[Dr. Adam M. Goldstein PhD MSLIS]

You have to create an svn repository on your Mac with the BibDesk code, then, 
when it's time for a release, compile the code using XCode, edit the release 
notes, create a dmg on your desktop, upload the dmg to sourceforge, and then 
send mail to the various mailing lists. Compiling using XCode is entirely 
gui-driven, and the other stuff amounts to moving some files around and editing 
text files.

As Christiaan says, there's a how-to document that's pretty clear. If you have 
questions, you can ask the developer list.

When you think it's time for a release, check around on the user and developer 
lists, to see if there are bugs, or work in progress that people want to finish 
up before the release. If a bunch of new features have been added, a release is 
probably a good idea. 

I have had a hard time getting my machine to cache the svn credentials, for 
reasons that appear to be totally particular to my machine. I have spent much 
time troubleshooting, to no avail. I just upgraded to Yosemite, so I will 
probably have to start from again on a new round of issues with that. Over the 
December holidays, I'll have some time, so maybe I can figure it all out then. 
If there were a few people who could go the release, we could get them out more 
often, with less work for each of us. 

I like doing the releases and I have learned a lot by doing them. I'm not much 
of a coder, beyond awk scripting and some shell scripts, so it's not like I 
bring a lot of expertise. The first time takes a while, and you might have to 
stop and come back to it. But once everything is in place, you can do it in 
around an hour, especially if you remember the steps from the last time.  

In any case, if you or someone else reading this is inclined to give it a try, 
please do! 

Adam 

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> On Dec 4, 2014, at 05:09, Christiaan Hofman  wrote:
> 
> Once every few months a new release should be created. So of course you 
> should be able to work a bit with Xcode. The steps that are involved in the 
> release process are described in a document in the project.
> 
> Christiaan
> 
>> On Dec 4, 2014, at 4:46, Ken Mankoff wrote:
>> 
>> What is involved/required/expected?
>> 
>> Please excuse brevity. Sent from pocket computer with tiny non-haptic 
>> feedback keyboard. 
>> 
>>> On Dec 4, 2014, at 2:09, "Dr. Adam M. Goldstein PhD MSLIS" 
>>>  wrote:
>>> 
>>> Greetings all
>>> 
>>> Due to a new set of professional commitments, my time for engineering new 
>>> releases of BibDesk is sharply limited. I will chip in when I can, but it’s 
>>> not going to be very often—once or twice a year, looking at recent months. 
>>> If there is someone out there with access to sourceforge.net who has some 
>>> experience with Xcode, I hope that person will step forward. Otherwise, it 
>>> will fall to Christiaan, who has been shouldering much of the load 
>>> developing BibDesk. 
>>> 
>>> Best
>>> 
>>> Adam
>>> 
>>> 
>>> Adam M. Goldstein PhD, MSLIS
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>> 

[Bibdesk-users] Release engineer

[Dr. Adam M. Goldstein PhD MSLIS]

Greetings all

Due to a new set of professional commitments, my time for engineering new 
releases of BibDesk is sharply limited. I will chip in when I can, but it’s not 
going to be very often—once or twice a year, looking at recent months. If there 
is someone out there with access to sourceforge.net  
who has some experience with Xcode, I hope that person will step forward. 
Otherwise, it will fall to Christiaan, who has been shouldering much of the 
load developing BibDesk. 

Best

Adam


Adam M. Goldstein PhD, MSLIS
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Re: [Bibdesk-users] importing PDFs

[Dr. Adam M. Goldstein PhD MSLIS]

There are some scripts for downloading PDF's from ArXiv, so maybe looking at 
those will generate some ideas. I think the approach is to start an auto-file 
operation. Maybe Hazel can run a script to create a new record with dummy 
bibliography data and that then gives BD the appropriate auto-file location. 

You can find the example scripts on the wiki, which I think you can get to from 
the help menu in BD. 



Adam M. Goldstein PhD, MSLIS
--
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http://www.shiftingbalance.org
http://www.twitter.com/z_californianus
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> On Sep 26, 2014, at 8:41, Ken Mankoff  wrote:
> 
> 
> Yes you can automate it with applescript, but I'm not very familiar with
> that system so I can't offer more advice.
> 
>  -k.
> 
> * On 2014-09-26 at 07:21, Antonio Fortin wrote:
>> Thanks Ken. I’d like to be able to automate the importing of PDFs into
>> BibDesk. I’m on a Mac, so what I do to add files to other apps is have
>> Hazel (an automation assistant) monitor a folder and, depending on the
>> tag a file has, it will open it in a specific app. That’s usually
>> enough to import it into that app. However, with BibDesk, this doesn’t
>> work - I get an error saying that the file isn’t a text file. I assume
>> that this is because when one opens a file in BibDesk, it expects a
>> library (.bib) rather than a binary file. Is there a different command
>> I could use, or even an AppleScript, that would allow me to add a PDF?
>> 
>> I’m currently migrating from Papers to BibDesk, so this would also be 
>> helpful for that.
>> 
>> Antonio
>> 
>> 
>>> On 26 Sep 2014, at 13:01, Ken Mankoff  wrote:
>>> 
>>> Drag and drop does this. Just drop between entries, not on a entry. 
>>> 
>>> Please excuse brevity. Sent from pocket computer with tiny non-haptic 
>>> feedback keyboard. 
>>> 
 On Sep 26, 2014, at 6:44, Antonio Fortin  
 wrote:
 
 Hi all,
 
 Is there any way to import PDFs that don’t already have an entry in 
 BibDesk? The idea would be that, if the PDF has no metadata (or that 
 metadata is junk, which is usually the case, that this would just create a 
 blank entry with the PDF attached to it.
 
 Thanks,
 Antonio
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Re: [Bibdesk-users] v1.6.1 crashes on 10.9

[Dr. Adam M. Goldstein PhD MSLIS]

Apropos these comments, I wanted do a release last week, but my laptop had a 
logic board failure. 

Thoughts in whether I should proceed? I'm picking up the computer from the 
repair shop today. 

I had been using BD on mavericks with no problems at all for several weeks. 

Related issue: are we still going to support Lion (10.7)? My 2006 laptop can't 
be updated past Lion, so we'd lose people if we dropped it, I think.

What goes into that kind of decision? Support is dropped when the current 
release is deemed too buggy to run on the OS in question? Then, what, the 
previous release is listed as the last to support the OS? 

Adam G

Sent from my iPhone

> On Nov 14, 2013, at 12:58, Simon Spiegel  wrote:
> 
> 
>> On 14.11.2013, at 18:48, jhgowen  wrote:
>> 
>> V. 1.6.1 was very stable on Mountain Lion, but on upgrading to Mavericks, I 
>> found that BibDesk was crashing all the time. Almost any action would cause 
>> it to crash, including dragging a citation from one bibliography window to 
>> another, attaching a file, pasting in text to the abstract pane
>> 
>> I recently upgraded to the nightly build 20131029, and this has fixed the 
>> crashing problem on Mavericks. 
>> I don't know if it is something to do with the version, or if there was 
>> something messed up by the OS upgrade and a simple reinstall would have 
>> worked, but just wanted to let suggest that you put out a new stable 
>> version, which should then run well on 10.9.
> 
> If that's of any help: I don't see any problems with BibDesk on Mavericks.
> 
> Simon
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Re: [Bibdesk-users] Release

[Dr. Adam M. Goldstein PhD MSLIS]

Probably this is the issue. Thanks for the help.

Sent from my iPad

> On Sep 20, 2013, at 3:32, Christiaan Hofman  wrote:
> 
> Have you switched to the new database, at 
> svn+ssh://zcalifornia...@svn.code.sf.net/p/bibdesk/svn? I think you may also 
> need to have a ssh key registered with sf.net (go to your Account info from 
> SF, and look at Services, there are some links.) I think I also have set my 
> user name in .ssh/config.
> 
> Christiaan
> 
>> On Sep 20, 2013, at 5:28, Dr. Adam M. Goldstein PhD MSLIS wrote:
>> 
>> I'm having problems committing. I get an error:
>> 
>> Code/bibdesk-svn] zsh % svn commit --username=zcalifornianus -m "Building 
>> for release."
>> svn: E175013: Commit failed (details follow):
>> svn: E175013: Access to '/p/bibdesk/svn/!svn/me' forbidden
>> [Code/bibdesk-svn] zsh % svn list
>> [z_californianus@shiftingbalance]
>> 
>> Kind of stumped about what to do. I am not sure if I have the right 
>> privileges? My sf username is zcalifornianus
>> 
>> This was during the release process.
>> 
>>> On Sep 18, 2013, at 12:48 PM, Dr. Adam M. Goldstein PhD MSLIS 
>>>  wrote:
>>> 
>>> OK, I'm on it!
>>> 
>>> Adam G
>>> 
>>>> On Sep 18, 2013, at 4:44 AM, Christiaan Hofman  wrote:
>>>> 
>>>> OK, I guess it's Adam than. (G?) Anyway, BibDesk is ready for release. The 
>>>> main change is the ISI WoS search groups, which has been rewritten and 
>>>> also now allows passwords, that was reported to work.
>>>> 
>>>> Christiaan
>>>> 
>>>>> On Sep 13, 2013, at 20:20, Dr. Adam M. Goldstein PhD MSLIS wrote:
>>>>> 
>>>>> I'm in the same position regarding when to release. I can start doing it 
>>>>> again. I think you have to be a little proactive and check with people on 
>>>>> the developer and users list.
>>>>> 
>>>>> Adam g
>>>>> 
>>>>> Sent from my iPad
>>>>> 
>>>>>> On Sep 13, 2013, at 12:03, "Maxwell, Adam R"  
>>>>>> wrote:
>>>>>> 
>>>>>> Was wondering that myself; I did the last one, IIRC. Not sure if 
>>>>>> Goldstein wants to keep doing them.
>>>>>> 
>>>>>> I'm willing to do releases, but I don't have a good feel for when they 
>>>>>> should be done anymore (what's been added, how long it's been tested, 
>>>>>> etc). If a bunch of new stuff has landed, maybe you could let -users 
>>>>>> know what to test in nightly builds? Or just say to look at release 
>>>>>> notes? I'd take that as a signal that it's time for a release.
>>>>>> 
>>>>>>> On Sep 13, 2013, at 06:18, Christiaan Hofman  wrote:
>>>>>>> 
>>>>>>> Who's actually doing the release nowadays?
>>>>>>> 
>>>>>>> Christiaan
>>>>>>> 
>>>>>>>> On Sep 4, 2013, at 10:51, Christiaan Hofman wrote:
>>>>>>>> 
>>>>>>>> BibDesk is now ready for release. I have enabled the localizations in 
>>>>>>>> the last release, so those can be tested. Also the release notes have 
>>>>>>>> been updated. So please test out the latest nightlies at 
>>>>>>>> <https://www.dropbox.com/sh/pkt955ttu8vbsdi/E21z4ghXRy/BibDesk>.
>>>>>>>> 
>>>>>>>> Christiaan
>>>>>>>> 
>>>>>>>> 
>>>>>>>>> On Aug 12, 2013, at 16:56, Dr. Adam M. Goldstein PhD MSLIS wrote:
>>>>>>>>> 
>>>>>>>>> Hi all
>>>>>>>>> 
>>>>>>>>> Not much traffic on the users or developer's list---anything that 
>>>>>>>>> needs to be nailed down before a release?
>>>>>>>>> 
>>>>>>>>> Adam
>>>>>>> 
>>>>>>> 
>>>>>>> --
>>>>>>> How ServiceNow helps IT people transform IT departments:
>>>>>>> 1. Consolidate legacy IT systems to a single system of record for IT
>>>>>>>

Re: [Bibdesk-users] Release

[Dr. Adam M. Goldstein PhD MSLIS]

I'm having problems committing. I get an error:

Code/bibdesk-svn] zsh % svn commit --username=zcalifornianus -m "Building for 
release."
svn: E175013: Commit failed (details follow):
svn: E175013: Access to '/p/bibdesk/svn/!svn/me' forbidden
[Code/bibdesk-svn] zsh % svn list
[z_californianus@shiftingbalance]

Kind of stumped about what to do. I am not sure if I have the right privileges? 
My sf username is zcalifornianus

This was during the release process.

On Sep 18, 2013, at 12:48 PM, Dr. Adam M. Goldstein PhD MSLIS 
 wrote:

> OK, I'm on it!
> 
> Adam G
> 
> On Sep 18, 2013, at 4:44 AM, Christiaan Hofman  wrote:
> 
>> OK, I guess it's Adam than. (G?) Anyway, BibDesk is ready for release. The 
>> main change is the ISI WoS search groups, which has been rewritten and also 
>> now allows passwords, that was reported to work.
>> 
>> Christiaan
>> 
>> On Sep 13, 2013, at 20:20, Dr. Adam M. Goldstein PhD MSLIS wrote:
>> 
>>> I'm in the same position regarding when to release. I can start doing it 
>>> again. I think you have to be a little proactive and check with people on 
>>> the developer and users list.
>>> 
>>> Adam g
>>> 
>>> Sent from my iPad
>>> 
>>> On Sep 13, 2013, at 12:03, "Maxwell, Adam R"  wrote:
>>> 
>>>> Was wondering that myself; I did the last one, IIRC. Not sure if Goldstein 
>>>> wants to keep doing them.
>>>> 
>>>> I'm willing to do releases, but I don't have a good feel for when they 
>>>> should be done anymore (what's been added, how long it's been tested, 
>>>> etc). If a bunch of new stuff has landed, maybe you could let -users know 
>>>> what to test in nightly builds? Or just say to look at release notes? I'd 
>>>> take that as a signal that it's time for a release.
>>>> 
>>>> On Sep 13, 2013, at 06:18, Christiaan Hofman  wrote:
>>>> 
>>>>> Who's actually doing the release nowadays?
>>>>> 
>>>>> Christiaan
>>>>> 
>>>>> On Sep 4, 2013, at 10:51, Christiaan Hofman wrote:
>>>>> 
>>>>>> BibDesk is now ready for release. I have enabled the localizations in 
>>>>>> the last release, so those can be tested. Also the release notes have 
>>>>>> been updated. So please test out the latest nightlies at 
>>>>>> <https://www.dropbox.com/sh/pkt955ttu8vbsdi/E21z4ghXRy/BibDesk>.
>>>>>> 
>>>>>> Christiaan
>>>>>> 
>>>>>> 
>>>>>> On Aug 12, 2013, at 16:56, Dr. Adam M. Goldstein PhD MSLIS wrote:
>>>>>> 
>>>>>>> Hi all
>>>>>>> 
>>>>>>> Not much traffic on the users or developer's list---anything that needs 
>>>>>>> to be nailed down before a release?
>>>>>>> 
>>>>>>> Adam
>>>>> 
>>>>> 
>>>>> --
>>>>> How ServiceNow helps IT people transform IT departments:
>>>>> 1. Consolidate legacy IT systems to a single system of record for IT
>>>>> 2. Standardize and globalize service processes across IT
>>>>> 3. Implement zero-touch automation to replace manual, redundant tasks
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>>>>> ___
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>>>>> Bibdesk-users@lists.sourceforge.net
>>>>> https://lists.sourceforge.net/lists/listinfo/bibdesk-users
>>>> 
>>>> 
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>>>> 1. Consolidate legacy IT systems to a single system of record for IT
>>>> 2. Standardize and globalize service processes across IT
>>>> 3. Implement zero-touch automation to replace manual, redundant tasks
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>>>> https://lists.sourceforge.net/lists/listinfo/bibd

Re: [Bibdesk-users] Release

[Dr. Adam M. Goldstein PhD MSLIS]

OK, I'm on it!

Adam G

On Sep 18, 2013, at 4:44 AM, Christiaan Hofman  wrote:

> OK, I guess it's Adam than. (G?) Anyway, BibDesk is ready for release. The 
> main change is the ISI WoS search groups, which has been rewritten and also 
> now allows passwords, that was reported to work.
> 
> Christiaan
> 
> On Sep 13, 2013, at 20:20, Dr. Adam M. Goldstein PhD MSLIS wrote:
> 
>> I'm in the same position regarding when to release. I can start doing it 
>> again. I think you have to be a little proactive and check with people on 
>> the developer and users list.
>> 
>> Adam g
>> 
>> Sent from my iPad
>> 
>> On Sep 13, 2013, at 12:03, "Maxwell, Adam R"  wrote:
>> 
>>> Was wondering that myself; I did the last one, IIRC. Not sure if Goldstein 
>>> wants to keep doing them.
>>> 
>>> I'm willing to do releases, but I don't have a good feel for when they 
>>> should be done anymore (what's been added, how long it's been tested, etc). 
>>> If a bunch of new stuff has landed, maybe you could let -users know what to 
>>> test in nightly builds? Or just say to look at release notes? I'd take that 
>>> as a signal that it's time for a release.
>>> 
>>> On Sep 13, 2013, at 06:18, Christiaan Hofman  wrote:
>>> 
>>>> Who's actually doing the release nowadays?
>>>> 
>>>> Christiaan
>>>> 
>>>> On Sep 4, 2013, at 10:51, Christiaan Hofman wrote:
>>>> 
>>>>> BibDesk is now ready for release. I have enabled the localizations in the 
>>>>> last release, so those can be tested. Also the release notes have been 
>>>>> updated. So please test out the latest nightlies at 
>>>>> <https://www.dropbox.com/sh/pkt955ttu8vbsdi/E21z4ghXRy/BibDesk>.
>>>>> 
>>>>> Christiaan
>>>>> 
>>>>> 
>>>>> On Aug 12, 2013, at 16:56, Dr. Adam M. Goldstein PhD MSLIS wrote:
>>>>> 
>>>>>> Hi all
>>>>>> 
>>>>>> Not much traffic on the users or developer's list---anything that needs 
>>>>>> to be nailed down before a release?
>>>>>> 
>>>>>> Adam
>>>> 
>>>> 
>>>> --
>>>> How ServiceNow helps IT people transform IT departments:
>>>> 1. Consolidate legacy IT systems to a single system of record for IT
>>>> 2. Standardize and globalize service processes across IT
>>>> 3. Implement zero-touch automation to replace manual, redundant tasks
>>>> http://pubads.g.doubleclick.net/gampad/clk?id=5127&iu=/4140/ostg.clktrk
>>>> ___
>>>> Bibdesk-users mailing list
>>>> Bibdesk-users@lists.sourceforge.net
>>>> https://lists.sourceforge.net/lists/listinfo/bibdesk-users
>>> 
>>> 
>>> --
>>> How ServiceNow helps IT people transform IT departments:
>>> 1. Consolidate legacy IT systems to a single system of record for IT
>>> 2. Standardize and globalize service processes across IT
>>> 3. Implement zero-touch automation to replace manual, redundant tasks
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>>> ___
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>>> Bibdesk-users@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/bibdesk-users
>> 
>> --
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>> https://lists.sourceforge.net/lists/listinfo/bibdesk-users
> 
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Re: [Bibdesk-users] Release

[Dr. Adam M. Goldstein PhD MSLIS]

I'm in the same position regarding when to release. I can start doing it again. 
I think you have to be a little proactive and check with people on the 
developer and users list.

Adam g

Sent from my iPad

On Sep 13, 2013, at 12:03, "Maxwell, Adam R"  wrote:

> Was wondering that myself; I did the last one, IIRC. Not sure if Goldstein 
> wants to keep doing them.
> 
> I'm willing to do releases, but I don't have a good feel for when they should 
> be done anymore (what's been added, how long it's been tested, etc). If a 
> bunch of new stuff has landed, maybe you could let -users know what to test 
> in nightly builds? Or just say to look at release notes? I'd take that as a 
> signal that it's time for a release.
> 
> On Sep 13, 2013, at 06:18, Christiaan Hofman  wrote:
> 
>> Who's actually doing the release nowadays?
>> 
>> Christiaan
>> 
>> On Sep 4, 2013, at 10:51, Christiaan Hofman wrote:
>> 
>>> BibDesk is now ready for release. I have enabled the localizations in the 
>>> last release, so those can be tested. Also the release notes have been 
>>> updated. So please test out the latest nightlies at 
>>> <https://www.dropbox.com/sh/pkt955ttu8vbsdi/E21z4ghXRy/BibDesk>.
>>> 
>>> Christiaan
>>> 
>>> 
>>> On Aug 12, 2013, at 16:56, Dr. Adam M. Goldstein PhD MSLIS wrote:
>>> 
>>>> Hi all
>>>> 
>>>> Not much traffic on the users or developer's list---anything that needs to 
>>>> be nailed down before a release?
>>>> 
>>>> Adam
>> 
>> 
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[Bibdesk-users] Release

[Dr. Adam M. Goldstein PhD MSLIS]

Hi all

Not much traffic on the users or developer's list---anything that needs to be 
nailed down before a release?

Adam

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[Bibdesk-users] Searching by key word

[Dr. Adam M. Goldstein PhD MSLIS]

Hello all,

When the searching features were added, there was some discussion of what 
fields ought to be searched from the drop-down toolbar-like met of menus. I had 
suggested that keyword be one of those fields. I couldn't come up with a reason 
why we should add this at the time, but now I have one. There are some words 
and phrases that are used as keywords that are common, and appear in titles or 
other fields frequently. Limiting the search to keyword would eliminate many 
false positives.

Adam

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Re: [Bibdesk-users] Citing Ancient Sources utilizing BibDesk

[Dr. Adam M. Goldstein PhD MSLIS]

Well, that's a little more than most of us on the BibDesk users list can read 
without drifting off...is there a specific example you can give us from one of 
these kinds of sources?

The best place for this question is probably a BibTeX users list, because the 
question is really about the style files. 

You should probably check out biblatex because of the enthusiasm people have 
for how easy it is to customize. 

If you are looking for references you can export to Word or Pages, you can 
design templates using BibDesk.

Adam

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On Mar 2, 2013, at 12:01, Kevin Fjelsted  wrote:

> I am looking fora solution to implement the style described in the following 
> article (enclosed). Is there a package combination and BibDesk solution that 
> would permit one to follow the format described?
> 
> -Kevin
> <
> Guidelines for Citing Ancient Sources
> Prof. Eva von Dassow
> 
>The same principles and purposes underlie citation practices no matter 
> what types of items are the objects of reference – ancient sources (texts and 
> artifacts), works of art, or works of modern scholarship.  Citation of 
> ancient sources differs in form, but not in principle, from citation of 
> modern works; likewise, citation of artifacts differs in form, but not in 
> principle, from citation of texts.  All citations and references must include 
> specific and accurate identification of: 1) the item in question, 2) its 
> publication or the publication in which it is found (if published; otherwise, 
> its provenience and location), and 3) the part(s) of the item cited or 
> referred to; furthermore, 4) the item’s author(s) or creator(s) must be 
> identified and credited, if individual author(s) or creator(s) exist and are 
> known.  Ancient texts and artifacts are normally accessed through modern 
> publications.  Thus, when citing or referring to these types of primary 
> sources, it is necessary to identify both the ancient source and the modern 
> publication, distinguishing the former clearly from the latter, according to 
> each of the criteria enumerated above.
> A reference to a modern publication provides the following information: 
> author; publication title; facts of publication; and indication of the place 
> within the publication to which reference is made (usually by page numbers).  
> This simple scheme is complicated by a variety of factors.  For instance, if 
> the publication in question is a component of a larger work, such as an 
> article within a book, an entry within an encyclopedia, or a volume in a 
> series, the larger work must be distinguished from its component, both by 
> title and by editor or author; thus, the reference gives the information 
> about the larger work along with the information about the component (usually 
> the facts of publication are identical and therefore not repeated).  In an 
> analogous fashion, a reference to an ancient source should include both the 
> information about the modern publication and the information about the 
> ancient source, as follows: title or other identification of the ancient 
> source; modern author, translator, or editor; title of the modern 
> publication; facts of publication; indication of the place within the modern 
> publication where the ancient source is found (usually pages); and, as 
> applicable, indication of the place within the ancient source to which 
> reference is made (on this, see further below).
>Students must use, and accurately follow, a handbook of style in order to 
> learn how to cite and refer to modern publications, both in bibliographic 
> entries and in notes or parenthetical references (note the differences among 
> these!).  The most comprehensive such handbook is the Chicago Manual of 
> Style, 14th ed. (Chicago: University of Chicago Press, 1993).  I recommend 
> that students use Mary Lynn Rampolla’s Pocket Guide to Writing in History, 
> 5th ed. (Boston: Bedford/St. Martin’s, 2007), a concise handbook which 
> provides documentation models based on the guidelines established by the 
> Chicago Manual of Style.  Since there exists no handbook for students which 
> provides guidelines for citing ancient sources other than the Bible and 
> classical Greek and Latin literature, I have written up the following 
> instructions and examples to explain how to cite ancient sources of various 
> types.
> 
>•Ancient literary works
> 
> Standard book, chapter, and paragraph or verse divisions exist for classical 
> works of literature and for biblical books.  Citations of classical works 
> give the name of the author, the title of the 

Re: [Bibdesk-users] Autofiling question

[Dr. Adam M. Goldstein PhD MSLIS]

On Jan 7, 2013, at 7:32 AM, Christiaan Hofman  wrote:

> 
> On Jan 7, 2013, at 3:28, Dr. Adam M. Goldstein PhD MSLIS wrote:
> 
>> On Dec 11, 2012, at 5:17 AM, Christiaan Hofman  wrote:
>> 
>> 
>> I followed the steps above, or at least, tried my best.  It didn't work. The 
>> papers remained linked to the directory called Papers-1 wherever I moved it.
> 
> In the above I assumed they were linked in the (old) Papers. Not some other 
> place like Papers-1. If they link there, they won't be relinked to some old 
> location, and there's no way to tell them to. So you need to move the folder 
> where they are linked to back to the (old) location first. Or you start the 
> whole thing from Papers-1.
> 
>> This, even after I deleted the preferences file, selected and re-selected 
>> Papers.
> 
> Preferences, again, are completely irrelevant for this. that is *only* for 
> auto-filing (looking up is not filing).
> 
>> I created a disk image and put the Papers-1 directory on it, and then 
>> ejected it, so it could no longer be found. Now none of the PDF's will link 
>> to any folder, including Papers-1, no matter where I move it.
>> 
> 
> Putting papers on an external volume is dangerous. You cannot just move them 
> there from outside BibDesk, because then BibDesk will loose them. This is 
> because the files won't be moved, but rather they're copied (you can't move 
> between disks, only copy). And then both the file identity and the (absolute 
> and relative) path changes, which means all links are severed. The only way 
> you can do this is if you move *both* the files and the .bib file at the same 
> time (with BibDesk not opening the .bib file), so that the relative paths 
> remain the same.
> 
> It is not completely clear where your setup stands at this point. I hope you 
> have a backup (that works), otherwise you may not be able to get the links 
> back.
> 
> HTH

Unfortunately, I think I have mangled things so badly that I am going to have 
to reattach all the files by hand. I will take a look at the Applescripting 
possibilities. The PDF's are named using the cite keys as a basis, so it will 
be pretty easy to connect the PDF with the record.

I suppose I couldn't just leave well enough alone!

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Re: [Bibdesk-users] AuthorOrEditor in autofiling

[Dr. Adam M. Goldstein PhD MSLIS]

On Jan 8, 2013, at 13:59, James Harrison  wrote:

> On Jan 8, 2013, at 1:37 PM, Dr. Adam M. Goldstein PhD MSLIS 
>  wrote:
> 
>>> I think it would be reasonable to have at least one default choice that 
>>> allows authorOrEditor, as many people will have reference lists that may 
>>> include articles and books, and the books may have editors rather than 
>>> authors. 
>> 
>> I can second this. Many times I fill in the author field with editor's name, 
>> generate the cite key and autofile name, and then delete the name in the 
>> author field. 
> 
> 
> Just FYI, this is relatively easy to fix in the interim by going to both the 
> auto file and cite key panels in preferences, clicking "Advanced," and then 
> changing %a to %p in the format string (leave everything else the same). This 
> will drop back to using the editor name if there is no author name.
> 

Thanks, that's useful. I didn't realize that %p would go to editor if no author 
is found!

> Jim Harrison
> UVA

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Re: [Bibdesk-users] AuthorOrEditor in autofiling

[Dr. Adam M. Goldstein PhD MSLIS]

On Jan 8, 2013, at 12:25 PM, James Harrison  wrote:

>  I think it would be reasonable to have at least one default choice that 
> allows authorOrEditor, as many people will have reference lists that may 
> include articles and books, and the books may have editors rather than 
> authors. 

I can second this. Many times I fill in the author field with editor's name, 
generate the cite key and autofile name, and then delete the name in the author 
field. 

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Re: [Bibdesk-users] Autofiling question

[Dr. Adam M. Goldstein PhD MSLIS]

On Dec 11, 2012, at 5:17 AM, Christiaan Hofman  wrote:

> This is not consistent. Are the linked files pointing to Papers or Papers-old?
> 
> And what happens with your .bib file? Is it on the volume where the old 
> Papers folder is, and where the Papers-WC will be? Is it also in the 
> repository, or outside it?
> 
> If it is in the repository, than things should just work, because the 
> relative path will always be the same.
> 
> Otherwise, you have to make sure that the relative path between the .bib file 
> and the papers will remain the same. So starting from a .bib file somewhere 
> else on the same volume, this is how it could work.
> 
> 0. Records are linked to files in Papers
> 1. Make sure the .bib database is closed and saved
> 2. Papers directory is imported in the repository
> 3. Old Papers directory is removed (moved)
> 4. Create a new working copy (checkout) in the old location Papers
> 5. Open the .bib database
> 6. The records should be linked to the new working copy in the old location, 
> as the relative path is the same
> 7. Make sure you save the .bib database to refresh the saved aliases (file 
> IDs)
> 8. If you want to put the WC somewhere else, you could *now* (after saving 
> and closing) move the Papers to Papers-WC
> 9. Then open the .bib database again, check the links are OK, and save it 
> again
> 
> Christiaan

I followed the steps above, or at least, tried my best.  It didn't work. The 
papers remained linked to the directory called Papers-1 wherever I moved it. 
This, even after I deleted the preferences file, selected and re-selected 
Papers. I created a disk image and put the Papers-1 directory on it, and then 
ejected it, so it could no longer be found. Now none of the PDF's will link to 
any folder, including Papers-1, no matter where I move it.

Any suggestions would be helpful!

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Re: [Bibdesk-users] Autofiling question

[Dr. Adam M. Goldstein PhD MSLIS]

On Dec 10, 2012, at 7:17 PM, Christiaan Hofman  wrote:

> 
> On Dec 11, 2012, at 0:04, Dr. Adam M. Goldstein PhD MSLIS wrote:
> 
> 
>> Now I would like to create a working copy of the directory, and have the 
>> records in my bibliography point to the papers in the repository. I am not 
>> sure how to do this and I don't want to unlink all of my PDF's :)
>> 
> 
> Where do they point to now?

To a folder I named Papers-old

> 
>> I moved the Papers directory that was uploaded to the repository to 
>> Papers-old, and then created a working copy called Papers. I figured that 
>> the references in the records would point to the files in the 
>> working-copy-Papers directory, which is identical to the initial directory.
> 
> What do you mean by "identical"?

All and only files with the same names as the initial directory.

> 
>> But the records all point to the files in Papers-old. Not what I want.
>> 
> 
> It may depend on whether you had the .bib file open how it behaves. When the 
> database is open, it will try to follow the linked files as they are moved. 
> If the .bib file was closed, then after opening it will try to resolve the 
> linked files by relative path first, and then by alias.
> 
>> I had the thought of selecting all of the records with attached files and 
>> telling BibDesk to autofile them, but that ended up moving the linked files 
>> into the new directory. I think a new file name was generated as well for 
>> the moved file so as not to have the same one as the file already there. I 
>> thought it would "re-lilnk" to the files in in the working-copy-Papers 
>> directory.
> 
> Different files are different files. Why would it re-link to different files? 
> Autofile moves files to a unique location, unless it's already there.

I thought it would just look for files with the same names, in the directory 
autofile was set to when they were filed. But, as you suggest, those files are 
not the same as those the records originally pointed to.

So, I think this describes what I want to do.

0. Records are linked to files in Papers.
1. The Papers directory is committed (imported) into the repository.
2. A new directory called Papers-WC is created by checking out the Papers 
directory. It has all and only files in the Papers directory.
3. Records point to the files in Papers-WC.

I hope this is more precise…any ideas? 

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[Bibdesk-users] Autofiling question

[Dr. Adam M. Goldstein PhD MSLIS]

Hi all

I just uploaded my Papers directory to an svn repository. I have the autofile 
preference set to put papers there. (To be precise, it's ~/Documents/Papers.) 
Now I would like to create a working copy of the directory, and have the 
records in my bibliography point to the papers in the repository. I am not sure 
how to do this and I don't want to unlink all of my PDF's :)

I moved the Papers directory that was uploaded to the repository to Papers-old, 
and then created a working copy called Papers. I figured that the references in 
the records would point to the files in the working-copy-Papers directory, 
which is identical to the initial directory. But the records all point to the 
files in Papers-old. Not what I want.

I had the thought of selecting all of the records with attached files and 
telling BibDesk to autofile them, but that ended up moving the linked files 
into the new directory. I think a new file name was generated as well for the 
moved file so as not to have the same one as the file already there. I thought 
it would "re-lilnk" to the files in in the working-copy-Papers directory.

OK, I don't know if people can follows this. If so, any help would be 
appreciated.

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[Bibdesk-users] Impending release

[Dr. Adam M. Goldstein PhD MSLIS]

Hi all

I'd like to do a release in two weeks or so---so, let's test out those nightly 
builds. 

Christiaan---Any particular areas we should be looking at?

Best to all

Adam

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Re: [Bibdesk-users] nightly builds down

[Dr. Adam M. Goldstein PhD MSLIS]

On Aug 22, 2012, at 3:50 PM, "Maxwell, Adam R"  wrote:

> 
> On Aug 22, 2012, at 10:47, Adam M. Goldstein wrote:
> 
>> On Aug 22, 2012, at 13:08, "Fischlin  Andreas" 
>>  wrote:
>> 
>>> Stick pleeeaaase with 3.2.6 and support for 10.6 is still there. Moreover, 
>>> if you do not make use of fancy stuff only available from ML, this should 
>>> be no problem, isn't it?
>>> 
>> 
>> That's the idea, to keep support for as long as possible.
> 
> In my opinion, BibDesk needs to transition to Xcode 4 as soon as possible, if 
> there's any hope of continuing development.  Requiring compilation with tools 
> that can't be installed on the last two major OS releases is going to cause 
> trouble down the road.
> 

What is required to transition to Xcode 4? 

> Compiling with Xcode 4 & 10.7 or 10.8 SDK doesn't necessarily mean that 10.6 
> support will be dropped, but it does require dropping 10.5 support.  It's not 
> as if older versions of BibDesk would suddenly stop working on 10.5, 
> anyway…or even 10.6.
> 
> -- 
> Adam
> 
> 
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Re: [Bibdesk-users] nightly builds down

[Dr. Adam M. Goldstein PhD MSLIS]

On Aug 21, 2012, at 9:45 AM, Adam R. Maxwell  wrote:

> Nightly builds are down until I can get the script switched to use my dropbox 
> account for hosting them.
> 
> Since we've lost the nightlies, it would be nice to get a release out ASAP 
> because of that data loss bug that occurs on 10.7/10.8.
> 

Gah. Data loss bug.

I am now on 10.8. Any advice about how to build with XCode would be 
appreciated. Stick with 3.2? My impression is that support for 10.6 is now 
being dropped. 

> -- adam
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Re: [Bibdesk-users] New reference not cited in document

[Dr. Adam M. Goldstein PhD MSLIS]

On Aug 3, 2012, at 6:23 AM, Sebastian <273...@googlemail.com> wrote:

> I am using BibDesk Version 1.5.9 (2582) to cite references in a LaTex
> document in TeXShop Version 1.5.9 (2582).
> 
> I have added a reference to the library in BibDesk (only Author, Title and
> citekey), saved the library, draged the reference into my LaTex document,
> saved it, deleted all auxilliary files, restarted the computer (Mac 10.6.8)
> and still my footnote shows only the citekey in bold print, not the citation
> as all other references (which have been in the BibDesk library for months).
> 
> What can I do to have all (even new) citations appear correctly in the
> document?
> 

I take it you have run LaTeX and BibTeX enough times. You say the other 
citations appear as expected.

If you use the LaTeX preview window in BibDesk, what do you see? 

Are there any messages in the TeXShop output window about unresolved references?

I'm not a TeXShop user, so I wonder, why is the cite key in bold print?

Have you tried just keyboarding in the cite key?

Create another new dummy reference and see if that works.

I don't know what auxiliary files TeXShop deletes, but what happens if you go 
in manually and delete everything but your .tex file?

(Back up any files you think you might need by dragging them to the Desktop or 
something else to get them out of the way.)

> Thanks :)
> 
> 
> 
> --
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> Sent from the bibdesk users mailing list archive at Nabble.com.
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[Bibdesk-users] BibDesk 1.5.9

[Dr. Adam M. Goldstein PhD MSLIS]

Greetings all

The BibDesk development team is pleased to announce that a new version of 
BibDesk, version 1.5.9, is now available. This release is aimed primarily at 
bringing BibDesk up to date for the imminent release of TeX Live 2012. 

We thank the users who have contributed to BibDesk development by sharing their 
experiences with BibDesk, and testing nightly builds. 

This release can be obtained by selecting "check for updates" in the "BibDesk" 
menu, visiting the Sourceforge downloads page at

https://sourceforge.net/projects/bibdesk/

or by visiting the BibDesk home page at

http://bibdesk.sourceforge.net/

or by following the link below, which will begin immediate download:

http://sourceforge.net/projects/bibdesk/files/BibDesk/BibDesk-1.5.9/BibDesk-1.5.9.dmg/download


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Re: [Bibdesk-users] [bibdesk-users] Autocomplete missing fields

[Dr. Adam M. Goldstein PhD MSLIS]

On May 30, 2012, at 7:29 PM, William Oquendo wrote:

> Hi everybody,
> 
> I am starting to use Bibdesk to handle an already existing .bib file. Some 
> entries are incomplete, for instance, they do not have the page field filled, 
> altough it exists if I look by using the doi or something. Since they are a 
> lot, I would like to know of there is a way to tell bibdesk to filll the 
> missing fields (how to specify them?) by using a given strandard procedure, 
> like following the doi info and/or consulting scholar.google.com. I know this 
> could be too ambitious because there is no standard/simple way to get the 
> bibtex info except for journals like PRE.
> Thanks in advance.
> 

Applescript?

> Best regards / Cordialmente,
> 
> William-Fernando Oquendo
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Re: [Bibdesk-users] iCloud support BibDesk

[Dr. Adam M. Goldstein PhD MSLIS]

On May 22, 2012, at 8:40 AM, Colin A. Smith wrote:

> On May 22, 2012, at 13:57, bibdesk-users-requ...@lists.sourceforge.net wrote:
> 
> 
> iCloud seems to solve this problem keeping the user from doing anything with 
> the files outside the control of the API. In a Dropbox syncing situation, I 
> think the best solution would be simply to tell users that syncing isn't 
> supported for files that they move around while one or more copies of BibDesk 
> is open. My main BibDesk library hasn't been moved in years, so to me and 
> probably a large fraction of other users, this is probably a reasonable 
> compromise. If that design compromise isn't acceptable, then I would agree 
> that there's currently no solution.
> 


I think that this isn't a good compromise. People are going to lose work, or be 
confused; someone might move a file around by accident, or forget that the 
files shouldn't be moved, or forget to quit BibDesk. I think this isn't 
something that we should put users at risk for. They will not appreciate being 
told, well, we told you so, you should't have moved the file around.

Maybe this is a good place for a fork for the expert user for whom syncing is 
really important.

There are other ways to sync, not from within an app, but using version control 
of some kind, for instance, having your bib files in an svn repository.

Adam

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Re: [Bibdesk-users] BibDesk 2 development?

[Dr. Adam M. Goldstein PhD MSLIS]

But anyone is welcome to continue development work on it, right?

On Apr 15, 2012, at 6:58 AM, Christiaan Hofman wrote:

> No.
> 
> Christiaan
> 
> On Apr 15, 2012, at 12:45, Christian Pleul wrote:
> 
>> Hey,
>> 
>> Is there an active development for BD2 or is it not be planned to release a 
>> version 2?
>> 
>> 
>> Best,
>> --
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>> 
>> 
>> -Because I'm the CEO, and I think it can be done.-
>> 
>> Steve Jobs, 2005
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[Bibdesk-users] Release of BibDesk 1.5.8

[Dr. Adam M. Goldstein PhD MSLIS]

Greetings all,

The BibDesk development team is pleased to announce the release of BibDesk 
1.5.8. Download the new release from the BibDesk home page at 
http://bibdesk.sourceforge.net/or, to download immediately, from 
http://sourceforge.net/projects/bibdesk/files/BibDesk/BibDesk-1.5.8/BibDesk-1.5.8.dmg/download.
 From BibDesk, choose BibDesk > Check for updates, which will initiate download 
of the new release.

We would like to thank the BibDesk and Mac-TeX users who continue to actively 
support BibDesk development by reporting bugs and suggesting and testing new 
features.

This is a bug fix release; the following changes have been made:
• Improved BibTeX parse error handling
• Fix MARC XML parsing for XML with additional attributes
• Avoid loss of file location that can happen due to Lion bug
• Ignore linked folders in export of BibTeX and Papers
• Broader support for Web of Knowledge

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[Bibdesk-users] Release?

[Dr. Adam M. Goldstein PhD MSLIS]

Hi all

There was some talk on the list about getting a release out because some bugs 
had been fixed. Was there any resolution of the issue?

Adam

aka, your friendly neighborhood BibDesk release engineer

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Re: [Bibdesk-users] beware of 10.7.3

[Dr. Adam M. Goldstein PhD MSLIS]

On Feb 5, 2012, at 5:18 PM, Christiaan Hofman wrote:

> 
> On Feb 5, 2012, at 21:08, Adam R. Maxwell wrote:
> 
>> 
>> On Feb 5, 2012, at 11:20 , Dr. Adam M. Goldstein PhD MSLIS wrote:
>> 
>>> Perhaps we should re-release when the bug fix is ready to go? I assume that 
>>> the one we're all talking about is the one that makes it so that some apps 
>>> won't open. Bibdesk is like that, the most recent release, at least.
>> 
>> First I've heard about that.  Does Christiaan know?  Do you have a crash 
>> report or console log errors?
> 
> There seems to be quite a bit of chatter about 10.7.3 crashes on the web. The 
> delta updater also seems to have been pulled, the combo updater does not seem 
> to have the problems. It's probably best to not upgrade to 10.7.3 if you 
> haven't done so yet, or at least use the combo updater. The combo updater can 
> also be used to fix a 10.7.3 install, it seems. Though it may be a problem to 
> get it when things crash all the time. I don't know for sure that the 10.7.3. 
> problems reported are exactly the problem we're talking about here, but I can 
> very well imagine that this particular problem can affect virtually every app.
> 

The problem I was having was that some of my apps (about half of them, 
including BD) crashed immediately on opening. The combo installer fixed the 
problem. For those using the combo, beware that "1 minute left" can mean more 
like an hour. 

Now all the apps work fine, including BD.

So, maybe the bug Adam noticed and the general 10.7.3 bug are different. 

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Re: [Bibdesk-users] beware of 10.7.3

[Dr. Adam M. Goldstein PhD MSLIS]

Perhaps we should re-release when the bug fix is ready to go? I assume that the 
one we're all talking about is the one that makes it so that some apps won't 
open. Bibdesk is like that, the most recent release, at least.

Adam

On Feb 5, 2012, at 11:42 AM, Adam R. Maxwell wrote:

> If your experience a crash on 10.7, please try the latest nightly build.  It 
> should have a workaround for the problem mentioned yesterday.
> 
> 
> 
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[Bibdesk-users] BibDesk 1.5.7

[Dr. Adam M. Goldstein PhD MSLIS]

The BibDesk development team is pleased to announce the release of BibDesk 
1.5.7. We thank users and developers on the BibDesk mailing lists for active 
discussion and testing. BibDesk is a great example of how open source software 
development can succeed. The new release can be found at

http://sourceforge.net/projects/bibdesk/files/BibDesk/BibDesk-1.5.7/BibDesk-1.5.7.dmg/download

Here are the release notes:

Changes since 1.5.6

New Features
•   New web parser for Microsoft Academic Search

Bugs Fixed
•   Fix hyphen replacement method for template
•   Fix end tags in HTML export template. Update this manually or 
revert from the preferences
•   Fix OpenMate tags support
•   Force redisplay of external group after refresh
•   Improve web group address field
•   Don't set default value for newly added fields
•   Improvements to error source editor
•   Ignore "plugin handled load" warnings in web group
•   Fix ACM web parser for changes in format
•   Fix gradient behind files on 10.7
•   Make sure auto file error window is shown

Changes since 1.5.5

Bugs Fixed
•   Fix crasher in updater on 10.5
•   Avoid a system bug on 10.7 in updater
•   Make sure Item URLs are properly written to the clipboard


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[Bibdesk-users] Ignore earlier posting

[Dr. Adam M. Goldstein PhD MSLIS]

Hello all

The posting I made earlier about problems with scrolling should be ignored. My 
preferences file has been deteriorating, apparently, because BD would not 
start, or else crash as soon as I tried to open a publication. (!!!) Trashing 
the preferences file fixed all the problems and now scrolling is back to normal.

Best

Adam

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[Bibdesk-users] Scrolling behavior in main table view

[Dr. Adam M. Goldstein PhD MSLIS]

Greetings all

I am tinkering with a build of BD I created last night from source, doing my 
own pre-release final sanity check. I noticed that I can scroll the main table 
view past the first or last reference on the table. Eg, if I am organizing my 
references by author, and there is an author whose last name is "Aaron" and so 
is at the top of the list, I can keep scrolling upwards so that the Aaron 
reference disappears under below the bottom border of the table. I cannot drag 
the scroll bar past the top of the table, however. 

The usual behavior on Lion is that it is possible to scroll upwards past the 
top border of something like this, but there is a spring-loaded bounce, so that 
there is a maximum height, at which someone can no longer scroll, and so that, 
upon letting go of the mouse button, the table will bounce back down to its 
highest level. Eg open a PDF in Skim and try to scroll upwards with the mouse 
and let go. 

Similar behavior occurs at the bottom of the table.

I take it that the behavior I report above is not the expected behavior.

I am using 10.7.2, 1.5.6 (2451). I have scrolling set to "Automatic depending 
on input device."

Adam

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[Bibdesk-users] Release

[Dr. Adam M. Goldstein PhD MSLIS]

Hi all

Judging by the absence of reports of problems on the users list, I take it that 
there are no objections to a new release.

Right?

Best

Adam

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Re: [Bibdesk-users] [Bibdesk-develop] fix for gradient background

[Dr. Adam M. Goldstein PhD MSLIS]

On Jan 15, 2012, at 3:00 PM, Adam R. Maxwell wrote:

> 
> On Jan 15, 2012, at 11:55 , Dr. Adam M. Goldstein PhD MSLIS wrote:
> 
>> Regarding the preparation for the new release, could users of pre-Lion OS's 
>> take a look at the source list color? I think Adam is referring to the 
>> gradient of the background on the left pane with the keywords, etc.
> 
> This change has not been incorporated into BibDesk, and is only relevant to 
> the file icon view(s).  There's a reason I sent that message to the dev 
> list...
> 

Ooops. 

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[Bibdesk-users] Fwd: [Bibdesk-develop] fix for gradient background

[Dr. Adam M. Goldstein PhD MSLIS]

Begin forwarded message:

> From: "Adam R. Maxwell" 
> Subject: [Bibdesk-develop] fix for gradient background
> Date: January 15, 2012 1:50:43 PM EST
> To: "About BibDesk development." 
> Reply-To: "About BibDesk development." 
> 
> FWIW, I have a patch for the FileView background color breakage on 10.7, 
> where the magic source list color no longer works.  It should be compatible 
> back to 10.5, but I've only tested it on 10.7.

Regarding the preparation for the new release, could users of pre-Lion OS's 
take a look at the source list color? I think Adam is referring to the gradient 
of the background on the left pane with the keywords, etc.

Adam G

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[Bibdesk-users] Preparing for a new release

[Dr. Adam M. Goldstein PhD MSLIS]

Greetings all

We are almost ready for a new release, so we would appreciate it if you can use 
the nightlies in the next few days and let us know if there are any issues we 
need to resolve before the release.

Best to all

Adam G.

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