Re: [ilugd] New machine, minor irritants

2008-09-08 Thread Naresh Narang

 I've played about with the disk scheduler and the
 buffering ratio 
 (/sys/block/sda/queue/scheduler 
 and /proc/sys/vm/dirty_background_ratio) and that seems to
 alleviate 
 the problem a bit, but it's still there, albeit much
 less than before.  
 On the other hand, I could be totally wrong about the cause
 of the 
 problem, and this could be mere symptomatic treatment.  So
 anyone have 
 a clue as to why these freezes happen, or a better solution
 for fixing 
 them?  The disk is otherwise writing at about 60MB/s (which
 I presume 
 is OK for a SATA).


See if you have disk cache turned off. If so turning ON disk write cache should 
alleviate this problem but you better have your box on UPS. 

 
 The other weird thing is the temperature sensors.  CPU
 temperatures show 
 up within limits (typically 55C plus/minus 5C), but two of
 the 
 temperatures are way out of whack:
 
 AUX Temp:   +127.0°C  (high = +80.0°C, hyst = +75.0°C) 
 ALARM  sensor = 
 thermistor
 
 Sys Temp:+74.0°C  (high = +17.0°C, hyst = +43.0°C) 
 ALARM  sensor = 
 diode
 

When I first saw my AMD CPU temp at 70 C I was alarmed too but I think it is 
normal for CPUs to have temp this high, since CPU is the hottest thing in the 
box, may be that is what your Sys temp is. No idea about AUX.


Regards,
--Naresh Narang


  

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Re: [ilugd] New machine, minor irritants

2008-09-08 Thread Ashish Shukla आशीष शुक्ल
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Raj Mathur writes:

[snip]

 My AMD64 desktop was on its last legs, so I got myself 1/2 a new 
 system -- Intel DG31PR motherboard, 4GB RAM, Core 2 Duo at 2533 MHz, 
 CoolerMaster cabinet.  Being cheap, I cannibalised my old hard disks 
 and SMPS.

 System booted up first shot with the old Debian kernel, and except that 
 somehow eth0 had got renamed to eth1

udev(7) is responsible. To fix the issue, edit
'/etc/udev/rules.d/??-persistent-net.rules' to suit you.

 (and X didn't work since it was configured for the old Radeon 7250
 card), it just recognised everything out of the box.  Amit Kalra, my
 hardware supplier, who had been anticipating a week-long odyssey of
 reconfiguration for the new hardware didn't say anything but I could
 tell by the way his eyes grew to twice their normal size as the system
 was booting that he was pretty damn impressed.  When 10 minutes of
 reconfiguration got the 'net and the graphics too fixed, his eyes
 moved into Quad size mode :) Go on Winduhs, do that and show us!

Quad size mode ?

 Now one of the things I'm facing is a slowdown of the system when it's 
 doing disk-write-intensive activities.  I believe this is because of 
 the huge amount of RAM -- Linux buffers disk writes, and when it does 
 start flushing the buffers to disk everything else freezes.  Firefox, 
 e.g. freezes for up to 20 seconds when the writes are in progress.

I've 2 GiB RAM, 2 SATA disks. And I've not expected this issue, unless I
copy some big files and then execute 'sync' :) . Which kernel version
are you running anyways ? May be your SATA controller is being used in
some kind of compatibility mode. Debian recently released a new kernel
for new hardware[1], may be shifting to that will fix the issue.

 I've played about with the disk scheduler and the buffering ratio 
 (/sys/block/sda/queue/scheduler 
 and /proc/sys/vm/dirty_background_ratio) and that seems to alleviate 
 the problem a bit, but it's still there, albeit much less than before.  
 On the other hand, I could be totally wrong about the cause of the 
 problem, and this could be mere symptomatic treatment.  So anyone have 
 a clue as to why these freezes happen, or a better solution for fixing 
 them?  The disk is otherwise writing at about 60MB/s (which I presume 
 is OK for a SATA).

With 4 GiB of RAM, I'm wondering how much disk is it caching. I hope
your swap is not dirtied by it, yet.

 The other weird thing is the temperature sensors.  CPU temperatures show 
 up within limits (typically 55C plus/minus 5C), but two of the 
 temperatures are way out of whack:

 AUX Temp:   +127.0°C  (high = +80.0°C, hyst = +75.0°C)  ALARM  sensor = 
 thermistor

 Sys Temp:+74.0°C  (high = +17.0°C, hyst = +43.0°C)  ALARM  sensor = 
 diode

 OK, the AUX is probably just some hardware or configuration glitch, 
 since it's constant at 127C.  However I'm a bit concerned about the Sys 
 temperature -- should it be 70C+ ?  Could it be a wrong reading, or do 
 I need to do something to fix this?  

These are mines, on idle use :).

CPU Temp:+68°C  (low  =  -127°C, high =  +127°C)   
Board Temp:  +51°C  (low  =  -127°C, high =  +127°C)  
Remote Temp: +49°C  (low  =  -127°C, high =  +127°C)   

 What /is/ the Sys temperature anyway?

% fgrep System /etc/sensors.conf
label temp2   System
label fan2System

To confirm which one is yours go through that file, and refer to the
section corresponding to I2C chip your box is having.

 Any help, pointers appreciated.  sensors output available on request.

References:
[1] - http://www.debian.org/News/2008/20080726

HTH
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Re: [ilugd] New machine, minor irritants

2008-09-08 Thread PJ
 
 Raj Mathur writes:
  System booted up first shot with the old Debian kernel, and except that 
  somehow eth0 had got renamed to eth1

Ashish Shukla आशीष शुक्ल [EMAIL PROTECTED] writes:
 udev(7) is responsible. To fix the issue, edit
 '/etc/udev/rules.d/??-persistent-net.rules' to suit you.

Yebbut udev persistence only came in on etch. Unless Raj is still running sarge?

PJ



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Re: [ilugd] New machine, minor irritants

2008-09-08 Thread Raj Mathur
On Monday 08 Sep 2008, Naresh Narang wrote:
  I've played about with the disk scheduler and the
  buffering ratio
  (/sys/block/sda/queue/scheduler
  and /proc/sys/vm/dirty_background_ratio) and that seems to
  alleviate
  the problem a bit, but it's still there, albeit much
  less than before.
  On the other hand, I could be totally wrong about the cause
  of the
  problem, and this could be mere symptomatic treatment.  So
  anyone have
  a clue as to why these freezes happen, or a better solution
  for fixing
  them?  The disk is otherwise writing at about 60MB/s (which
  I presume
  is OK for a SATA).

 See if you have disk cache turned off. If so turning ON disk write
 cache should alleviate this problem but you better have your box on
 UPS.

Hmm, that's an idea.  However, according to sdparm, cache is turned on:

Caching (SBC) mode page:
  WCE 1
  RCD 0

One issue could be that earlier (with 1GB of RAM) the amount of writes 
that Linux was caching was enough to fit into the SATA cache, whereas 
now with 4GB it's more than what the cache will handle.  Now I need to 
test out this hypothesis by first figuring out how much cache the SATA 
drive has... any clue?  All dmesg says is that the cache is enabled, 
doesn't actually tell you the size.

  Sys Temp:+74.0°C  (high = +17.0°C, hyst = +43.0°C)
  ALARM  sensor =
  diode

 When I first saw my AMD CPU temp at 70 C I was alarmed too but I
 think it is normal for CPUs to have temp this high, since CPU is
 the hottest thing in the box, may be that is what your Sys temp is.
 No idea about AUX.

Nah, CPUs, like I said, are at 55C +/-5C (depending on how many bzip2's 
I'm running to test the temperatures with :) .  Sys is something 
else...

Regards,

-- Raju
-- 
Raj Mathur[EMAIL PROTECTED]  http://kandalaya.org/
   GPG: 78D4 FC67 367F 40E2 0DD5  0FEF C968 D0EF CC68 D17F
PsyTrance  Chill: http://schizoid.in/   ||   It is the mind that moves

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Re: [ilugd] New machine, minor irritants

2008-09-08 Thread Raj Mathur
On Monday 08 Sep 2008, Ashish Shukla आशीष शुक्ल wrote:
 Raj Mathur writes:
 [snip]
  Now one of the things I'm facing is a slowdown of the system when
  it's doing disk-write-intensive activities.  I believe this is
  because of the huge amount of RAM -- Linux buffers disk writes, and
  when it does start flushing the buffers to disk everything else
  freezes.  Firefox, e.g. freezes for up to 20 seconds when the
  writes are in progress.

 I've 2 GiB RAM, 2 SATA disks. And I've not expected this issue,
 unless I copy some big files and then execute 'sync' :) . Which
 kernel version are you running anyways ? May be your SATA controller
 is being used in some kind of compatibility mode. Debian recently
 released a new kernel for new hardware[1], may be shifting to that
 will fix the issue.

Running 2.6.26 (which I believe is the latest).  And yes, the problem is 
exactly what you face when copying big files and then running sync, 
except in this case it's writing large data and then freezing when the 
internal, automatic cache flush happens.

 [snip]
 % fgrep System /etc/sensors.conf
 label temp2   System
 label fan2System

 To confirm which one is yours go through that file, and refer to the
 section corresponding to I2C chip your box is having.

Hmm, I think I'll take this to the lm-sensors mailing list -- could be a 
bug in sensors.  Have also asked Amit to check the corresponding 
temperatures on Winduhs machines using the same motherboard, let's see 
if that gives us any information.

Regards,

-- Raju
-- 
Raj Mathur[EMAIL PROTECTED]  http://kandalaya.org/
   GPG: 78D4 FC67 367F 40E2 0DD5  0FEF C968 D0EF CC68 D17F
PsyTrance  Chill: http://schizoid.in/   ||   It is the mind that moves

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Re: [ilugd] New machine, minor irritants

2008-09-08 Thread Raj Mathur
On Monday 08 Sep 2008, PJ wrote:
 Raj Mathur [EMAIL PROTECTED] writes:
  Now one of the things I'm facing is a slowdown of the system when
  it's doing disk-write-intensive activities.  I believe this is
  because of the huge amount of RAM -- Linux buffers disk writes, and
  when it does start flushing the buffers to disk everything else
  freezes.  Firefox, e.g. freezes for up to 20 seconds when the
  writes are in progress.

 Did vmstat suggest lots of page outs at the same time?

Didn't look.  Will have to reset the tuning I've done, run recollindex 
and check.

 Did you try lowering swappiness ?

Would that help?  I doubt if swap is the issue here (all programs fit 
fine into memory, and there's 2.5G+ of memory available after 
discounting buffers).

IAC, will test again after untuning :)

Regards,

-- Raju


 PJ



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Re: [ilugd] New machine, minor irritants

2008-09-08 Thread Naresh Narang
 
  See if you have disk cache turned off. If so turning
 ON disk write
  cache should alleviate this problem but you better
 have your box on
  UPS.
 
 Hmm, that's an idea.  However, according to sdparm,
 cache is turned on:
 
 Caching (SBC) mode page:
   WCE 1
   RCD 0
 
 One issue could be that earlier (with 1GB of RAM) the
 amount of writes 
 that Linux was caching was enough to fit into the SATA
 cache, whereas 
 now with 4GB it's more than what the cache will handle.
  Now I need to 
 test out this hypothesis by first figuring out how much
 cache the SATA 
 drive has... any clue?  All dmesg says is that the cache is
 enabled, 
 doesn't actually tell you the size.
 


Cache is usually small and kernel is supposed to handle that part, I don't 
think it can be increased. To me it looks like there is a problem with paging 
activity. Is there a pager module running?



Regards,
--Naresh Narang


  

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Re: [ilugd] New machine, minor irritants

2008-09-08 Thread Mani A
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On Tue, Sep 9, 2008 at 12:30 AM,  Raj Mathur  wrote:


 Nah, CPUs, like I said, are at 55C +/-5C (depending on how many bzip2's
 I'm running to test the temperatures with :) .  Sys is something
 else...


You can try the phoronix test suite too.

Best

A. Mani


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-- 
A. Mani
Member, Cal. Math. Soc

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