Re: DateTime Select optimised

2005-03-21 Thread tibyke
 Select * from TABLE where date  _2005-01-07_ and date 
 DATE_ADD(_2005-01-07_, INTERVAL 24 HOUR)
 
 However is there a simpler way of doing it by just passing one date like
 
 Select * from TABLE where date = _2005-01-07_

you may also go for ... WHERE year(foo)=a AND month(foo)=b AND 
dayofmonth(foo)=c;

t

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Re: Fedora

2005-03-21 Thread Gleb Paharenko
Hello.



You may use netstat -nlpt to find open tcp ports and the name of the program to 
which each

socket belongs. If you see a listener on port 3306, then this is the source of 
the problem.





i?aki [EMAIL PROTECTED] wrote:

 Hi, in a fedora i  install mysql 4, i upgrading to mysql 4, but when i 

 put mysqld,  say can?t start server: bind on tcp/ip port,  before 

 restart computer when i put ps, appear an mysql_safe but now no, with 

 the same error.

 

 



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Re: myodbc on mandrake

2005-03-21 Thread Gleb Paharenko
Hello.



If you can't find rpms with this driver, you may 

install it manually. At first you should install unixODBC

or iODBC. Then install MyODBC using binary tarball. See:



  http://dev.mysql.com/doc/mysql/en/myodbc-unix-tarball-installation.html



Put the correct information in configuration files. See:



  http://dev.mysql.com/doc/mysql/en/dsn-on-unix.html









symbulos partners [EMAIL PROTECTED] wrote:

 Dear friends,

 

 I cannot locat the odbc driver for mysql in mandrake.

 

 Does anyone have an idea about the whereabouts of the thing?

 

 thanks in advance



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Re: Replication problem

2005-03-21 Thread Gleb Paharenko
Hello.



Error: 'Unknown MySQL server host

 'server5.domain.com' (1)'  errno: 2005 





Does the problem remain if you remove the following line

from the my.cnf on the server8:



  skip-networking









Chris Mason [EMAIL PROTECTED] wrote:

 I have two servers, server5.mydomain.com and server8.mydomain.com. I =

 want to

 replicate one database on server5 to server 8.

 I did the whole proceedure as recommended in

 http://dev.mysql.com/doc/mysql/en/replication-howto.html - 6.4. How to =

 Set

 Up Replication

 

 I setup the GRANT statement on server5 for the slave.

 

 mysql SHOW GRANTS FOR [EMAIL PROTECTED];

 +=

 ---

 ---+

 | Grants for [EMAIL PROTECTED]

 |

 +=

 ---

 ---+

 | GRANT RELOAD, SUPER, REPLICATION SLAVE ON *.* TO =

 'server8'@'MyServer8IP'

 IDENTIFIED BY PASSWORD 'xxx' |

 +=

 ---

 ---+

 1 row in set (0.00 sec)

 

 But when I stop and start the slave, I get:

 

 050316  8:56:42 [Note] Slave SQL thread initialized, starting =

 replication in

 log 'mysql-bin.04' at position 79, relay log

 './server8-relay-bin.01' position: 4

 050316  8:56:42 [ERROR] Slave I/O thread: error connecting to master

 '[EMAIL PROTECTED]:3306': Error: 'Unknown MySQL server host

 'server5.domain.com' (1)'  errno: 2005  retry-time: 60  retries: 86400

 

 When I try from the command line, I get it to work without problem:

 

 [EMAIL PROTECTED] mysql]# mysql -h server5.domain.com -u server8 -p

 Welcome to the MySQL monitor.  Commands end with ; or \g.

 Your MySQL connection id is 30 to server version: 4.1.10-standard-log

 

 Type 'help;' or '\h' for help. Type '\c' to clear the buffer.

 

 mysql=20

 

 

 

 Both /etc/my.cnf files are listed below

 

 [EMAIL PROTECTED] mysql]# cat /etc/my.cnf=20

 [mysqld]

 datadir=3D/var/lib/mysql

 socket=3D/var/lib/mysql/mysql.sock

 old_passwords

 skip-locking

 key_buffer =3D 256M

 max_allowed_packet =3D 1M

 table_cache =3D 256

 sort_buffer_size =3D 1M

 read_buffer_size =3D 1M

 read_rnd_buffer_size =3D 4M

 myisam_sort_buffer_size =3D 64M

 thread_cache =3D 8

 query_cache_size=3D 16M

 skip-networking

 sort_buffer=3D2M

 log-bin

 server-id=3D2

 log-slave-updates=20

 log-warnings=20

 replicate-ignore-db=3Dmysql

 

 replicate-do-db=3Danguillaguide

 

 [isamchk]

 key_buffer =3D 128M

 sort_buffer_size =3D 128M

 read_buffer =3D 2M

 write_buffer =3D 2M

 

 [myisamchk]

 key_buffer =3D 128M

 sort_buffer_size =3D 128M

 read_buffer =3D 2M

 write_buffer =3D 2M

 

 [mysqlhotcopy]

 interactive-timeout

=20

 [mysql.server]

 user=3Dmysql

 basedir=3D/var/lib

 

 [safe_mysqld]

 err-log=3D/var/log/mysqld.log

 pid-file=3D/var/run/mysqld/mysqld.pid

 

 [EMAIL PROTECTED] mysql]# cat /etc/my.cnf=20

 [mysqld]

 old-passwords

 max_connections =3D 500

 key_buffer =3D 16M

 myisam_sort_buffer_size =3D 64M

 join_buffer_size =3D 2M

 read_buffer_size =3D 2M

 sort_buffer_size =3D 3M

 table_cache =3D 1500

 thread_cache_size =3D 128

 wait_timeout =3D 14400

 connect_timeout =3D 10

 max_allowed_packet =3D 16M

 max_connect_errors =3D 10

 query_cache_limit =3D 1M

 query_cache_size =3D 32M

 query_cache_type =3D 1

 skip-innodb

 log-bin=3Dmysql-bin

 server-id=3D1

 

 [mysqld_safe]

 open_files_limit =3D 8192

 

 [mysqldump]

 quick

 max_allowed_packet =3D 16M

 

 [myisamchk]

 key_buffer =3D 64M

 sort_buffer =3D 64M

 read_buffer =3D 16M

 write_buffer =3D 16M

 

 Chris Mason

 Anguilla

 

 =20

 

 --=20

 No virus found in this outgoing message.

 Checked by AVG Anti-Virus.

 Version: 7.0.308 / Virus Database: 266.7.4 - Release Date: 3/18/2005

 =20

 

 



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Re: MySQL and phpMyAdmin

2005-03-21 Thread Gleb Paharenko
Hello.



I think you should rebuild php with the 4.1.10 libraries.

Search in the archives at 



  http://lists.mysql.com/mysql



about successful solution for similar problem(s). See:



  http://dev.mysql.com/doc/mysql/en/old-client.html







Asad Habib [EMAIL PROTECTED] wrote:

 I just installed phpMyAdmin, made the appropriate changes in the

 config.inc.php file, and got the following error when accessing it via

 both IE and Safari on Mac OS X Panther client.

 

 #1251 - Client does not support authentication protocol requested by

 server; consider upgrading MySQL client

 

 I am using MySQL 4.1.10, the latest stable release, with

 phpMyAdmin-2.6.1-pl3, which the documentation says are compatible. Any

 help would be greatly appreciated. Thanks.

 

 - Asad

 



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Re: DateTime Select optimised

2005-03-21 Thread Harald Fuchs
In article [EMAIL PROTECTED],
Pete Moran [EMAIL PROTECTED] writes:

 Hi All,
 Is there a simpler way of doing a select for a given date, for instance if I
 have a datetime field called date

 And so its populated with a load of values such as

 2005-01-07 09:00

 2005-01-07 10:00

 2005-01-07 11:00

 2005-01-07 12:00

 If I wanted all records which fall on 2005-01-07 I could of course do

 Select * from TABLE where date  ‘2005-01-07’ and date 
 DATE_ADD(‘2005-01-07’, INTERVAL 24 HOUR)

 However is there a simpler way of doing it by just passing one date like

 Select * from TABLE where date = ‘2005-01-07’

You could use

  WHERE cast(date AS DATE) = '2005-01-07'

but this would preclude using an index.


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Re: Queries inside UDF

2005-03-21 Thread Philippe Poelvoorde
sguazt sguazt wrote:
Hi!
From: Philippe Poelvoorde [EMAIL PROTECTED]
Reply-To: 'mysql@lists.mysql.com ' mysql@lists.mysql.com
To: mysql@lists.mysql.com
Subject: Re: Queries inside UDF
Date: Thu, 17 Mar 2005 08:22:46 +
..
You can actually access a DB within a UDF, but you should do the same 
than when you're using the C api of mysql. So you need a way to get 
database name, user/passwd and port without user-input, and do 
mysql_init, mysql_connect, mysql_query, and so on, like when you are 
accessing that database using a 'external' C program. Also bear in 
mind that it should be thread-safe ;)
a way to extend udf, is ... stored procedure ?

Yes I did it ... look my first post (http://lists.mysql.com/mysql/181361)
There you can find and example of a C-code I used to write my UDF ... 
but when using the UDF inside MySQL I've got Can't connect to MySQL 
server on 'localhost' (111)
you should check the permission.
Instead compiling the C-code as stand-alone program (removing the 
xxx_init/xxx_deinit functions and adding a main) all is OK, the query is 
executed and the program normally exits.
did you execute it on your DB server ? (not on your WS)
I can't use stored procedure because the target DB is the 4.0.21
Currently I'm working on MySQL 4.1.10a on my devel station ... but the 
production station is 4.0.21
(all installed as RPM x86).

So please look at the C-code and tell me if it's wrong ... as 
alternative you can post me a working example of UDF containing MySQL 
query execution.

Thanks!
-- Marco


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A complex normalisation problem in MySQL 4.0.20 (innodb engine)

2005-03-21 Thread symbulos partners
Dear friends

we have a problem here.

We have 3 tables

- table language (id int not null auto_increment primarykey, languageName 
tinytext)
- table country (id int not null auto_increment primarykey, defaultName 
tinytext, defaultLanguage tinytext)
- table countryToLanguage ((languageID int, countryID int) primary key, 
countryNameInLanguage tinytext)

in the table countryToLanguage, the column languageID is a foreign key 
referencing language (id)
in the table countryToLanguage, the column countryID is a foreign key 
referencing country(id)
in the table country, the column defaultLanguage is a foreign key referencing 
language(id)

In order for the database to be perfectly normalised, we think it the column 
defaultName in the table country should be a foreign key referencing back 
countryToLanguage ((languageID int, countryID int)).

What do you think? If you do that then there are lot of problems in updating 
the tables.




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Re: A complex normalisation problem in MySQL 4.0.20 (innodb engine)

2005-03-21 Thread SGreen
symbulos partners [EMAIL PROTECTED] wrote on 03/21/2005 08:08:53 AM:

 Dear friends
 
 we have a problem here.
 
 We have 3 tables
 
 - table language (id int not null auto_increment primarykey, 
languageName 
 tinytext)
 - table country (id int not null auto_increment primarykey, defaultName 
 tinytext, defaultLanguage tinytext)
 - table countryToLanguage ((languageID int, countryID int) primary key, 
 countryNameInLanguage tinytext)
 
 in the table countryToLanguage, the column languageID is a foreign key 
 referencing language (id)
 in the table countryToLanguage, the column countryID is a foreign key 
 referencing country(id)
 in the table country, the column defaultLanguage is a foreign key 
referencing 
 language(id)
 
 In order for the database to be perfectly normalised, we think it the 
column 
 defaultName in the table country should be a foreign key referencing 
back 
 countryToLanguage ((languageID int, countryID int)).
 
 What do you think? If you do that then there are lot of problems in 
updating 
 the tables.
 
 
 
 
 -- 
 symbulos partners
 -.-
 symbulos - ethical services for your organisation
 http://www.symbulos.com
 

I don't think so. You already have the country's name in it's own language 
on the countryToLanguage table, don't you? What name in which language is 
the defaultName column supposed to represent? If you can define what the 
*contents* of that field is supposed to be, then you should be able to 
decide on which table it should reside.

Normalization has a lot to do about reducing duplication. It appears that 
you have two fields that represent the name of a country. How many names 
does each country get to have in your database? What is the best way of 
storing the name(s) of a country that meets YOUR business needs?

Answer those questions and you will solve your problem.

Shawn Green
Database Administrator
Unimin Corporation - Spruce Pine



Re: DateTime Select optimised

2005-03-21 Thread Michael Stassen
Pintér Tibor (tibyke) wrote:
Select * from TABLE where date  _2005-01-07_ and date 
DATE_ADD(_2005-01-07_, INTERVAL 24 HOUR)
However is there a simpler way of doing it by just passing one date like
Select * from TABLE where date = _2005-01-07_

you may also go for ... WHERE year(foo)=a AND month(foo)=b AND 
dayofmonth(foo)=c;
t
That will work, but it will not use the index on foo, forcing a full table 
scan.
Michael
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Re: Converting Integer values to date type

2005-03-21 Thread Michael Stassen
Mahmoud Badreddine wrote:
I got it working , thank you.
I only could do what I wanted to do in multisteps however. I couldn't
figure out the nested querying , and it's bugging me.
Here's how I issued it.
mysql update tableDummy set newDate=(select
str_to_date('(concat(DayVal,.,MonthVal,.,YearVal))','%d.%m.%Y'));
That's because there is no nested querying needed here.  The syntax is SET 
col = newvalue.  This would have worked if you'd simply left out the select.

Also, there would be no need for STR_TO_DATE() if you use CONCAT() to put 
the string in the correct form in the first place.

Try
  UPDATE tableDummy
  SET newDate = concat(YearVal,-,MonthVal,-,DayVal)
instead.
Michael
And although I got an error, it did give all zero values for the
date(e.g -00-00)
no big deal now that I have what I want, but if someone can pick out
my error, would be greatly apreciated.
On Fri, 18 Mar 2005 13:31:14 -0600, Dan Nelson [EMAIL PROTECTED] wrote:
In the last episode (Mar 18), Mahmoud Badreddine said:
Hello,
I have a table with separate integer values for the day, month and year.
I would like to group them all under one field of type date.
I tried a few commands but I haven't captured the right syntax yet.
so if the field names are dayVal,monthVal and YearVal in talbeDummy
I am doing the following
select str_to_date(DayVal.MonthVal.YearVal,'%d.%m.%Y') from tableDummy;
CONCAT(DayVal, ., MonthVal, ., YearVal)
--
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   [EMAIL PROTECTED]


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Re: A complex normalisation problem in MySQL 4.0.20 (innodb engine)

2005-03-21 Thread symbulos partners
 I don't think so. You already have the country's name in it's own language
 on the countryToLanguage table, don't you? What name in which language is
 the defaultName column supposed to represent? If you can define what the
 *contents* of that field is supposed to be, then you should be able to
 decide on which table it should reside.

 Normalization has a lot to do about reducing duplication. It appears that
 you have two fields that represent the name of a country. How many names
 does each country get to have in your database? What is the best way of
 storing the name(s) of a country that meets YOUR business needs?

You pointed our  the problem.

The country has different names in different languages. One of the names is 
the default name. So you could introduce a flag default yes/no in table 
countryToLanguage.  Is that normalised? The answer should be yes, but you have 
to introduce an additional column, which increases the space hold by the 
table. Then if you normalise, you introduce un useful information (i.e. the 
information that a language is not the default language, which means filling 
the column with 0 when it is not the default).

What do you think?


 Answer those questions and you will solve your problem.

 Shawn Green
 Database Administrator
 Unimin Corporation - Spruce Pine

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functions md5, crypt

2005-03-21 Thread symbulos partners
Dear friends,

where is the description of the functions md5 in the manual? where is the 
description of the function crypt()?

are there are good alternatives?
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MySQL Driver

2005-03-21 Thread Ed
Does anyone know anything about the MySQL (3.x) Driver that comes installed 
with coldfusion? No luck with yahoo search or coldfusion documentation.

Hi all,
I am trying to create a datasource for mysql database. I tried using the 
mysql (3.x) driver but i got this error:
Connection verification failed for data source: DTD_Test
java.sql.SQLException: Communication failure during handshake. Is there a 
server running on 127.0.0.1:3306?
The root cause was that: java.sql.SQLException: Communication failure during 
handshake. Is there a server running on 127.0.0.1:3306?

I then found this post 
http://www.easycfm.com/forums/viewmessages.cfm?Forum=32Topic=5625 and i 
have been doing as it says: ColdFusion MX: Configuring the MySQL JDBC driver 
(MySQL Connector)
http://www.macromedia.com/cfusion/knowledgebase/index.cfm?event=viewid=KC.tn_19170extid=tn_19170dialogID=391691iterationID=1sessionID=4830d081ed2f$7E$3F$3stateID=0%200%20399545mode=simple

I downloaded the mysql-connector-java-3.1.7.zip file from and extracted ONLY 
the Executable jar file
mysql-connector-java-3.1.7-bin

to here:
C:\CFusionMX7\wwwroot\CFIDE\classes\mysql-connector-java-3.1.7\mysql-connector-java-3.1.7-bin.jar
Then in the ColdFusion Administrator, I clicked on the Java and JVM page. 
Entered the full path to the JAR file in the Class Path field.

C:\CFusionMX7\wwwroot\CFIDE\classes\mysql-connector-java-3.1.7\mysql-connector-java-3.1.7-bin.jar
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RE: functions md5, crypt

2005-03-21 Thread Tom Crimmins

On Monday, March 21, 2005 09:27, symbulos partners wrote:

 Dear friends,
 
 where is the description of the functions md5 in the manual? where is
 the description of the function crypt()?
 
 are there are good alternatives?

http://dev.mysql.com/doc/mysql/en/encryption-functions.html

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Interface Specialist
Pottawattamie County, Iowa

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Re: A complex normalisation problem in MySQL 4.0.20 (innodb engine)

2005-03-21 Thread SGreen
symbulos partners [EMAIL PROTECTED] wrote on 03/21/2005 10:25:27 AM:

  I don't think so. You already have the country's name in it's own 
language
  on the countryToLanguage table, don't you? What name in which language 
is
  the defaultName column supposed to represent? If you can define what 
the
  *contents* of that field is supposed to be, then you should be able to
  decide on which table it should reside.
 
  Normalization has a lot to do about reducing duplication. It appears 
that
  you have two fields that represent the name of a country. How many 
names
  does each country get to have in your database? What is the best way 
of
  storing the name(s) of a country that meets YOUR business needs?
 
 You pointed our  the problem.
 
 The country has different names in different languages. One of the names 
is 
 the default name. So you could introduce a flag default yes/no in table 
 countryToLanguage.  Is that normalised? The answer should be yes, 
 but you have 
 to introduce an additional column, which increases the space hold by the 

 table. Then if you normalise, you introduce un useful information (i.e. 
the 
 information that a language is not the default language, which means 
filling 
 the column with 0 when it is not the default).
 
 What do you think?
 
 
  Answer those questions and you will solve your problem.
 
  Shawn Green
  Database Administrator
  Unimin Corporation - Spruce Pine
 
 -- 
 symbulos partners
 -.-
 symbulos - ethical services for your organisation
 http://www.symbulos.com

I think you are on the right track. There can be several languages within 
a country and several countries for each language. That's why you chose 
the table model you have.

For each language-country association, it makes sense to qualify that 
association with additional information. Depending on my business needs I 
would probably go FARTHER than just marking an association as default or 
not and adding the native representation of the country's name. Some 
countries have multiple official languages (for instance, Canada has 
declared both French and English as their official languages. I think 
Switzerland has 3 or 4 official languages but I am not completely sure). 
In other countries the Official language may not be the one used most 
commonly (I think that Spanish is the Official language of the 
Philippines but Tagalog is a very common (if not the most common) dialect. 
The official Cantonese of China may not be the most commonly used 
language within that country). I guess how detailed you get with the data 
depends on how detailed the international information needs to be.

I would ask the people who are going to use this database what they need 
it for and how much detail your data needs to support. That way you get a 
sense of the granularity you need to provide.  This is one of those cases 
where relational databases are flexible enough to provide far more 
information than a situation may require.

Shawn Green
Database Administrator
Unimin Corporation - Spruce Pine
 




Re: functions md5, crypt

2005-03-21 Thread Michael Stassen
Tom Crimmins wrote:
On Monday, March 21, 2005 09:27, symbulos partners wrote:
Dear friends,
where is the description of the functions md5 in the manual? where is
the description of the function crypt()?
are there are good alternatives?
http://dev.mysql.com/doc/mysql/en/encryption-functions.html
Which is the first hit if you enter md5 crypt in the manual's search box.
Michael
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Wait for data to change

2005-03-21 Thread Ben Clewett
Dear MySQL,
I have an application which need to wait for some data to change, then 
act on this change.

I am polling the MySQL once a second using SELECT ...
I believe there is an alternate method where a thread can be made to 
wait for some change, therefore avoiding the expensive polling and 
improving performance.

If any member knows what this may be, I would be very interested.
Regards, Ben Clewett.
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Re: help on query/group by

2005-03-21 Thread mel list_php
Hi,
Sorry for the late reply, out for the week-end!
Here is the information you asked for (I modified the columns' type as you 
suggested)
mysql show create table matches\G
*** 1. row ***
  Table: matches
Create Table: CREATE TABLE `matches` (
 `protID` varchar(50) default NULL,
 `drugID` int(11) default NULL,
 `sentID` int(11) default NULL,
 KEY `sentenceId` (`sentID`),
 KEY `drugID` (`drugID`),
 KEY `protID` (`protID`)
) TYPE=MyISAM
1 row in set (0.00 sec)

mysql show create table sentence\G
*** 1. row ***
  Table: sentence
Create Table: CREATE TABLE `sentence` (
 `id` int(10) unsigned NOT NULL auto_increment,
 `text` text,
 `pmid` int(11) default NULL,
 PRIMARY KEY  (`id`)
) TYPE=MyISAM
1 row in set (0.00 sec)
mysql show create table synonyms\G
*** 1. row ***
  Table: synonyms
Create Table: CREATE TABLE `synonyms` (
 `nameID` varchar(50) default NULL,
 `syn` text,
 UNIQUE KEY `c` (`nameID`(20),`syn`(20))
) TYPE=MyISAM
1 row in set (0.01 sec)
I think I used int as much as possible,here some data samples:
INSERT INTO `matches` VALUES ('Q9UP51', 202531, 4);
INSERT INTO `matches` VALUES ('SVC2_HUMAN', 202037, 5);
INSERT INTO `matches` VALUES ('PF2R_SHEEP', 202096, 6);
INSERT INTO `matches` VALUES ('CAQS_RAT', 202037, 7);
INSERT INTO `sentence` VALUES (4, 'Of NP10 contraceptives /NPtested , 
NPspan class=\'drug\'Ortho-Gynol/span /NPwas found to be the most 
rapidly acting , followed by NPCooper Creme /NP, a 
href=\'http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?[UNIPROT-acc:(Q9UP51)]+-id+008+-view+UniprotDateView\'Lactikol- 
B/a\n, NPVagi-Serol /NP, NPMarvosan /NP, NPClinicol /NP, 
NPJelly-X /NP, NPBor-Oxyquin /NP, NPCellikol /NP, and 
NPLanteen Blue Jelly /NPin NPthat order /NP. ', 12305459);

(the text is usually longer than 255 characters, so I think text is the only 
choice, except longtext which can only be worst for indexation in my 
opinion)

INSERT INTO `synonyms` VALUES ('202037', 'testosterone');
INSERT INTO `synonyms` VALUES ('Q91XV1', 'gonadotropin');
INSERT INTO `synonyms` VALUES ('202037', 'estradiol');
INSERT INTO `synonyms` VALUES ('Q91XV1', 'gonadotropin-suppressing');
I tried to run the query you gave me (with temporary tables) it is still too 
long so I guess that my only solution now is to use indexes.
When modifying the columns' type from text to varchar, even if the text was 
indexed as unique mysql  complained about duplicates, and actually there 
were few duplicates, I thought it was as you said because only the beginning 
of the text field is indexed but I had 2 cases were the names were short 
(less than 15 characters) and the same (even the spaces).Removing one and 
the index on varchar was created. Any idea why?

I will try to play with the indexes, if I understand well I'd better index 
the three columns in once, because that will automatically index each of 
them?or am I wrong?

Anyway, thank you for all your advices, I'm really learning a lot of things 
with that case!
Melanie



From: [EMAIL PROTECTED]
To: mel list_php [EMAIL PROTECTED]
CC: mysql@lists.mysql.com
Subject: Re: help on query/group by
Date: Fri, 18 Mar 2005 12:43:06 -0500
mel list_php [EMAIL PROTECTED] wrote on 03/18/2005 10:35:30 AM:
 Hi again,

 Thanks for the explanation about the join and the group by.

 I wanted to test your query (almost a simple copy/paste :-)) ).

 The first 2 queries are ok, but the third one still is too long :
 mysql CREATE  TEMPORARY  TABLE tmpSynDrug(  KEY ( nameID (20))  )
SELECT
 nameID, max( syn )  AS drugSyn
 - FROM synonyms
 - WHERE syn
 - LIKE  'a%'
 - GROUP  BY nameID;
 Query OK, 9693 rows affected (1.07 sec)
 Records: 9693  Duplicates: 0  Warnings: 0

 mysql
 mysql CREATE TEMPORARY TABLE tmpSynProt (key (nameID(20)))
 - SELECT nameID, max(syn) as protSyn
 - FROM synonyms
 - WHERE syn LIKE 'a%'
 - GROUP BY nameID;
 Query OK, 9693 rows affected (1.03 sec)
 Records: 9693  Duplicates: 0  Warnings: 0

 mysql
 mysql CREATE  TEMPORARY  TABLE tmpMatch(  KEY ( sentID)  ) SELECT
m.sentID,
 m.drugID, m.protID, tsd.drugSyn, tsp.protSyn
 - FROM matches m
 - INNER  JOIN tmpSynDrug tsd ON tsd.nameID = m.drugID
 - INNER  JOIN tmpSynProt tsp ON tsp.nameID = m.protID;


 I've tried once this morning (GMT time), it ran for one hour nothing I
 killed mysql (btw, how can I kill only one query when mysql freezes?I
 aborted but then mysqladmin shutdown didn't work anymore..)
 I thought it was maybe because I have other heavy stuff running, but I
tried
 a second time now and it's been running for 2 hours now, with almost
nothing
 else on the desktop.
 So apparently the join between matches and the other tables is still too
 heavy
 Any idea?
snip
OK, I reviewed what you have posted so far and I found a performance
killer.  On the table matches, the columns protID and drugID are
declared as text. This is 

Re: Wait for data to change

2005-03-21 Thread SGreen
Ben Clewett [EMAIL PROTECTED] wrote on 03/21/2005 11:36:45 
AM:

 Dear MySQL,
 
 I have an application which need to wait for some data to change, then 
 act on this change.
 
 I am polling the MySQL once a second using SELECT ...
 
 I believe there is an alternate method where a thread can be made to 
 wait for some change, therefore avoiding the expensive polling and 
 improving performance.
 
 If any member knows what this may be, I would be very interested.
 
 Regards, Ben Clewett.
 

I can't think of any way to do this efficiently without a trigger, a 
UDF, and a custom daemon. I assume based on your description that you have 
some sort of client application that needs to know if some data value 
has changed. However, you don't want to keep pinging the server to 
continuously ask has it changed yet, has it changed yet, has it changed 
yet...

Here's how I think you can make this work with some sort of efficiency. 
You need to setup your application to connect to a daemon on some server 
somewhere. The only purpose of this daemon is to broadcast to those 
clients who connect to it a message to the effect that some data has 
changed on the table you are interested in. If you wanted to get really 
fancy, the message could say what data changed and possibly what the new 
value is. That way your client could possibly act on the data without 
needing to poll the server.

How does the daemon know that data just changed? That's where the trigger 
and UDF come in. Triggers are fired during certain database events (adding 
records, changing records, or deleting records). I don't know for certain 
but I believe triggers can use UDFs in their code. The UDF that is called 
by the trigger detecting a change in the table you are interested in is 
what notifies the daemon (described earlier) that the data has changed. 
And, because the UDF is only called from within a trigger, you only bother 
the daemon when a change actually occurs.

The downside to this design is that triggers are not supported until 5.x 
(still in testing) so I don't know if you have that option. User-defined 
functions (UDFs) may be able to cover the job by themselves IF and only if 
you can control data changes to ALWAYS use your UDF. Otherwise some 
changes may slip through the cracks.

Anyway, that was my idea. Is there any other way for you to communicate a 
change in data than a passive detect like you are doing? How much 
control do you have over what can and cannot change your data 
(specifically the field you keep polling)? What other application-based 
options are open to you?

Shawn Green
Database Administrator
Unimin Corporation - Spruce Pine



Re: help on query/group by

2005-03-21 Thread SGreen
My reply below:

mel list_php [EMAIL PROTECTED] wrote on 03/21/2005 11:49:26 AM:

 Hi,
 Sorry for the late reply, out for the week-end!
 
 Here is the information you asked for (I modified the columns' type as 
you 
 suggested)
 mysql show create table matches\G
 *** 1. row ***
Table: matches
 Create Table: CREATE TABLE `matches` (
   `protID` varchar(50) default NULL,
   `drugID` int(11) default NULL,
   `sentID` int(11) default NULL,
   KEY `sentenceId` (`sentID`),
   KEY `drugID` (`drugID`),
   KEY `protID` (`protID`)
 ) TYPE=MyISAM
 1 row in set (0.00 sec)
 
 mysql show create table sentence\G
 *** 1. row ***
Table: sentence
 Create Table: CREATE TABLE `sentence` (
   `id` int(10) unsigned NOT NULL auto_increment,
   `text` text,
   `pmid` int(11) default NULL,
   PRIMARY KEY  (`id`)
 ) TYPE=MyISAM
 1 row in set (0.00 sec)
 
 mysql show create table synonyms\G
 *** 1. row ***
Table: synonyms
 Create Table: CREATE TABLE `synonyms` (
   `nameID` varchar(50) default NULL,
   `syn` text,
   UNIQUE KEY `c` (`nameID`(20),`syn`(20))
 ) TYPE=MyISAM
 1 row in set (0.01 sec)
 
 I think I used int as much as possible,here some data samples:
 
 INSERT INTO `matches` VALUES ('Q9UP51', 202531, 4);
 INSERT INTO `matches` VALUES ('SVC2_HUMAN', 202037, 5);
 INSERT INTO `matches` VALUES ('PF2R_SHEEP', 202096, 6);
 INSERT INTO `matches` VALUES ('CAQS_RAT', 202037, 7);
 
 
 INSERT INTO `sentence` VALUES (4, 'Of NP10 contraceptives /NPtested 
, 
 NPspan class=\'drug\'Ortho-Gynol/span /NPwas found to be the 
most 
 rapidly acting , followed by NPCooper Creme /NP, a 
 href=\'http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?[UNIPROT-acc:
 (Q9UP51)]+-id+008+-view+UniprotDateView\'Lactikol- 
 B/a\n, NPVagi-Serol /NP, NPMarvosan /NP, NPClinicol /NP, 
 NPJelly-X /NP, NPBor-Oxyquin /NP, NPCellikol /NP, and 
 NPLanteen Blue Jelly /NPin NPthat order /NP. ', 12305459);
 
 (the text is usually longer than 255 characters, so I think text is the 
only 
 choice, except longtext which can only be worst for indexation in my 
 opinion)
 
 INSERT INTO `synonyms` VALUES ('202037', 'testosterone');
 INSERT INTO `synonyms` VALUES ('Q91XV1', 'gonadotropin');
 INSERT INTO `synonyms` VALUES ('202037', 'estradiol');
 INSERT INTO `synonyms` VALUES ('Q91XV1', 'gonadotropin-suppressing');
 
 I tried to run the query you gave me (with temporary tables) it is still 
too 
 long so I guess that my only solution now is to use indexes.
 When modifying the columns' type from text to varchar, even if the text 
was 
 indexed as unique mysql  complained about duplicates, and actually there 

 were few duplicates, I thought it was as you said because only the 
beginning 
 of the text field is indexed but I had 2 cases were the names were short 

 (less than 15 characters) and the same (even the spaces).Removing one 
and 
 the index on varchar was created. Any idea why?
 
 I will try to play with the indexes, if I understand well I'd better 
index 
 the three columns in once, because that will automatically index each of 

 them?or am I wrong?
 
 Anyway, thank you for all your advices, I'm really learning a lot of 
things 
 with that case!
 Melanie
 
 
 
 
 
 From: [EMAIL PROTECTED]
 To: mel list_php [EMAIL PROTECTED]
 CC: mysql@lists.mysql.com
 Subject: Re: help on query/group by
 Date: Fri, 18 Mar 2005 12:43:06 -0500
 
 mel list_php [EMAIL PROTECTED] wrote on 03/18/2005 10:35:30 
AM:
 
   Hi again,
  
   Thanks for the explanation about the join and the group by.
  
   I wanted to test your query (almost a simple copy/paste :-)) ).
  
   The first 2 queries are ok, but the third one still is too long :
   mysql CREATE  TEMPORARY  TABLE tmpSynDrug(  KEY ( nameID (20))  )
 SELECT
   nameID, max( syn )  AS drugSyn
   - FROM synonyms
   - WHERE syn
   - LIKE  'a%'
   - GROUP  BY nameID;
   Query OK, 9693 rows affected (1.07 sec)
   Records: 9693  Duplicates: 0  Warnings: 0
  
   mysql
   mysql CREATE TEMPORARY TABLE tmpSynProt (key (nameID(20)))
   - SELECT nameID, max(syn) as protSyn
   - FROM synonyms
   - WHERE syn LIKE 'a%'
   - GROUP BY nameID;
   Query OK, 9693 rows affected (1.03 sec)
   Records: 9693  Duplicates: 0  Warnings: 0
  
   mysql
   mysql CREATE  TEMPORARY  TABLE tmpMatch(  KEY ( sentID)  ) SELECT
 m.sentID,
   m.drugID, m.protID, tsd.drugSyn, tsp.protSyn
   - FROM matches m
   - INNER  JOIN tmpSynDrug tsd ON tsd.nameID = m.drugID
   - INNER  JOIN tmpSynProt tsp ON tsp.nameID = m.protID;
  
  
   I've tried once this morning (GMT time), it ran for one hour nothing 
I
   killed mysql (btw, how can I kill only one query when mysql 
freezes?I
   aborted but then mysqladmin shutdown didn't work anymore..)
   I thought it was maybe because I have other heavy stuff running, but 
I
 tried
   a second time now and it's been running for 2 hours now, with 

Re: Wait for data to change

2005-03-21 Thread Eric Bergen
You could make your polling query as light weight as possible. 
Create a new table with a single integer. When an update happens
increment that integer. Your polling query will then just be a select
from that table to see if the number has been incremented from the
last time it performed the operation. You can have several threads
polling this table server times per second without any noticable
performance impact (especially with the query cache).

-Eric


On Mon, 21 Mar 2005 11:57:00 -0500, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote:
 Ben Clewett [EMAIL PROTECTED] wrote on 03/21/2005 11:36:45
 AM:
 
  Dear MySQL,
 
  I have an application which need to wait for some data to change, then
  act on this change.
 
  I am polling the MySQL once a second using SELECT ...
 
  I believe there is an alternate method where a thread can be made to
  wait for some change, therefore avoiding the expensive polling and
  improving performance.
 
  If any member knows what this may be, I would be very interested.
 
  Regards, Ben Clewett.
 
 
 I can't think of any way to do this efficiently without a trigger, a
 UDF, and a custom daemon. I assume based on your description that you have
 some sort of client application that needs to know if some data value
 has changed. However, you don't want to keep pinging the server to
 continuously ask has it changed yet, has it changed yet, has it changed
 yet...
 
 Here's how I think you can make this work with some sort of efficiency.
 You need to setup your application to connect to a daemon on some server
 somewhere. The only purpose of this daemon is to broadcast to those
 clients who connect to it a message to the effect that some data has
 changed on the table you are interested in. If you wanted to get really
 fancy, the message could say what data changed and possibly what the new
 value is. That way your client could possibly act on the data without
 needing to poll the server.
 
 How does the daemon know that data just changed? That's where the trigger
 and UDF come in. Triggers are fired during certain database events (adding
 records, changing records, or deleting records). I don't know for certain
 but I believe triggers can use UDFs in their code. The UDF that is called
 by the trigger detecting a change in the table you are interested in is
 what notifies the daemon (described earlier) that the data has changed.
 And, because the UDF is only called from within a trigger, you only bother
 the daemon when a change actually occurs.
 
 The downside to this design is that triggers are not supported until 5.x
 (still in testing) so I don't know if you have that option. User-defined
 functions (UDFs) may be able to cover the job by themselves IF and only if
 you can control data changes to ALWAYS use your UDF. Otherwise some
 changes may slip through the cracks.
 
 Anyway, that was my idea. Is there any other way for you to communicate a
 change in data than a passive detect like you are doing? How much
 control do you have over what can and cannot change your data
 (specifically the field you keep polling)? What other application-based
 options are open to you?
 
 Shawn Green
 Database Administrator
 Unimin Corporation - Spruce Pine
 
 


-- 
Eric Bergen
[EMAIL PROTECTED]
http://www.ebergen.net

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Re: functions md5, crypt

2005-03-21 Thread symbulos partners
On Monday 21 Mar 2005 16:32, Michael Stassen wrote:
 Which is the first hit if you enter md5 crypt in the manual's search box.

I use the manual offline, because my connection is too slow.

I wonder why the encryption-function chapter is not in my manual.

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-.-
symbulos - ethical services for your organisation
http://www.symbulos.com

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Merge tables,trigger support, and table rotation

2005-03-21 Thread Jacob, Raymond A Jr
How does one insert records based on some kind of meta data or key in 
particular table belonging to a merge table?
I have a network logging program and would like to partition the table so that 
analysts can query certain tables belonging
to the merge table instead of the whold table to corelate events.  
/*merge table section of email */
Based on my limited research I thought that I would create a merged table such 
as: /*from the web site */
mysql CREATE TABLE t1 (
-a INT NOT NULL AUTO_INCREMENT PRIMARY KEY,
-message CHAR(20));
mysql CREATE TABLE t2 (
-a INT NOT NULL AUTO_INCREMENT PRIMARY KEY,
-message CHAR(20));
mysql INSERT INTO t1 (message) VALUES ('Testing'),('table'),('t1');
mysql INSERT INTO t2 (message) VALUES ('Testing'),('table'),('t2');
mysql CREATE TABLE total (
-a INT NOT NULL AUTO_INCREMENT,
-message CHAR(20), INDEX(a))
-TYPE=MERGE UNION=(t1,t2) INSERT_METHOD=LAST;

/* trigger section of email */
Question(s): I will assume of that when 5.02 becomes stable and  triggers are 
available 
then

mysql CREATE TRIGGER ins_sum  INSERT ON total
  IF message='happy ending' Then
 INSERT INTO t1 (message) VALUES ('goldie locks'),('mama 
bear'),('eat her up')
  ELSE INSERT INTO t2 (message) VALUES ('KILLED Mama bear'),('papa 
bear and baby bear'),
('in cirus');

Will triggers support insert, update, and delete verbs(actions) on a merged 
table?

/* table rotation */
Second question: As tables grow can can a new table be created and 
automatically added to the 
merged table, at or on a particular date or time or when the size of the table 
reaches a 
certain limit?


Which leads to the third question: if myisam tables can be created dynamically 
based
on size of table  or time of day, can the oldest table be compressed with 
myisampack
automatically?

Thank you,
Raymond




Re:ERROR 2013: Lost connection to MySQL server during query

2005-03-21 Thread TheRefUmp
Hi,
  I'm having a similar problem using the LOAD DATA. I get an intermittent error:
ERROR 2013 (HY000) at line 1: Lost connection to MySQL server during query

The command is:
LOAD DATA local infile 'pipefile'  into table FACT_TABLE  fields terminated by 
'~' lines terminated by '\n';  

I cannot seem to replicate it all the time. I have a PERL program that writes 
to the PIPE and MySQL reads the pipe. 

Did you have any success in figuring out the problem?
Regards,
George



sol beach [EMAIL PROTECTED] wrote:

I've tried looking up this error code on www.mysql.org  via Google.

I'm not sure it matters but if you look closely at the SQL below,
you can see it is working on file page_path.tab4.

It has already successfully loaded files page_path.tab1 thru  page_path.tab3

I seriously could use a CLUE on what needs to be changed to avoid this error.

TIA!

Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 183 to server version: 3.23.58-max

Type 'help;' or '\h' for help. Type '\c' to clear the buffer.

mysql LOAD DATA CONCURRENT LOCAL INFILE
'../data/mysql/initial_20050318_102517/page_path.tab4'
    - REPLACE INTO TABLE page_path 
    - FIELDS TERMINATED BY '^' OPTIONALLY ENCLOSED BY '' LINES
TERMINATED BY '\n'
    - (PAGE_PATH_ID,NAME,DATE_CREATED);
ERROR 2013: Lost connection to MySQL server during query
mysql 

[EMAIL PROTECTED]:/b/martgen/mysql/bingrep -i large show-variables.log
large_files_support     ON
[EMAIL PROTECTED]:/b/martgen/mysql/binuname -a
Linux sdb2.hitbox.com 2.4.21-4.ELsmp #1 SMP Fri Oct 3 17:52:56 EDT
2003 i686 i686 i386 GNU/Linux
[EMAIL PROTECTED]:/b/martgen/mysql/bin

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Re: functions md5, crypt

2005-03-21 Thread Martijn Tonies
Please stop writing high priority e-mails to a mailinglist.

Although the problem might be important for you, it's in no
way important for the receiver (which is quite a lot of people).

People will answer mailinglist questions for free, in their time.


I hope you understand.

--
Martijn Tonies


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Data Standards on Database Export-Import

2005-03-21 Thread Z X C V
Hello,
Are there any good rfcs or other documents that would assist in the 
discussion I'm having with our organization's Oracle programmers in 
regards the following:

Oracle DB - MySQL
They recommend:
~ col~col ~col~ col',~col
NOTE::I placed the ' in for a reason.
I am looking for:
col,col,col,col\'\,,col
Of course the non-Oracle system is being tasked as the problem in this 
case for the abnormal data request.

Any help on this would be appreciated.
Rob.
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Recreate orphaned table from innodb

2005-03-21 Thread Paulo Lindoso
Dear all,

I have InnoDB files which I thought belonged to a certain database
within the DATA directory.

However when I re-installed these files and managed to restart MySQL,
any query will produce the following error in mysq.err

050321 23:42:00  InnoDB error:
Cannot find table urlmonitor/requestpath from the internal data
dictionary
of InnoDB though the .frm file for the table exists. Maybe you
have deleted and recreated InnoDB data files but have forgotten
to delete the corresponding .frm files of InnoDB tables, or you
have moved .frm files to another database?
Look from section 15.1 of http://www.innodb.com/ibman.html
how you can resolve the problem.
050321 23:42:00 [ERROR] E:\Arquivos de programas\MySQL\MySQL Server
4.1\bin\mysqld-nt: Can't open file: 'requestpath.InnoDB' (errno: 1)

As far as I know, I haven't either deleted/recreated InnoDB or moved FRM
files... They were all bunched up together.

The question is: how can I see the data stored in the InnoDB datafile so
that I can try and rebuild the FRM files or something like that??

Any ideas?

Thanks a lot...

Paulo Bernardo Lindoso
Systems Engineer
Datacraft do Brasil
[EMAIL PROTECTED]
Tel +55 11 3708-2324
Fax +55 11 3708-2301
http://www.datacraft.com.br
BLOCKED::BLOCKED::http://www.datacraft.com.br