Hi all,
I'm working on a protein that I believe is tetrameric based on AUC, gel
filtration, and crystallography. However, although my asymmetric unit has 4
chains, I cannot form the tetramer within the asymmetric unit. Instead, the
asymmetric unit has two half-tetramers ('dimers'), and each fu
Generating rotation/translation matrices for
biological assemblies
Hi all,
I'm working on a protein that I believe is tetrameric based on AUC, gel
filtration, and crystallography. However, although my asymmetric unit has 4
chains, I cannot form the tetramer within the asymmetric uni
Hi Erik,
Have you tried Achesym?
http://achesym.ibch.poznan.pl
Kowiel, M., Jaskolski, M. & Dauter, Z. (2014). ACHESYM: an algorithm and
server for standardized placement of macromolecular models in the unit cell.
Acta Cryst. D70, doi:10.1107/S1399004714024572.
Best
Ricardo Padua
On Sat, Feb 2
Try EPPIC (http://eppic-web.org), it will give you all possible symmetric
assemblies in your crystal and their constituent interfaces, listing the
symmetry operators too. See some help here http://eppic-web.org/ewui/#help
Jose
On Sat, 2 Feb 2019 at 16:42, Ricardo Padua wrote:
> Hi Erik,
>
> Hav
://www.ruppweb.org/new_comp/spacegroup_decoder.htm
Standard settings only.
Best, BR
From: CCP4 bulletin board On Behalf Of Klontz, Erik
Sent: Saturday, February 2, 2019 22:05
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] Generating rotation/translation matrices for biological
assemblies
Hi all
comp/spacegroup_decoder.htm
>
> Standard settings only.
>
>
>
> Best, BR
>
>
>
> *From:* CCP4 bulletin board *On Behalf Of *Klontz,
> Erik
> *Sent:* Saturday, February 2, 2019 22:05
> *To:* CCP4BB@JISCMAIL.AC.UK
> *Subject:* [ccp4bb] Generating rotation/t
ecoder.htm
Standard settings only.
Best, BR
From: CCP4 bulletin board mailto:CCP4BB@JISCMAIL.AC.UK>>
On Behalf Of Klontz, Erik
Sent: Saturday, February 2, 2019 22:05
To: CCP4BB@JISCMAIL.AC.UK<mailto:CCP4BB@JISCMAIL.AC.UK>
Subject: [ccp4bb] Generating rotation/translation matrice
contains a rotation matrix and a translation
> vector that should correspond to the same solution.
>
>
> Thanks everyone!
>
> Erik
>
> ------
> *From:* CCP4 bulletin board on behalf of Eleanor
> Dodson <176a9d5ebad7-dmarc-requ...@jisc
