[Patch v3] Worg org-protocol.org: Rename "Construct Org…" to "Using Org protocol"

2025-07-14 Thread Charles Choi
d first. 0001-org-protocol.org-Rename-Construct-Org-to-Using-Org-p.patch Description: Binary data 0002-org-protocol.org-Remove-Opera-section.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [Patch v2] Worg org-protocol.org: Rename "Construct Org…" to "Using Org protocol"

2025-07-10 Thread Charles Choi
Christian - Status update on review of this patch?

Re: [Patch v1] Worg org-protocol.org: Consolidate “Test your Org protocol setup” section

2025-07-08 Thread Charles Choi
Thanks! — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On Jul 8, 2025, at 4:26 AM, Max Nikulin wrote: > > Applied. > > See 3ba05932. HTML file will be updated when somebody else push another change

[Patch v2] Worg org-protocol.org: Rename "Construct Org…" to "Using Org protocol"

2025-07-03 Thread Charles Choi
Patch v2 (c5670fc0) Worg org-protocol.org: Rename "Construct Org…" to "Using Org protocol” submitted for review. 0001-org-protocol.org-Rename-Construct-Org-to-Using-Org-p.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [Patch v1] Worg org-protocol.org: Remove 3rd Party Applications Header

2025-06-27 Thread Charles Choi
an Org protocol store-link URL. Clicking on the open URL button in the Gnome Contacts app successfully stored a Org link in Emacs. Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [Patch v1] Worg org-protocol.org: Remove 3rd Party Applications Header

2025-06-26 Thread Charles Choi
h of my motivation to rewrite it. While I have tried to be mindful of previous contributors work on this, I would rather not treat it as gospel. — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [Patch v1] Worg org-protocol.org: Remove 3rd Party Applications Header

2025-06-26 Thread Charles Choi
ader (retain existing content) — END TEXT — I really don’t think there is much merit to keeping the Opera section as the link is stale and the guidance is likely too. I would be in favor of deleting it completely, not even mentioning it in the history. If there are no objections to the above amended text I can prepare a patch containing it. All my best - Charles Charles Y. Choi, Ph.D. kickingve...@gmail.com

[Patch v1] Worg org-protocol.org: Consolidate “Test your Org protocol setup” section

2025-06-25 Thread Charles Choi
Patch v1 (6e2231dc) for Worg org-protocol.org <http://org-protocol.org/>: Consolidate “Test your Org protocol setup” section submitted for review. 0001-org-protocol.org-Consolidate-Test-your-Org-protocol-.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

[Patch v1] Worg org-protocol.org: Remove 3rd Party Applications Header

2025-06-25 Thread Charles Choi
Patch v1 (addd8dcd) for Worg org-protocol.org: Remove 3rd Party Applications header submitted for review. 0001-org-protocol.org-Remove-3rd-party-applications.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [PATCH v5] WORG Org Protocol Page Rewrite

2025-06-24 Thread Charles Choi
> On Jun 24, 2025, at 4:00 AM, Max Nikulin wrote: > > Charles, do you plan further changes of org-protocol.org? Are you interested > in discussion of its modifications? - Although I claim no monopoly ownership of org-protocol.org, there are still parts of it that I think still n

Re: [PATCH v5] WORG Org Protocol Page Rewrite

2025-06-23 Thread Charles Choi
> On Jun 23, 2025, at 2:40 PM, Christian Moe wrote: > > Thanks! Applied now. (The build should happen in a few hours.) > > Yours, > Christian It’s out in the wild! Thanks again Max and Christian! Hopefully we’ll get an update for Windows users soon. All my best - Charl

[PATCH v5] WORG Org Protocol Page Rewrite

2025-06-22 Thread Charles Choi
Patch v5 (fbed0861) of org-protocol.org <http://org-protocol.org/> rewrite. > > Thank you very much for your careful attention to feedback, Charles! And > thanks to Max for yesterday's careful review, which covered everything I > spotted and quite a bit I didn't. >

[PATCH v4] WORG Org Protocol Page Rewrite

2025-06-22 Thread Charles Choi
change. > I find the following fragments at the end of sections for specific OSes > almost identical > I would consider moving a single instance to the common part. A remark on > macOS should not be annoying or distracting for Linux and Windows users. Those sections have been consolidated into the common section. 0001-org-protocol.org-Rewrite-for-2025.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

[PATCH v3] WORG Org Protocol Page Rewrite

2025-06-21 Thread Charles Choi
text that I moved to a new “Troubleshooting” section. > > Have you tried to export your variant? Subsection markup is escaped. For > stale content blindtext may be more appropriate than warningbox Blocks do not > allow headings inside however. Description list may be an alternative. The Acrobat reader section has been modified so that the headings are preserved. > I can not say that I like tables too much, but I would consider a table here > to avoid "Old style"/"New style" repetitions. > This section reformatted to use a table. > > Why you named it "Formats"? There was "remember:" scheme and > "org-protocol:/remember" sub-protocol (or protocol) and both have been > *removed*. They are not just obsolete now. Amended to use “Protocols” instead of “Formats”. Thanks again for the feedback Max. 0001-org-protocol.org-Rewrite-for-2025.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [Linux] WORG Patch 2/2 for Org Protocol Page

2025-06-17 Thread Charles Choi
Patch 5141b91f for org-protocol.org 2025-06-17 rewrite submitted for review. 0001-org-protocol.org-Rewrite-for-2025.patch Description: Binary data Thanks to all for all the feedback so far. Regards - Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Documentation bug in "(org) The open-source protocol"

2025-06-17 Thread Charles Choi
Extraneous '&' character in JavaScript bookmark, fragment "open-source?&" should be changed to "open-source?". https://orgmode.org/manual/The-open_002dsource-protocol.html — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [Linux] WORG Patch 2/2 for Org Protocol Page

2025-06-17 Thread Charles Choi
Ihor - Thanks! — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On Jun 17, 2025, at 11:57 AM, Ihor Radchenko wrote: > > Remember protocol has been removed 12 years ago, in > https://git.savannah.gnu.org/cgit/emacs/org-mode.git/commit/?id=65399674d

Re: [Linux] WORG Patch 2/2 for Org Protocol Page

2025-06-17 Thread Charles Choi
Is the remember protocol still handled for backward compatibility or is it now completely removed? The worg org-protocol.org page still states it is still handled. Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On Jun 17, 2025, at 9:58 AM, Charles Choi wrote: > > U

Re: [Linux] WORG Patch 2/2 for Org Protocol Page

2025-06-17 Thread Charles Choi
Understood. Will reflect that in my patch. Charles > On Jun 17, 2025, at 9:28 AM, Ihor Radchenko wrote: > > AFAIR, it is not 100% broken. It is broken after some version of > xdg-tools (discussed in the bug report). So, not all the users will be > affected.

Re: [Linux] WORG Patch 2/2 for Org Protocol Page

2025-06-17 Thread Charles Choi
Thanks for the heads up on XDG support for Org protocol being broken. I will amend accordingly. Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On Jun 17, 2025, at 3:51 AM, Max Nikulin wrote: > > On 31/05/2025 08:09, Charles Choi wrote: >> -***

Re: [remember] WORG Patch 2/2 for Org Protocol Page

2025-06-12 Thread Charles Choi
Hi Folks - Been preoccupied with WWDC this week; will have time early next week to fold in this thread’s feedback into a new patch which re-writes the org-protocol.org page. All my best - Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: WORG Patch 1/2 for Org Protocol Page

2025-06-04 Thread Charles Choi
owing action items: - Make a patch for “org-annotation-helper.org” - Declare it obsolete. - Link to current Org Protocol manual page. - Make a patch for “org-protocol.org” - Re-write document. Thanks again for the feedback and hopefully this will result in improved documentation for Org Protocol. Charles

Re: [macOS] WORG Patch 2/2 for Org Protocol Page

2025-06-04 Thread Charles Choi
y model became indistinguishable > from mobile OS where data are tightly sealed withing each app. I’d reflect that this is a direction that all the major OS vendors have gone with contemporary app packaging and distribution. UWP for Windows and Flakpak for Linux comes to mind. — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: WORG Patch 1/2 for Org Protocol Page

2025-06-03 Thread Charles Choi
Christian - Please provide guidance on policy for archiving obsolete WORG pages. Also request guidance on handling obsolete content on an existing WORG page. Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On Jun 3, 2025, at 5:11 AM, Max Nikulin wrote: > > I am s

Re: [macOS] WORG Patch 2/2 for Org Protocol Page

2025-06-03 Thread Charles Choi
tml_node/emacs/emacsclient-Options.html Thanks for the feedback - hopefully this reply clarifies my intent and the direction of my rewrite of the org-protocol.org page. — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: Timeout on manual.css when looking at orgmode.org

2025-06-02 Thread Charles Choi
Followup - Apparently my IP was accidentally banned as part of a mitigation implemented last week due to a DDoS attack on gnu.org <http://gnu.org/>. I’ve been unblocked, but noting this for others who might also be affected. Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: WORG Patch 1/2 for Org Protocol Page

2025-06-02 Thread Charles Choi
Amended patch for archive of org-annotation-helper.org per Max Nikulin feedback. 0001-Archive-org-annotation-helper.org.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: WORG Patch 1/2 for Org Protocol Page

2025-06-02 Thread Charles Choi
error. - Use #+begin_warningbox Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On Jun 2, 2025, at 3:06 AM, Max Nikulin wrote: > > On 31/05/2025 08:07, Charles Choi wrote: >> --- a/org-contrib/org-annotation-helper.org >> +++ b/archive/org-contrib/org-a

Re: Org Protocol Worg Maintenance?

2025-05-31 Thread Charles Choi
All good. Please let me know if the direction my two patches are taking is amenable with you. - Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On May 31, 2025, at 3:56 AM, Christian Moe wrote: > > Patches are generally encouraged. But sometimes it may helpful to

Timeout on manual.css when looking at orgmode.org

2025-05-31 Thread Charles Choi
Hi Folks - Still seeing an issue with loading manual.css from the browser since yesterday which was cross-confirmed with Corwin on IRC. This seems to impact all the manual documentation pages for Org. https://orgmode.org/manual/Protocols.html Any insights? - Charles — Charles Y. Choi

WORG Patch 2/2 for Org Protocol Page

2025-05-30 Thread Charles Choi
Interim snapshot of rewrite of Org Protocol page. This is still WIP, but intended to illustrate direction of changes to this document. 0002-Rewrite-Org-Protocol-Page-org-protocol.org.patch Description: Binary data — Charles Y. Choi, Ph.D. kickingve...@gmail.com

WORG Patch 1/2 for Org Protocol Page

2025-05-30 Thread Charles Choi
Archives org-annotation-helper.org <http://org-annotation-helper.org/> and snapshots org-protocol.org <http://org-protocol.org/> 0001-Archive-org-annotation-helper.org-and-org-protocol.o.patch Description: Binary data -- Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: Org Protocol Worg Maintenance?

2025-05-30 Thread Charles Choi
Christian - Thanks for the guidance. In terms of raising changes, should that be in the form of a patch or a written proposal? -Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On May 30, 2025, at 1:17 PM, Christian Moe wrote: > > As for process, I think what matt

Re: Org Protocol Worg Maintenance?

2025-05-30 Thread Charles Choi
Christian - Also there is a _lot_ of stale and obsolete information around Org Protocol. I’d like to delete it, but before doing so, is there an archive process for worg? Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On May 30, 2025, at 8:55 AM, Charles Choi wr

Re: Org Protocol Worg Maintenance?

2025-05-30 Thread Charles Choi
Christian - Thanks for the reply. As I anticipate a number of changes, is it better to have more commits for each change to explain them or to have a single commit? Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com > On May 30, 2025, at 2:27 AM, Christian Moe wrote: > >

Org Protocol Worg Maintenance?

2025-05-29 Thread Charles Choi
Hi Folks - Wondering if anybody is actively maintaining these worg pages. They seem quite stale. I'd be happy to contribute. https://orgmode.org/worg/org-contrib/org-protocol.html https://orgmode.org/worg/org-mac.html All my best - Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com

[BUG] Double slash in body text not captured in Org Protocol [9.7.30 (9.7.30-84f18c @ /Users/cchoi/.config/emacs/elpa/org-9.7.30/)]

2025-05-14 Thread Charles Choi
macs 30.1 (build 2, aarch64-apple-darwin24.3.0, NS appkit-2575.40 Version 15.3.1 (Build 24D70)) of 2025-02-27 Package: Org mode version 9.7.30 (9.7.30-84f18c @ /Users/cchoi/.config/emacs/elpa/org-9.7.30/) — Charles Y. Choi, Ph.D. kickingve...@gmail.com

[BUG] Agenda sortation generally ignores time-of-day [9.7.25 (9.7.25-bdf9f94 @ /home/charlest/.emacs.d/elpa/org-9.7.25/)]

2025-03-27 Thread Charles Tam
ny weird customizations. Here are the version numbers though: GNU Emacs 29.4 (build 1, x86_64-pc-linux-gnu, GTK+ Version 3.24.33, cairo version 1.16.0) of 2024-07-15 Package: Org mode version 9.7.25 (9.7.25-bdf9f94 @ /home/charlest/.emacs.d/elpa/org-9.7.25/) Package: Org mode version 9.6.15 (release_9.6.15 @ /usr/local/share/emacs/29.4/lisp/org/) Good luck, Charles

Re: [PATCH] lisp/org-collector.el: Add support for TBLFM

2025-03-20 Thread Charles Millar
Hi, On 2/27/25 1:17 PM, Ihor Radchenko wrote: Slava Barinov writes: Okay, let's merge this one, so it'll be available if someone wants to use it. Sure. Applied. https://git.sr.ht/~bzg/org-contrib/commit/f1f6b6ec812803ff9969325a82960fb3545a The recent exchange concerning Slava's propo

[BUG] org-persist--refresh-gc-lock now showing up after update to 30.1 [9.7.24 (9.7.24-7fa7a5 @ /Users/cchoi/.config/emacs/elpa/org-9.7.24/)]

2025-03-04 Thread Charles Choi
After updating to Emacs 30.1, I now see the error message in *Messages* Error running timer ‘org-persist--refresh-gc-lock’: (wrong-type-argument listp \...) So far running Org seems nominal, but thought I'd report this error message anyways. Remember to cover the basics, that is, what you exp

Re: [RFC] Insert reference to Org table cell or cell range from region selection (w/without mouse)

2024-10-21 Thread Charles Choi
immediately after a *t2* event. *** t4: move point back An up mouse event immediately after a *t3* event. Thanks and best regards - Charles

Request for comment: Adding feature to calculate Org table reference from selected text region

2024-10-19 Thread Charles Choi
hope that if the idea of it is appealing enough, an optimal implementation can be made by this group. Thanks and best regards - Charles — Charles Y. Choi, Ph.D. kickingve...@gmail.com

Re: [FR] Org babel: mixing multiple outputs (was: Output of R code block: only text or plot but not both? And only one "result" can be output?)

2024-06-05 Thread Berry, Charles
> On Jun 5, 2024, at 11:17 AM, Ihor Radchenko wrote: > > "Berry, Charles" writes: > >>> I am trying to have an R code block output both the results of a numerical >>> expression AND a plot, but if I set up the header arguments to display the >>

Re: Output of R code block: only text or plot but not both? And only one "result" can be output?

2024-06-05 Thread Berry, Charles
Giuseppe, > On Jun 3, 2024, at 6:47 AM, Giuseppe Pagnoni wrote: > > Hi, > > I am trying to have an R code block output both the results of a numerical > expression AND a plot, but if I set up the header arguments to display the > plot, the numerical outcome is not displayed. A simple examp

Re: Using Org-mode macros as LaTeX macros

2024-06-01 Thread Berry, Charles
Sebastien, One way to propagate values prior to export is to use named src blocks and noweb references to them. For example, the following code: --- #+name: orga-def #+begin_src latex :exports none my old school #+end_src #+begin_src latex :noweb yes \begin{titlepage} Some custom LaTeX h

BUG: org-todo-keywords-for-agenda is nil in custom agenda view

2024-05-29 Thread Charles Pence
things, I assume). You can find a reasonably minimal config that will reproduce the bug with emacs -Q here: https://github.com/minad/org-modern/discussions/211 I am not a mailing list member, so if you would like more detail please contact me off-list. Thanks for your help! Thanks, Charles

Re: SMART goals and bolding the first letter

2024-05-27 Thread Berry, Charles
Sharon, > On May 27, 2024, at 8:07 AM, Sharon Kimble > wrote: > > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA512 > > > How can I bold the first letter of a word please? I'm trying to do this - > > > - - *S*pecific - You don’t want a vague goal. > I think the usual approach i

Fwd: Bug: Final zero after decimal point is stripped when inline code evaluated

2024-05-07 Thread Charles Millar
Forwarded Message Subject: Re: Bug: Final zero after decimal point is stripped when inline code evaluated Date: Tue, 7 May 2024 10:25:05 -0400 From: Charles Millar To: Max Nikulin On 5/7/24 7:49 AM, Max Nikulin wrote: On 07/05/2024 03:05, Charles Millar wrote: I

Re: Bug: Final zero after decimal point is stripped when inline code evaluated

2024-05-06 Thread Charles Millar
On 5/6/24 12:42 PM, Ihor Radchenko wrote: Max Nikulin writes: On 06/05/2024 19:44, Ihor Radchenko wrote: Charles Millar writes: #+NAME: TABLE2 |22578.60| src_latex[:var printthis=TABLE2[-1,-1] :eval yes :results replace :exports results]{\num{printthis}} {{{results(@@latex:\num{22578.6

Re: Bug: Final zero after decimal point is stripped when inline code evaluated

2024-05-05 Thread Charles Millar
Forgot to include that i also used the numprint package. On 5/5/24 2:30 PM, Charles Millar wrote: Please note that in the second src_latex the zero is stripped from the results. The final zero is required for my purposes, i.e. dollars and cents. This occurs in both results and on export to

Bug: Final zero after decimal point is stripped when inline code evaluated

2024-05-05 Thread Charles Millar
Please note that in the second src_latex the zero is stripped from the results. The final zero is required for my purposes, i.e. dollars and cents. This occurs in both results and on export to pdflatex, Does org's evaluation cause this or does latex? I have attempted to use the siunutx and cur

Re: [BUG] Exporting lists of >100 items to markdown

2024-05-05 Thread Berry, Charles
Bastien, > On May 5, 2024, at 9:17 AM, Bastien wrote: > > Exporting the attached document with a list of >100 items results in a > misformed markdown list, with missing spaces at the beginning of items. > > Can anyone reproduce this? Yes. With Org mode version 9.6.6 I see that org-md-item ha

[BUG] Invalid search bound (wrong side of point) [9.6.25 ( @ /Users/cchoi/.config/emacs/elpa/org-9.6.25/)]

2024-04-15 Thread Charles Choi
Hi folks - Got this warning when running Org Agenda, thought I'd report it in. ⛔ Warning (org-element-cache): org-element--cache: Org parser error in 2024_04_07.org::#. Resetting. The error was: (error "Invalid search bound (wrong side of point)") Backtrace: " backtrace-to-string(nil) org-e

Re: Search and replace excluding code blocks?

2024-01-30 Thread Berry, Charles
> On Jan 29, 2024, at 3:47 PM, Vikas Rawal wrote: > > Hi all, > > Is it possible to search and replace a regex/string in an org file excluding > the code blocks from its scope? > > Say, I want to replace all opening quotes (") by backticks(``) in the text > but not in the code blocks. Is th

Re: Feature request: Allow export to convert broken links to plain text

2023-09-11 Thread Berry, Charles
Ryan, > On Sep 9, 2023, at 9:13 PM, Ryan C. Thompson wrote: > > So, this isn't an ideal solution, since it requires me to prefix any > potential offending links with "maybe:". But it's good enough for me. > It is good that you have a solution, albeit with the caveat you mention above. A coup

Re: [Pre-PATCH v2] Add the capability to specify lexical scope in tangled files (was: Add new :lexical header argument)

2023-07-15 Thread Berry, Charles
> On Jul 15, 2023, at 9:11 AM, Thomas S. Dye wrote: > > > Ihor Radchenko writes: > >> "Thomas S. Dye" writes: >> Am I correct that language-specific header arguments are not yet covered in the manual? I can't find any reference of "lexical" there. >>> >>> Yes, I believe so. L

Re: Preserving leading zeros

2023-05-28 Thread Berry, Charles
William, Have you considered http://gewhere.github.io/org-bibtex ?? Or using the approach therein, viz. use properties to store bib data in org? HTH, Chuck > On May 28, 2023, at 7:46 AM, William Denton wrote: > > I'm thinking about moving a personal library catalogue system into Org. This >

Re: [BUG] org-manual: Using bookmarklet for org-capture is no longer reliable

2023-01-31 Thread Charles Philip Chan
getting less and less useful because CSP (Content Security Policy) blocking them on many sites (for example Github)[2]. Charles Footnotes: [1] https://addons.mozilla.org/en-US/firefox/addon/org-protocol/?utm_source=addons.mozilla.org&utm_medium=referral&utm_content=search [2] https://github.com/vifon/org-protocol-for-firefox signature.asc Description: PGP signature

Re: [BUG] ob-R.el: extra empty data.frame columns generated from plain lists after recent change [9.6 (release_9.6-3-ga4d38e @ /usr/share/emacs/30.0.50/lisp/org/)]

2022-12-29 Thread Berry, Charles
Bastien et al, > On Dec 29, 2022, at 8:00 AM, Bastien Guerry wrote: > > I think it would make sense to convert Elisp lists into R lists > directly. Jeremie, would you be okay with this? > Perhaps there are some hiccups. The R `data.frame' type is a list with some added attributes. In that

Re: [BUG] Header-args :results output of code block don't take precedence above headline header-args [9.6 (release_9.6-32-gc59d6d @ /tmp/org/org-mode/lisp/)]

2022-12-09 Thread Berry, Charles
Rens, This is not a bug. Seee below. > On Dec 7, 2022, at 9:47 AM, Rens Oliemans wrote: > > Hi all, > > A code block with ":results output" as header argument still has its > output silenced if it's inside a headline with ":results none". MWE: > > 1. Create an .org file with the following con

Re: [BUG] ob-R.el: extra empty data.frame columns generated from plain lists after recent change [9.6 (release_9.6-3-ga4d38e @ /usr/share/emacs/30.0.50/lisp/org/)]

2022-12-05 Thread Berry, Charles
Hi Greg, > On Dec 5, 2022, at 4:41 PM, Greg Minshall wrote: > > hi, Charles, > >> This makes a list like '("a" "b" "c") into a data.frame with one column. > > 1. which version of Org are you running? > : Org mode version 9.

Re: [BUG] ob-R.el: extra empty data.frame columns generated from plain lists after recent change [9.6 (release_9.6-3-ga4d38e @ /usr/share/emacs/30.0.50/lisp/org/)]

2022-12-05 Thread Berry, Charles
> On Dec 4, 2022, at 6:43 PM, Greg Minshall wrote: > > i see this same behavior. to me, (org-babel-R-assign-elisp) seems to be > the problem, but it hasn't changed any time recently. (nor, if my =git > blame= is done correctly, has anything else in ob-R.el.) > > i don't understand how (org-

Re: Release 9.6

2022-12-01 Thread Charles Millar
On 12/1/22 18:10, Tim Cross wrote: Max Nikulin writes: On 29/11/2022 13:58, Bastien wrote: Last but not least: thanks to Ihor his truly amazing work and for being the de facto maintainer. I think, Ihor's role in this release is crucial. He spent a lot of time fixing bugs and reviewing pat

Re: [BUG] ob-R: session evaluation returns empty ouputs with Org 9.6 [9.6 ( @ /home/fsantos/.emacs.d/elpa/org-9.6/)]

2022-12-01 Thread Berry, Charles
> On Nov 30, 2022, at 5:48 PM, Ihor Radchenko wrote: > > William Denton writes: > >> I tried that, but it didn't fix it. :( > > Ok. I was able to reproduce on my side. > >> With a minimal setup, running the R block with a :session makes it ask where >> the >> working directory should be

Bug org-cycke fails after "replace-string" is

2022-11-29 Thread Charles Millar
Attached is an example 1. Open all headings etc. show the contents then Collapse all headings 2. Cycle First Heading to show its content 3. Cycle Second Heading to show only the subheadings, but not the content of each subheading 3. Cycle Subheading B, to show its content. 4. go to point-min an

Re: Init.el need just for org-mode?

2022-11-02 Thread Charles Millar
On 11/2/22 13:31, Renato Pontefice wrote: I’m sorry for this simply question, but I’m starting using emacs and org-mode and I made some confusion. Init.el Need just for org -mode? Not for emacs right? Thank you Renato Forgot to mention, and you may already be aware of this, use C-h v user

Re: Init.el need just for org-mode?

2022-11-02 Thread Charles Millar
On 11/2/22 13:31, Renato Pontefice wrote: I’m sorry for this simply question, but I’m starting using emacs and org-mode and I made some confusion. Init.el Need just for org -mode? Not for emacs right? You may use init.el (or .emacs of .emacs.d/init.el) file for all of emacs.not just Org mo

Re: 'make autoloads' works but 'make ; make autoloads' fails with a version mismatch?

2022-09-14 Thread Charles Philip Chan
> Thanks for reporting! > Fixed on main. > https://git.savannah.gnu.org/cgit/emacs/org-mode.git/commit/?id=2d3802658156153974f540877a82bf5a384a2ad4 Thanks that fix it for me too. Charles signature.asc Description: PGP signature

Re: Reinstalling compat fixed everything breaking

2022-09-14 Thread Charles Philip Chan
Warning (emacs): Org version mismatch. Make sure that correct ‘load-path’ is | set early in init.el This warning usually appears when a built-in Org version is | loaded prior to the more recent Org version. ` during "make install". I never had this problem before. Charles signatur

Re: Reinstalling compat fixed everything breaking

2022-09-14 Thread Charles Philip Chan
Warning (emacs): Org version mismatch. Make sure that correct ‘load-path’ is | set early in init.el This warning usually appears when a built-in Org version is | loaded prior to the more recent Org version. ` during "make install". I never had this problem before. Charles signature.asc Description: PGP signature

Re: substitutions in html export?

2022-07-18 Thread Berry, Charles
Kevin, > On Jul 17, 2022, at 1:54 PM, kevinbanjo wrote: > > When I look at the doc string for (org-macro-replace-all) it says: > > Optional argument KEYWORDS, when non-nil is a list of keywords, > as strings, where macro expansion is allowed. > > I tried passing it '("export-block") but it did

Re: substitutions in html export?

2022-07-17 Thread Berry, Charles
Kevin, > On Jul 17, 2022, at 10:18 AM, kevinbanjo wrote: > > > > On Sun, Jul 17, 2022 at 7:24 AM Ihor Radchenko wrote: > See inline calls in > https://orgmode.org/manual/Evaluating-Code-Blocks.html#Evaluating-Code-Blocks > > I did this and it didn't work (but the one outside the export bloc

Re: idea for capture anywhere in x

2022-06-10 Thread Charles Philip Chan
org/en-US/firefox/addon/org-protocol/?utm_source=addons.mozilla.org&utm_medium=referral&utm_content=search is working well for me. Charles signature.asc Description: PGP signature

Re: Bug: ob-R.el breaks when :session is specified

2022-05-15 Thread Berry, Charles
Um... > On May 15, 2022, at 2:46 AM, Christian Heinrich > wrote: > > I run > > emacs -q --load /tmp/init.el --file=/tmp/test.org > > with my /tmp/init.el being only > >> (require 'package) >> (package-initialize) >> (add-to-list 'load-path "~/.emacs.d/straight/repos/org/lisp/") >> (requi

Re: How to export to markdown programmatically without the table of contents?

2022-05-01 Thread Berry, Charles
> On May 1, 2022, at 2:20 AM, Marcin Borkowski wrote: > > Hi fellow Orgers, > > I'd like to export a Org-mode formatted string to markdown, but without > the table of contents. > > (org-export-string-as my-string 'md t '(toc nil)) > > didn't work (the ToC was still there). What am I missin

Re: handling as special special block in derived export

2022-01-19 Thread Berry, Charles
Matt, > On Jan 19, 2022, at 5:52 AM, Matt Price wrote: > > However, I'd really like to add a less verbose syntax, like this: > > #+begin_r-stack :frag (appear appear) > [[imglink1]] > [[imglink2]] > #+end_r-stack > > My question is: will the exporter preserve information from these header-like

Re: should a "wrapped" table result behave differently than one that is not?

2022-01-18 Thread Berry, Charles
Eric, > On Jan 18, 2022, at 9:05 AM, Eric S Fraga wrote: > > been wrapped in a RESULTS special block be different than one that is > not wrapped (beyond the wrapping, of course)? Specifically, wrapping > the results seems to cause org to ignore that ATTR_LATEX :center toggle > [1]. A minimal e

Re: Way to mark contents of an Org special block as verbatim?

2022-01-09 Thread Berry, Charles
> On Jan 9, 2022, at 8:58 AM, Kaushal Modi wrote: > > How do we disable Org from transforming this: > >E = -J \sum_{i=1}^N s_i s_{i+1} > > to this: > > >E = -J ∑i=1^N s\_i si+1 Ahh! Sorry! So, : (format "{{<%s>}}\n%s{{}}\n" type contents type) has the contents already pars

Re: Way to mark contents of an Org special block as verbatim?

2022-01-08 Thread Berry, Charles
> On Jan 8, 2022, at 3:29 PM, Kaushal Modi wrote: > >> What am I missing? >> >> It seems like you want your derived backend to transcode special blocks >> somewhat differently than the parent backend. And adding a special block >> export filter doesn't quite do the job. > > I tried out the

Re: Way to mark contents of an Org special block as verbatim?

2022-01-08 Thread Berry, Charles
> On Jan 6, 2022, at 11:46 AM, Kaushal Modi wrote: > > On Thu, Jan 6, 2022 at 2:33 PM Juan Manuel Macías > wrote: >> I just realized that there is a much simpler solution for your katex >> environment :-) >> >> You can use an example block, and define your custom environment using >> the attr

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-31 Thread Berry, Charles
Max, > On Dec 31, 2021, at 4:05 AM, Max Nikulin wrote: > > > Should some function a macro be provided to facilitate declaring languages as > data format (config files, JSON, YAML, etc.) rather than executable source > code? I think we already have this in the form of export blocks, viz. #+n

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-30 Thread Berry, Charles
Rudy, > On Dec 29, 2021, at 11:26 PM, Rudolf Adamkovič wrote: > > (Note: I do not know what ECM stands for.) ECM stands for =Exemple Complet Minimal=, per https://orgmode.org/worg/org-faq.html#ecm, which says "The term refers to test files that can reliably reproduce a bug with the minimal a

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-29 Thread Berry, Charles
Max, > On Dec 29, 2021, at 4:53 AM, Max Nikulin wrote: > > On 25/12/2021 02:52, Berry, Charles wrote: >> For that case, setting buffer or heading properties, such as: >> #+begin_src org >> :PROPERTIES: >> :header-args: :eval yes :exports results >>

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-25 Thread Berry, Charles
Rudy, Thanks for the comment, but ... > On Dec 25, 2021, at 1:37 PM, Rudolf Adamkovič wrote: > > I think we look at the problem from two different perspectives. You > look at the problem from the "how" perspective, whereas I look at it > from the "why" perspective. Sure, we can work around ev

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-24 Thread Berry, Charles
> On Dec 23, 2021, at 8:09 PM, Ihor Radchenko wrote: > > Rudolf Adamkovič writes: > >>> So, Org cannot distinguish between language backends that are simply >>> not loaded and the ones that do not define org-babel-execute:lang. >> >> Oh, if we have this architectural limitation in place, the

Re: exporter: How to get :file property on a src block in an exporter

2021-12-22 Thread Berry, Charles
> On Dec 22, 2021, at 2:16 PM, Yasushi SHOJI wrote: > > Hi, > > On Thu, Dec 23, 2021 at 3:22 AM Berry, Charles > wrote: >>> On Dec 22, 2021, at 8:07 AM, Yasushi SHOJI wrote: >>> On Thu, Dec 23, 2021 at 12:52 AM Yasushi SHOJI >>> wrote:

Re: exporter: How to get :file property on a src block in an exporter

2021-12-22 Thread Berry, Charles
> On Dec 22, 2021, at 8:07 AM, Yasushi SHOJI wrote: > > On Thu, Dec 23, 2021 at 12:52 AM Yasushi SHOJI > wrote: >> Then, why don't I have :file in the info? > > The :exports must be "file" to have the file name in the info. I used > to have "code" because > I wanted to export code with the

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-21 Thread Berry, Charles
> On Dec 21, 2021, at 2:53 PM, Rudolf Adamkovič wrote: > > I struggle to understand. Why do we need a customization? If Org knows > that some backend exists but has no execute function, why does it even > try to execute it? It cannot. Do I miss something? Sorry if my prior posts were garb

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-18 Thread Berry, Charles
> On Dec 18, 2021, at 11:57 AM, Charles Berry wrote: > > There are workable approaches under the current setup. > > - Also, when exporting it looks `org-babel-exp-results' does not attempt to run src blocks for which (fboundp (intern (concat "org-babel-execu

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-18 Thread Berry, Charles
> On Dec 18, 2021, at 1:49 AM, Ihor Radchenko wrote: > > "Berry, Charles" writes: > >> If I have a typo in the name of a language, the error message you quote >> tells me what my mistake was. >> >> I'd say that is a feature, not a bug

bug#52545: 29.0.50; Make org-babel-execute-buffer ignore irrelevant src blocks

2021-12-17 Thread Berry, Charles
> On Dec 16, 2021, at 8:51 PM, Kyle Meyer wrote: > > Rudolf Adamkovič: > >> I have a .org file with two kinds of src blocks: >> >> 1. sqlite blocks >> 2. bibtex blocks >> >> I want to execute all sqlite blocks with org-babel-execute-buffer. >> >> When I try to do so, org-mode complains: >>

:eval yes use and documentation

2021-12-16 Thread Charles Millar
Org mode version 9.5.1 (release_9.5.1-279-g8908fb @ /usr/local/share/org-mode/lisp/) GNU Emacs 28.0.50 (build 344, x86_64-pc-linux-gnu, GTK+ Version 3.24.23, cairo version 1.16.0) of 2020-12-31 Here is a use case. I have many files each with as many as 60 tables that are generated using ob -r

Re: reference a remote named block in #+CALL: line

2021-11-02 Thread Berry, Charles
Matt, > On Nov 2, 2021, at 3:19 AM, Matt Price wrote: > > I am getting used to calling library-of-babel functions with local data > structures as input variables, e.g. in this line: > > #+CALL: list2table(data=common-issues-list, order="rows") :results table > raw > > where `common-issues

Re: [PATCH] async process in R

2021-09-28 Thread Berry, Charles
Jeremie, > On Sep 28, 2021, at 12:34 AM, Jeremie Juste wrote: > > Thanks for the feedback. With the following patch, I made sure that > ess-inject-source is set to default before evaluating the buffer. > > So even if I set > (setq ess-inject-source 'function-and-buffer), I get the following > o

Re: [PATCH] async process in R

2021-09-27 Thread Berry, Charles
Jeremie, > On Sep 27, 2021, at 3:56 PM, Berry, Charles wrote: > > There is something in my init that doesn't play nice with this. (setq ess-inject-source nil) seems to be the culprit. Also note, even with ess-inject-source set to t, there is an indentation issue:

Re: [PATCH] async process in R

2021-09-27 Thread Berry, Charles
: > It may take me a while to figure out what it is. :-( HTH, Chuck > On Sep 27, 2021, at 1:28 PM, Jeremie Juste wrote: > > Hello Chuck, > > On Monday, 27 Sep 2021 at 18:28, Berry, Charles wrote: >> >> It looks like you have `(setq ess-eval-visibly t)

Re: [PATCH] async process in R

2021-09-27 Thread Berry, Charles
Jeremie, > On Sep 26, 2021, at 10:13 AM, Jeremie Juste wrote: > > But for the time being result output produces the following output. > > #+begin_src R :session *R* :results output :async > Sys.sleep(1) > print(1:5) > #+end_src > > #+RESULTS: > : > Sys.sleep(1) > : > print(1:5) > : [1] 1 2 3

Re: Org babel source blocks ignore buffer-local variables

2021-09-06 Thread Berry, Charles
> On Sep 6, 2021, at 1:53 AM, Dominik Schrempf > wrote: > > Thank you, this solution works. May I ask about the reasons of such a > distinction? [i.e. between exec-path and (getenv "PATH")] Well, this is how `shell' and `shell-command-on-region' both do it, and they seem to be the underly

Re: Org babel source blocks ignore buffer-local variables

2021-09-04 Thread Berry, Charles
> On Sep 4, 2021, at 5:30 AM, Dominik Schrempf > wrote: > > Hello, > > I use directory local environments with =envrc= [1], and run into trouble when > using (Bash) Org Babel source code blocks. The buffer local environment seems > to > be ignored (see the example at the bottom). > > This s

Fwd: Greater than, less than bug in emacs-lisp source block

2021-09-03 Thread Charles Millar
Thank you, Arthur. Forwarded Message Subject: Re: Greater than, less than bug in emacs-lisp source block Date: Fri, 03 Sep 2021 00:36:23 +0200 From: Arthur Miller To: John Kitchin CC: Charles Millar , emacs-orgmode@gnu.org John Kitchin writes: I think this issue is

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