Re: [Freesurfer] pial surface vs aseg in MTL

External Email - Use Caution Thanks Bruce! I was not aware of this basic design decision. If that is the case, will freesurfer disregard manual corrections to try to force inclusion of the hippocampus? I am using freesurfer to make cortical models for use with epilepsy surgery,

Re: [Freesurfer] pial surface vs aseg in MTL

Hi Aaron Yes, you won’t be able to get it to extend there. If it did it would miss all sorts of internal boundaries in the hippocampus so I don’t think it would be all that useful. Can you not just use the hippocampal subfield and amygdalar nucleus models in addition to the surfaces? Cheers Br

[Freesurfer] Passcode request

External Email - Use Caution Hello, I would like a passcode for the file: FS_7_2_0_ubuntu_18_04_06.ova.7z Is there any other license I will need to run this image and perform the processing? Thank you, Ray ___ Freesurfer mailing list

Re: [Freesurfer] Failed to load MRI error

External Email - Use Caution Hi, Just re-sending this message in case it didn't go through to the developers, I am still searching for a solution to this problem. I also found out that the originally converted mri.mgz , brainmask.mgz files are probably re-written - its fi

Re: [Freesurfer] Failed to load MRI error

What is inside your mri folder? And make sure you are not running out of disk space as that would cause the 0 length files Cheers Bruce On Apr 17, 2022, at 9:04 PM, HYE JUNG YOUN wrote:  External Email - Use Caution Hi, Just re-sending this message in case it didn’t go through to the

[Freesurfer] Recon process for skull-stripted data

External Email - Use Caution Hi, How can I run a recon process if I have just skull stripted data? I need surface and annot files. Does the process need the volume files produced before the skull-stripting process? Thanks in advance. Best, --Muhammed

Re: [Freesurfer] Passcode request

External Email - Use Caution hello, Am also searching for the password of the FS_7_2_0_ubuntu_18_04_06.ova.7z did u get an answer ? can u share it with me please ! thank you, On Mon, Apr 18, 2022 at 1:45 AM Robert French wrote: > External Email - Use Caution > > Hell

Re: [Freesurfer] rerunning on 7.2 with edited brainmask using hi-res

External Email - Use Caution Can someone confirm? Thx. Jim From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Alexopoulos, Dimitrios Sent: Tuesday, April 12, 2022 3:24 PM To: Freesurfer support list Subject: [Freesurfer] rerunning on 7.2 with edited brainmask using hi-r

Re: [Freesurfer] Passcode request

External Email - Use Caution Sending the info to your email shortly. - R. On Apr 17, 2022, at 20:43, Robert French wrote:External Email - Use CautionHello,I would like a passcode for the file:FS_7_2_0_ubuntu_18_04_06.ova.7zIs there any

Re: [Freesurfer] Passcode request

External Email - Use Caution Sending the info to your email shortly. - R. On Apr 17, 2022, at 22:16, Jabeur Mouna wrote:External Email - Use Cautionhello,Am also searching for the password of the  FS_7_2_0_ubuntu_18_04_06.ova.7zdid u get

Re: [Freesurfer] Virtual box password request

External Email - Use Caution Sending the info to your email shortly. - R. On Apr 15, 2022, at 11:44, Douglas GoodSmith wrote:External Email - Use CautionHello, I do not know if a previous request I made went through, sorry if this is a du

[Freesurfer] Passcode

External Email - Use Caution Hello, Can I get the passcode of the file : FS_7_2_0_ubuntu_18_04_06.ova.7z Please! Thank you. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/fr

Re: [Freesurfer] Passcode

External Email - Use Caution It was sent about 30 minutes ago.  You might want to check your junk or email filters if you do not see it. - R. On Apr 17, 2022, at 23:06, Jabeur Mouna wrote:External Email - Use CautionHello,Can I get the