External Email - Use Caution        

Hi, 

 

Just re-sending this message in case it didn't go through to the developers,
I am still searching for a solution to this problem. 

 

I also found out that the originally converted mri.mgz , brainmask.mgz files
are probably re-written - its file size changed to 0kB after I ran the code
I sent in my previous email. 

Where do you think I went wrong?

 

Thanks for your help. 

H

 

From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of HYE JUNG YOUN
Sent: Wednesday, April 13, 2022 9:39 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Failed to load MRI error

 

        External Email - Use Caution        

Dear freesurfer devleopers,

 

I am experiencing an error while loading freeview using the following code: 



 

This always worked for me but now when I try to load and view it, a message
"failed to load MRI" pops up on freeview after loading T1.mgz. 

 

>From the terminal it says: 

error:
mghRead(/Applications/freesurfer/7.2.0/subjects/211025/1079_4/mri/wm.mgz,
-1): read error

MRIread failed: Unable to read from
/Applications/freesurfer/7.2.0/subjects/211025/1079_4/mri/wm.mgz

 

Also, when I check the mri containing file, eg: 1079_4 folder, after loading
freeview, the folder contains automatically generated -v and -f file. 



I have seen a few similar errors on google and mail archive but they did not
solve my issue. 

I would very much appreciate any solution to this. 

 

Thank you in advance. 

 

Best, 

HJ

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