What is inside your mri folder? And make sure you are not running out of disk
space as that would cause the 0 length files
Cheers
Bruce
On Apr 17, 2022, at 9:04 PM, HYE JUNG YOUN <hyejung7...@amc.seoul.kr> wrote:
External Email - Use Caution
Hi,
Just re-sending this message in case it didn’t go through to the developers, I
am still searching for a solution to this problem.
I also found out that the originally converted mri.mgz , brainmask.mgz files
are probably re-written – its file size changed to 0kB after I ran the code I
sent in my previous email.
Where do you think I went wrong?
Thanks for your help.
H
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of HYE JUNG YOUN
Sent: Wednesday, April 13, 2022 9:39 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Failed to load MRI error
External Email - Use Caution
Dear freesurfer devleopers,
I am experiencing an error while loading freeview using the following code:
[image001.png]
This always worked for me but now when I try to load and view it, a message
“failed to load MRI” pops up on freeview after loading T1.mgz.
From the terminal it says:
error:
mghRead(/Applications/freesurfer/7.2.0/subjects/211025/1079_4/mri/wm.mgz, -1):
read error
MRIread failed: Unable to read from
/Applications/freesurfer/7.2.0/subjects/211025/1079_4/mri/wm.mgz
Also, when I check the mri containing file, eg: 1079_4 folder, after loading
freeview, the folder contains automatically generated –v and –f file.
[image002.png]
I have seen a few similar errors on google and mail archive but they did not
solve my issue.
I would very much appreciate any solution to this.
Thank you in advance.
Best,
HJ
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