External Email - Use Caution
Hello Megan,
The errors you list below usually result from running a version of Freesurfer
that does not match the operating system you are using, i.e., it looks like you
are trying to run the version built for Ubuntu linux,
7.2.0
External Email - Use Caution
Hi all,
I had a working distribution on an old system a few weeks ago, but now I'm
getting an error. Can anyone offer any troubleshooting ideas?
I am working on a shared server with a freesurfer distribution that I own.
Here is some system info:
Dear DTI Experts:
I wonder if there is anyone that might know a direction to look into this error?
I just need to know what program generates this "path.map.txt" for the tracula
script dmri_pathstats to run through.
dmri_pathstats --intrc START_610/dpath/lh.cst_AS_avg33_mni_bbr --dtbase
Cc: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu
Sent: Monday, June 24, 2013 1:01 PM
Subject: Re: [Freesurfer] Help with QDEC error
Hi Nick and Doug,
Can you suggest an alternative way if QDEC is unable to handle a single group?
I would like to run these analyses to address
...@yahoo.com
Cc: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu
Sent: Thursday, June 20, 2013 11:16 PM
Subject: Re: [Freesurfer] Help with QDEC error
I thought it would have worked with a single group. Maybe Nick knows
of the top of his head.
doug
On 6/20/13 12:36 PM
: Manish Dalwani manishdalw...@yahoo.com
To: Douglas Greve gr...@nmr.mgh.harvard.edu; freesurfer@nmr.mgh.harvard.edu
freesurfer@nmr.mgh.harvard.edu
Sent: Thursday, June 20, 2013 1:26 PM
Subject: Re: [Freesurfer] Help with QDEC error
Hi Doug,
I was out of town for a conference. Please see my
@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu
*Sent:* Thursday, June 20, 2013 1:26 PM
*Subject:* Re: [Freesurfer] Help with QDEC error
Hi Doug,
I was out of town for a conference. Please see my attachments. I have
the log file and screenshots of ill-matrix conditioning.
Thanks for your help!
Manish
Can you send the mri_glmfit.log file from
/Applications/freesurfer/subjects/qdec/Untitled ?
doug
On 6/14/13 4:57 PM, Manish Dalwani wrote:
Hello Freesurfers,
I am trying to run regression analyses within patients and one
variable of interest which adjusting for the nuisance variables age,
Hello Freesurfers,
I am trying to run regression analyses within patients and one variable of
interest which adjusting for the nuisance variables age, IQ, thickness. When i
select the group and the CD (variable of interest) and run analyses (DODS), I
get the following error:
Qdec 1.4
Dear Freesurfer's
I have been using (a slightly older version) Freesurfer on linux and it works
fine. I just recently installed freesurfer on the mac workstation OS X 10.8.1.
I get the following error:
server:subjects manishdalwani$ cd anat_5214
server:anat_5214 manishdalwani$ recon-all -i
It looks like you don't have permissions to that file. Try changing the
permission with chmod (need to change them for all your dicom files)
doug
On 06/03/2013 06:17 PM, Manish Dalwani wrote:
Dear Freesurfer's
I have been using (a slightly older version) Freesurfer on linux and
it works
Hi all,
I sent an email a couple of days ago but didn't get any answer yet...
I recently installed FreeSurfer in a virtual machine (Ubuntu).
I installed it according to the freesurfer website and another source.
http://mirko.windhoff.net/how_to/install_freesurfer_on_ubuntu
When I ran
do you have permission to write to that directory? Is the partition full?
On
Thu, 28 Apr 2011, Yunjo Lee wrote:
Hi all,
I sent an email a couple of days ago but didn't get any answer yet...
I recently installed FreeSurfer in a virtual machine (Ubuntu).
I installed it according to the
)
Linux dendrite 2.6.22.16-0.1-default #1 SMP 2008/01/23 14:28:52 UTC i686
i686 i386 GNU/Linux
recon-all exited with ERRORS at Thu Feb 28 16:34:58 CST 2008
I don't speak FreeSurfer and don't understand this error. Please help.
-Joel
___
Freesurfer
dendrite 2.6.22.16-0.1-default #1 SMP 2008/01/23 14:28:52 UTC
i686 i686 i386 GNU/Linux
recon-all exited with ERRORS at Thu Feb 28 16:34:58 CST 2008
I don't speak FreeSurfer and don't understand this error. Please
help.
-Joel
___
Freesurfer
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