Thanks for the reply!
Zhuonan
发件人: freesurfer-boun...@nmr.mgh.harvard.edu
[freesurfer-boun...@nmr.mgh.harvard.edu] 代表 Douglas N. Greve
[dgr...@mgh.harvard.edu]
发送时间: 2018年5月14日 15:02
收件人: freesurfer@nmr.mgh.harvard.edu
主题: Re: [Freesurfer] volume
Probably best to run recon-all on the mni152, then sample your 152 data
onto the surface, then use the surface-based registration.
On 05/10/2018 01:06 PM, Wang, Zhuonan wrote:
> Hi Team,
>
> I have a functional image which located in the FSL volume-based
> template(MNI152), and now I wanna to
Hi Team,
I have a functional image which located in the FSL volume-based
template(MNI152), and now I wanna to register this image to FS-based surface
template (MNI305).
How can I do this?
Please let me know how to do this!
PS: I'm not sure that the MNI152 is same as the FS's MNI152.
Hi,
When I used preproc-sess processing my data, the registration output is off a
great of deal. The functional data was collected using 7T, and the surface was
reconstructed successfully from 3T data and was checked visually multiple
times. I am using fs5.3 installed on a linux system.
The problem is probabably that the fsl flirt registration failed and
that caused bbr to fail. If you have spm and matlab installed, running
it with
cd /misc/data41/yuex/humanfMRI/human_curvature/subjdata/field090514
bbregister --s field --init-spm --6 --bold --mov bold/template.nii --reg
@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] volume to surface registration problem
The problem is probabably that the fsl flirt registration failed and
that caused bbr to fail. If you have spm and matlab installed, running
it with
cd /misc/data41/yuex/humanfMRI/human_curvature/subjdata
. Which version should I use? Also, how to change the spm
as the inital registration method in the preproc-sess?
Xiaomin
Date: Thu, 16 Oct 2014 12:00:04 -0400
From: gr...@nmr.mgh.harvard.edu
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] volume to surface registration problem
...@nmr.mgh.harvard.edu
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] volume to surface registration problem
I have not tested it with spm12, so use spm8. There is not currently a
way to run the spm init from preproc-sess, so you'll have to run it from
register-sess.
On 10/16/2014
, is
that right?
Thanks,
Xiaomin
Date: Thu, 16 Oct 2014 12:12:23 -0400
From: gr...@nmr.mgh.harvard.edu
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] volume to surface registration problem
I have not tested it with spm12, so use spm8. There is not currently a
way
