Hi all,
We’re putting together a proposal centered on HCP data, but can’t seem to find
a definitive ethics statement, apart from the Data Usage Agreement. I was just
wondering if the ethics for HCP data collection is published somewhere?
Thanks,
Andrew
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Hi users,
I am using the -cifti-separate command to generate a surface (i.e. CORTEX
RIGHT) to use as right surface input to the -cifti-find-clusters command.
The output from cifti-separate is not recognized. How do I convert it to a
format that will work with cifti-find-clusters? I tried -metric
Please post your wb_command -cifti-separate command line.
Peace,
Matt.
From: Marta Moreno
Date: Monday, January 12, 2015 at 9:52 PM
To: "hcp-users@humanconnectome.org"
Subject: [HCP-Users] -cifti-separate
Hi users,
I am us
wb_command COLUMN -metric CORTEX_RIGHT
Thanks,
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Marta Moreno-Ortega, Ph.D.
Postdoctoral Research Fellow
Division of Experimental Therapeutics
New York State Psychiatric Institute
Department of Psychiatry
Columbia University College of Physicians and Surgeons
On Jan 12, 2015, a
I didn’t read your question closely enough. You cannot make a surface from -cifti-separate (you can make data that you can display and analyze on a surface however).
Peace,
Matt.
From: Marta Moreno
Date: Monday, January 12, 2015 at 9:59 PM
To: Matt Glasser
What is the required surface input for -cifti-find-clusters?
Thanks,
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Marta Moreno-Ortega, Ph.D.
Postdoctoral Research Fellow
Division of Experimental Therapeutics
New York State Psychiatric Institute
Department of Psychiatry
Columbia University College of Physicians and Surgeons
Is this HCP data or your own data?
Matt.
From: Marta Moreno
Date: Monday, January 12, 2015 at 10:06 PM
To: Matt Glasser
Cc: "hcp-users@humanconnectome.org"
Subject: Re: [HCP-Users] -cifti-separate
Wha
Is data created by the HCP pipeline.
I made a t-map and saved it as a cifti file with 91K brain ordinates and I
would like to cluster extent thresholding using the -cifti-fiind-clusters
command but I am not sure what to use as the surface inputs files.
Thanks,
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Marta Moreno-Ortega
Use ${StudyFolder}/${Subject}/MNINonLinear/fsaverage_LR32k/${Subject}.${Hemisphere}.midthickness.32k_fs_LR.surf.gii
Peace,
Matt.
From: Marta Moreno
Date: Monday, January 12, 2015 at 10:15 PM
To: Matt Glasser
Cc: "hcp-users@humanconnect
Thank you I appreciate your help!
All the best,
___
Marta Moreno-Ortega, Ph.D.
Postdoctoral Research Fellow
Division of Experimental Therapeutics
New York State Psychiatric Institute
Department of Psychiatry
Columbia University College of Physicians and Surgeons
On Jan 12, 2015, at
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