[HCP-Users] Ethics statement

Hi all, We’re putting together a proposal centered on HCP data, but can’t seem to find a definitive ethics statement, apart from the Data Usage Agreement. I was just wondering if the ethics for HCP data collection is published somewhere? Thanks, Andrew ___

[HCP-Users] -cifti-separate

Hi users, I am using the -cifti-separate command to generate a surface (i.e. CORTEX RIGHT) to use as right surface input to the -cifti-find-clusters command. The output from cifti-separate is not recognized. How do I convert it to a format that will work with cifti-find-clusters? I tried -metric

Re: [HCP-Users] -cifti-separate

Please post your wb_command -cifti-separate command line. Peace, Matt. From: Marta Moreno Date: Monday, January 12, 2015 at 9:52 PM To: "hcp-users@humanconnectome.org" Subject: [HCP-Users] -cifti-separate Hi users, I am us

Re: [HCP-Users] -cifti-separate

wb_command COLUMN -metric CORTEX_RIGHT Thanks, ___ Marta Moreno-Ortega, Ph.D. Postdoctoral Research Fellow Division of Experimental Therapeutics New York State Psychiatric Institute Department of Psychiatry Columbia University College of Physicians and Surgeons On Jan 12, 2015, a

Re: [HCP-Users] -cifti-separate

I didn’t read your question closely enough.  You cannot make a surface from -cifti-separate (you can make data that you can display and analyze on a surface however). Peace, Matt. From: Marta Moreno Date: Monday, January 12, 2015 at 9:59 PM To: Matt Glasser

Re: [HCP-Users] -cifti-separate

What is the required surface input for -cifti-find-clusters? Thanks, ___ Marta Moreno-Ortega, Ph.D. Postdoctoral Research Fellow Division of Experimental Therapeutics New York State Psychiatric Institute Department of Psychiatry Columbia University College of Physicians and Surgeons

Re: [HCP-Users] -cifti-separate

Is this HCP data or your own data? Matt. From: Marta Moreno Date: Monday, January 12, 2015 at 10:06 PM To: Matt Glasser Cc: "hcp-users@humanconnectome.org" Subject: Re: [HCP-Users] -cifti-separate Wha

Re: [HCP-Users] -cifti-separate

Is data created by the HCP pipeline. I made a t-map and saved it as a cifti file with 91K brain ordinates and I would like to cluster extent thresholding using the -cifti-fiind-clusters command but I am not sure what to use as the surface inputs files. Thanks, ___ Marta Moreno-Ortega

Re: [HCP-Users] -cifti-separate

Use ${StudyFolder}/${Subject}/MNINonLinear/fsaverage_LR32k/${Subject}.${Hemisphere}.midthickness.32k_fs_LR.surf.gii Peace, Matt. From: Marta Moreno Date: Monday, January 12, 2015 at 10:15 PM To: Matt Glasser Cc: "hcp-users@humanconnect

Re: [HCP-Users] -cifti-separate

Thank you I appreciate your help! All the best, ___ Marta Moreno-Ortega, Ph.D. Postdoctoral Research Fellow Division of Experimental Therapeutics New York State Psychiatric Institute Department of Psychiatry Columbia University College of Physicians and Surgeons On Jan 12, 2015, at