[BioRDF] about httpRange-14 (was RE: BioRDF: URI Best Practices)

2006-07-26 Thread John Barkley
In the context of the URI Best Practices discussion, I would be interested in hearing everyone's opinion on httpRange-14. Is this something acceptable as is? Should it be modified/extended for Life Sciences? Section 6 of: http://www.ibiblio.org/hhalpin/irw2006/hhalpin.pdf has a nice summary of t

Re: BioRDF: URI Best Practices

2006-07-24 Thread Alan Ruttenberg
On Jul 24, 2006, at 9:55 AM, Sean Martin wrote: Hi Alan, [EMAIL PROTECTED] wrote on 07/23/2006 11:51:35 PM: Are you suggesting that programs parse URIs to see if they contain the ASCII string "static"? If so, how would ones program know the difference from any of these links?[1] I can s

RE: BioRDF: URI Best Practices

2006-07-24 Thread Xiaoshu Wang
--Alan > XW> Should a LSID resolver decide not to resolve a > particular LSID, wouldn't it > XW> be the same effect as a broken link? > > Not really for a number of reasons. The first is that > you may well already have it stored somewhere accessible if > it has ev

Re: BioRDF: URI Best Practices

2006-07-24 Thread Sean Martin
blic/public-semweb-lifesci/2006Jul/0074.html Kindest regards, Sean Henry Story <[EMAIL PROTECTED]> Sent by: [EMAIL PROTECTED] 07/24/2006 06:45 AM To Sean Martin/Cambridge/[EMAIL PROTECTED] cc public-semweb-lifesci@w3.org Subject Re: BioRDF: URI Best Practices I too would

Re: BioRDF: URI Best Practices

2006-07-24 Thread Sean Martin
Hi Alan, [EMAIL PROTECTED] wrote on 07/23/2006 11:51:35 PM: > > On Jul 21, 2006, at 2:53 PM, Sean Martin wrote: > > > XW> Should a LSID resolver decide not to resolve a particular LSID, > > wouldn't it > > XW> be the same effect as a broken link?   > > > > Not really for a number of reasons.

Re: BioRDF: URI Best Practices

2006-07-24 Thread Sean Martin
> It seems to me that content negotiation is a pre-semantic web way of > handling a bit of semantics. Why not adopt a uniform way of handling > these things? You could certainly support content negotiation > discovered information by translating it to to the more expressive > rdf/owl. > I c

RE: BioRDF: URI Best Practices

2006-07-24 Thread Xiaoshu Wang
-- Alan > Also, mime types tell you the format of the resource, but > not the type of content. So compare a definition and a policy > statement metadata for a uri. Both might be text/rdf+xml, no? I am not sure what is your point here? What do you mean "compare a definition and a policy for a

RE: BioRDF: URI Best Practices

2006-07-24 Thread Xiaoshu Wang
-- Alan, > You are right in the sense that if I receive a naked URI in > the email I'll have to dereference it to learn something > about it. OTOH, this is not the case I am thinking about. I > am more concerned with URIs that I find in a SW context - > namely part of a graph - a packet of SW

Re: BioRDF: URI Best Practices

2006-07-24 Thread William Bug
Forgive me if I'm missing the point or just stating the obvious, but the "Generate OWLDoc" feature in Protégé - at least for Protégé-OWL files, works very nicely.  It's not the dynamically-generated view I'd really want ultimately, but it works great for a snapshot of an OWL-based ontology.For an e

Re: BioRDF: URI Best Practices

2006-07-24 Thread Henry Story
On 24 Jul 2006, at 13:16, [EMAIL PROTECTED] wrote: I too would be interested in understanding why people in the life sciences don't use URLs, because I think the advantage of using them is absolutely huge. Being able to "GET my meaning" [1] makes the Semantic web so easy to explain, so simple t

Re: Re: BioRDF: URI Best Practices

2006-07-24 Thread samwald
> I too would be interested in understanding why people in the life > sciences don't use URLs, because I think the advantage of using > them is absolutely huge. Being able to "GET my meaning" [1] makes > the Semantic web so easy to explain, so simple to read, so > beautiful all in all that one rea

Re: BioRDF: URI Best Practices

2006-07-24 Thread Henry Story
I too would be interested in understanding why people in the life sciences don't use URLs, because I think the advantage of using them is absolutely huge. Being able to "GET my meaning" [1] makes the Semantic web so easy to explain, so simple to read, so beautiful all in all that one real

Re: BioRDF: URI Best Practices

2006-07-23 Thread Alan Ruttenberg
On Jul 21, 2006, at 11:38 AM, Xiaoshu Wang wrote: notwithstanding, I'd rather know that I am dealing with a non-information resource *before* I touch the network. I am very puzzled, how can you tell a IR or non-IR given any URI, unless you have the knowledge about all URI before hand? Do

Re: BioRDF: URI Best Practices

2006-07-23 Thread Alan Ruttenberg
On Jul 21, 2006, at 10:59 AM, Chimezie Ogbuji wrote: As Xiaoshu pointed out, content negotiation (specific accept headers dispatched to a URL) give you *most* of this functionality purely at the transport level - assuming there are appropriate mime types for the representation you have in mi

Re: BioRDF: URI Best Practices

2006-07-23 Thread Alan Ruttenberg
On Jul 21, 2006, at 2:53 PM, Sean Martin wrote: XW> Should a LSID resolver decide not to resolve a particular LSID, wouldn't it XW> be the same effect as a broken link?   Not really for a number of reasons. The first is that you may well already have it stored somewhere accessible if it has ev

Re: [personal] RE: BioRDF: URI Best Practices

2006-07-21 Thread Mark Wilkinson
This URL vs. LSID discussion is reminding me of a poem that I think I will share with you all, since it is a gorgeous warm and sunny Friday afternoon here in Vancouver and I'm just in the mood to be cheeky ;-) Enjoy! Have a great weekend everyone! The Calf Path - One day, through

RE: BioRDF: URI Best Practices

2006-07-21 Thread Sean Martin
> SM> as names for things that have a digital existence. The issues > SM> of broken links is a difficult one because once the primary > SM> source at a particular location disappears you have nothing > SM> left to go on to find a copy of the thing named besides what > SM> you can find in the W

RE: BioRDF: URI Best Practices

2006-07-21 Thread Chimezie Ogbuji
On Fri, 21 Jul 2006, Xiaoshu Wang wrote: To discribe if an IR has multiple representations is different from to describe if it is IR or non-IR. Let's not mess this two up. The former is useful. For instance, if a data is available in XHTML, WML, word, PDF, etc. Then we can further use the

RE: BioRDF: URI Best Practices

2006-07-21 Thread Xiaoshu Wang
--Sean, > as names for things that have a digital existence. The issues > of broken links is a difficult one because once the primary > source at a particular location disappears you have nothing > left to go on to find a copy of the thing named besides what > you can find in the WayBack mach

RE: BioRDF: URI Best Practices

2006-07-21 Thread Xiaoshu Wang
--Alan, > notwithstanding, I'd rather know that I am dealing with a > non-information resource *before* I touch the network. I am very puzzled, how can you tell a IR or non-IR given any URI, unless you have the knowledge about all URI before hand? Don't you have to de-reference the URI at fir

RE: BioRDF: URI Best Practices

2006-07-21 Thread Miller, Michael D (Rosetta)
Title: Message Hi All,   (from Sean)   "The issues of broken links is a difficult one because once the primary source at a particular location disappears you have nothing left to go on to find a copy of the thing named besides what you can find in the WayBack machine or perhaps a Google ca

Re: BioRDF: URI Best Practices

2006-07-21 Thread Sean Martin
Hi Alan, > So my proposal suggests a class that defines ways of transforming the   > URI you find in a SW document into URLs that get specific types of   > information. The fact that a transform to URL is provided means you get   > the transport (because it is part of the transformed URL). Differ

Re: BioRDF: URI Best Practices

2006-07-21 Thread Chimezie Ogbuji
On Fri, 21 Jul 2006, Alan Ruttenberg wrote: Nice idea. I've added a similar proposal to the same wiki page[1]. Basically, I would argue that there are three aspects to dereferencing, with the problem being that there is no one thing that you always want dereferencing to get you. 1. T

Re: BioRDF: URI Best Practices

2006-07-21 Thread Alan Ruttenberg
Nice idea. I've added a similar proposal to the same wiki page[1]. Basically, I would argue that there are three aspects to dereferencing, with the problem being that there is no one thing that you always want dereferencing to get you. 1. The kind of information you want to get by derefe

Re: BioRDF: URI Best Practices

2006-07-21 Thread Danny Ayers
On 7/20/06, Matthias Samwald <[EMAIL PROTECTED]> wrote: On the page http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Tasks/URI_Best_Practices/Use_Cases I have written that an "ontology of resolvable resources" would be practical in some cases. I have created such a small ontology, it can be dow

RE: BioRDF: URI Best Practices

2006-07-20 Thread Xiaoshu Wang
Matthias, > The motivation for my proposal was that I think it is better > to know which URIs are supposed to be resolvable before we > are actually trying a HTTP GET or try to resolve something > with the LSID system. In large datasets we have plenty of > URIs -- if every agent would try to

RE: BioRDF: URI Best Practices

2006-07-20 Thread Matthias Samwald
On Thu, 20 Jul 2006 11:48:56 -0400, Xiaoshu Wang wrote: > What you said is not correct that "When RDF was invented it was > mostly intended to be used with URLs of the second group", Tim > Bernerds-Lee has long envisioned that URI is for everything. Agreed, however I have observed that the emphas

RE: BioRDF: URI Best Practices

2006-07-20 Thread Xiaoshu Wang
Matthias, > On the page > http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Tasks/URI_Best_ > Practices/Use_Cases > I have written that an "ontology of resolvable resources" > would be practical in some cases. If you read "the Architecture of World Wide Web http://www.w3.org/TR/webarch/";, you wou

Re: BioRDF: URI Best Practices

2006-07-20 Thread Matthias Samwald
On the page http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Tasks/URI_Best_Practices/Use_Cases I have written that an "ontology of resolvable resources" would be practical in some cases. I have created such a small ontology, it can be downloaded / imported from http://neuroscientific.net/ont/reso

Re: BioRDF: URI Best Practices

2006-07-20 Thread Sean Martin
hi Susie, Is there any chance that we can have a section that details the pro's and con's of URL's as URIs in a Life Sciences setting.  It is my understanding that the LSID URN was created in response to certain short comings of URLs  as names  - but may well not have over come them and so the var