iang University ; Jonathan Rees ; chris
mungall ; public-semweb-lifesci hcls ; Suzanna Lewis ; Judith Blake ; Barry
Smith ; John Barkley
Sent: Friday, April 20, 2007 11:47 AM
Subject: Re: adding pubmed ids to BAMS
On Apr 20, 2007, at 1:13 PM, Mark Montgomery wrote:
I can see t
a Lewis; Judith Blake; Barry Smith; John Barkley
> Subject: Re: adding pubmed ids to BAMS
>
>
> We met similar problems when we tried to relate publications
> to neurons.
>
> Check the research notes for CA3 pyramidal neuron:
> http://senselab.med.yale.edu/senselab/NeuronDB/
> From: Alan Ruttenberg
> . . .
> 2) I think that URIs should function first as unique identifiers, and
> only if possible, as elements of user interface. . . . .
I basically agree with this, but I think it is possible to strike
balance, since humans *do* still need to look at these URIs sometime
On Apr 20, 2007, at 1:13 PM, Mark Montgomery wrote:
I can see the potential for harm in attempting to zoom in too far
on granularity in standardization efforts (understanding the
appeal) and would therefore vote for prudent equilibrium between
adaptability and fixed. A bit messier perhaps t
; ; "Suzanna Lewis"
<[EMAIL PROTECTED]>; "Judith Blake" <[EMAIL PROTECTED]>; "Barry
Smith" <[EMAIL PROTECTED]>; "John Barkley" <[EMAIL PROTECTED]>
Sent: Friday, April 20, 2007 9:17 AM
Subject: Re: adding pubmed ids to BAMS
Yes, this is
Just as something else to think about - The web page you cite does,
kind of, name these classes, in that a table is give, with two labeled
axes. Each box is, in some way, realizes the class that I am
suggesting you create.
However, the nature of html make the display of this unobtrusive. I am
su
ch we will mean to say that the class
>> > (or some instances of the class) are discussed in the paper.
>> >
>> > ---
>> >
>> > Call me if you want to discuss this. Admittedly this may seem
>> > involved and odd, since it is a new idea, thoug
has "" or
> > cell_has_molecule_within some ( and (pubmedID has ""))
> >
> > where one of more of these is associated with a cell. I was under
the
> > impression that you were thinking about a general representation
> > that everyone
> > would
Pending your recomendation, I had tentatively suggested the
> > following for
> > representing this as:
> >
> > pubmedID has "" or
> > cell_has_molecule_within some ( and (pubmedID has ""))
> >
> > where one of more of these is associate
ai sent me?
>
> thanks,
>
> jb
>
>
>
> Date: Wed, 18 Apr 2007 12:30:17 -0400
> From: Alan Ruttenberg <[EMAIL PROTECTED]>
> To: John Barkley <[EMAIL PROTECTED]>
> Cc: Jonathan A Rees <[EMAIL PROTECTED]>
> Subject: Re: adding pubmed ids to BAMS
Rees <[EMAIL PROTECTED]>, chris mungall <[EMAIL PROTECTED]>,
public-
semweb-lifesci hcls , Suzanna Lewis
<[EMAIL PROTECTED]>, Judith Blake <[EMAIL PROTECTED]>, Barry Smith
<[EMAIL PROTECTED]>
Subject: Re: adding pubmed ids to BAMS
Quoting Alan Ruttenberg <[EMA
uot; <[EMAIL PROTECTED]>
Cc: "Jonathan Rees" <[EMAIL PROTECTED]>; "chris mungall"
<[EMAIL PROTECTED]>; "public-semweb-lifesci hcls" [EMAIL PROTECTED]>; "Suzanna Lewis" <[EMAIL PROTECTED]>; "Judith
Blake" <[EMAIL PROTE
ll" <[EMAIL PROTECTED]>;
"public-semweb-lifesci hcls" ; "Suzanna Lewis"
<[EMAIL PROTECTED]>; "Judith Blake" <[EMAIL PROTECTED]>; "Barry
Smith" <[EMAIL PROTECTED]>
Sent: Thursday, April 19, 2007 11:46 AM
Subject: Re: adding pubmed ids
" [EMAIL PROTECTED]>; "Suzanna Lewis" <[EMAIL PROTECTED]>; "Judith
Blake" <[EMAIL PROTECTED]>; "Barry Smith"
<[EMAIL PROTECTED]>
Sent: Thursday, April 19, 2007 12:24 AM
Subject: Re: adding pubmed ids to BAMS
Here is an idea I am e
quot;John Barkley" <[EMAIL PROTECTED]>
Cc: "Jonathan Rees" <[EMAIL PROTECTED]>; "chris mungall" <[EMAIL PROTECTED]>;
"public-semweb-lifesci hcls" ; "Suzanna Lewis"
<[EMAIL PROTECTED]>; "Judith Blake" <[EMAIL PROTE
Date: Wed, 18 Apr 2007 12:30:17 -0400
From: Alan Ruttenberg <[EMAIL PROTECTED]>
To: John Barkley <[EMAIL PROTECTED]>
Cc: Jonathan A Rees <[EMAIL PROTECTED]>
Subject: Re: adding pubmed ids to BAMS
Quoting Alan Ruttenberg <[EMAIL PROTECTED]>:
On Apr 13, 2007, at 1:5
sent me?
thanks,
jb
Date: Wed, 18 Apr 2007 12:30:17 -0400
From: Alan Ruttenberg <[EMAIL PROTECTED]>
To: John Barkley <[EMAIL PROTECTED]>
Cc: Jonathan A Rees <[EMAIL PROTECTED]>
Subject: Re: adding pubmed ids to BAMS
Quoting Alan Ruttenberg <[EMAIL PROTECTED]>
17 matches
Mail list logo
