[PyMOL] Slab on external screen with open source PyMOL

2022-11-08 Thread Marko Hyvonen
indow back to laptop screen, but no action on the second screen. Shift-Right-Mouse for front/back clip works, as does command line eg. "clip slab, 10". Just not scroll wheel slab. Anyone had the same and been able to fix it or suggestions on what to try? Cheers, Marko ----- Marko H

Re: [PyMOL] hiding the main chain for a named selection?

2022-11-02 Thread Marko Hyvonen
Hi Colin, >From memory (and assuming no hydrogens) hide everything, name C+N+O & yourselection Marko ----- Marko Hyvonen Department of Biochemistry University of Cambridge mh...@cam.ac.uk https://hyvonen.bioc.cam.ac.uk @HyvonenGroup From: Colin Dolp

Re: [PyMOL] Scroll wheel not slabbing

2021-05-02 Thread Marko Hyvonen
   File "C:\Python39\lib\site-packages\Pmw\Pmw_2_0_1\lib\PmwColor.py", line 359, in bordercolors '#%04x%04x%04x' % (lightRGB[0], lightRGB[1], lightRGB[2]), TypeError: %x format: an integer

[PyMOL] Scroll wheel not slabbing

2021-05-02 Thread Marko Hyvonen
round'])   File "C:\Python39\lib\site-packages\Pmw\Pmw_2_0_1\lib\PmwColor.py", line 359, in bordercolors     '#%04x%04x%04x' % (lightRGB[0], lightRGB[1], lightRGB[2]), TypeError: %x format: an integer is required, not float -- Marko

Re: [PyMOL] Selection of elements in object

2020-03-20 Thread Marko Hyvonen
rs@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe -- Marko Hyvonen Department of Biochemistry, University of Cambridge mh...@cam.ac.uk +44 (0)1223 766 044 @HyvonenGroup http:

Re: [PyMOL] How to manually define the lower and upper limit of vacuum electrostatics?

2019-09-12 Thread Marko Hyvonen
regards. Yeping ___ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe -- Marko Hyvonen Departm

Re: [PyMOL] Please unsubscribe me

2018-10-16 Thread Marko Hyvonen
@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe -- Marko Hyvonen Department of Biochemistry

Re: [PyMOL] Calculate RMSD between ligands from a crystal structure and from a docking

2018-07-26 Thread Marko Hyvonen
@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Department of Biochemistry, University of Cambridge

Re: [PyMOL] Calculate RMSD between ligands from a crystal structure and from a docking

2018-07-26 Thread Marko Hyvonen
_ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Department of Biochemistry, Un

Re: [PyMOL] Unsubscribe pymol user mails

2018-07-24 Thread Marko Hyvonen
.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Department of Biochemistry, University of Cambridge mh...@cam.ac.uk +44 (0)1223 766 044 @HyvonenGrou

Re: [PyMOL] Color backbone amide nitrogen

2018-07-23 Thread Marko Hyvonen
shdot ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Marko Hyvonen Departme

[PyMOL] Fwd: Re: Viewer Window Clipped at Border

2017-11-08 Thread Marko Hyvonen
+ From: Marko Hyvonen To: Nicholas Fitzkee Sounds like the same problem I had recently (Nvidia graphics not used for PyMOL, but the built in

[PyMOL] Outline width for ray tracing

2017-05-25 Thread Marko Hyvonen
is. Is is possible to define this, and if so, how? many thanks in advance, Marko -- Marko Hyvonen Department of Biochemistry, University of Cambridge mh...@cam.ac.uk +44-(0)1223-766 044 @HyvonenGroup http://www-cryst.bioc.cam.ac.uk/groups/hyvonen

Re: [PyMOL] Shell utilities for structural bioinformatics

2014-09-12 Thread Marko Hyvonen
_____ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net > <mailto:PyMOL-users@lists.sourceforge.net>) > Info Page: > https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: >