Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-15 Thread Андрей Гончар
Hi all! I've just installed a new version of PyMol, but when I select a repersentation different to the default, it displays a blank screen and returns unsupported IR in fragment shader 13 unsupported IR in fragment shader 13 unsupported IR in fragment shader 13 unsupported IR in fragment shader

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-15 Thread Troels Emtekær Linnet
Hi. I can confirm that you can compile pymol 1.5.0.1 on RHEL 6, with python 2.6.6 from the RHEL repositories. http://www.pymolwiki.org/index.php/Linux_Install#Red_Hat_Enterprise_Linux_RHEL_6_compile_and_install_with_MPEG_support_for_x86_64_bit Still splash screen 1.3.x ... Funny bug. Best

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-15 Thread Jason Vertrees
Hi, This also sounds like a graphics driver issue or issue with MESA (http://www.mesa3d.org/). Please ensure both are updated to their latest versions. Cheers, -- Jason On Wed, Feb 15, 2012 at 5:30 AM, Андрей Гончар gontc...@gmail.com wrote: Hi all! I've just installed a new version of

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-15 Thread Tim Travers
Hi all, I was wondering if the issue below on compiling molfile support has a fix? It looks like the include file was updated but not the C source. Thanks, Tim I cannot compile the molfile support: x86_64-pc-linux-gnu-gcc -pthread -Ofast -pipe -ftracer -march=corei7-avx -mtune=corei7-avx

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-15 Thread zjxu
Dear, I compiled PyMOL 1.5.0.1 from SVN revision 3979 on Centos 5 with python 2.7.1. and found splash screen 1.3.x too. Best, Zhijian Xu Troels Emtekær Linnet wrote: Hi. I can confirm that you can compile pymol 1.5.0.1 on RHEL 6, with python 2.6.6 from the RHEL repositories.

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-14 Thread Justin Lecher
Hi Jason, I found a bug. If you set Display - Quality - Maximum Quality turns the display around. That means the back is in the front and small, and the front, larger parts are in the back. justin -- Justin Lecher Institute of Complex Systems ICS-6 Structural Biochemistry Research Centre

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-14 Thread Justin Lecher
On 14/02/12 09:29, Lecher, Justin wrote: Hi Jason, I found a bug. If you set Display - Quality - Maximum Quality turns the display around. That means the back is in the front and small, and the front, larger parts are in the back. justin To be more precise, it seems that this only

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-14 Thread fukamitka
@lists.sourceforge.net Subject: Re: [PyMOL] Open Source PyMOL v1.5.0.1 On 14/02/12 09:29, Lecher, Justin wrote: Hi Jason, I found a bug. If you set Display - Quality - Maximum Quality turns the display around. That means the back is in the front and small, and the front, larger parts

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-14 Thread Tru Huynh
On Mon, Feb 13, 2012 at 02:27:54PM -0500, Jason Vertrees wrote: Greetings, ... I could make it build with python 2.6.6/2.7.2 but not with the default CentOS-5 python-2.4 version :( [tru@sillage pymol-1.5.0.1_3978]$ python setup.py install --prefix=/tmp/py24-pymol Traceback (most recent call

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-14 Thread David Hall
On Mon, Feb 13, 2012 at 2:27 PM, Jason Vertrees jason.vertr...@schrodinger.com wrote: Greetings, It is my pleasure to announce the release of open source PyMOL v1.5.0.1. The source code has been committed to the open-source repository. It is revision 3976. An svn tag and downloadable bz2

[PyMOL] Open Source PyMOL v1.5.0.1

2012-02-13 Thread Jason Vertrees
Greetings, It is my pleasure to announce the release of open source PyMOL v1.5.0.1. The source code has been committed to the open-source repository. It is revision 3976. An svn tag and downloadable bz2 source file were also created. All of this is accessible form the PyMOL project page on

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-13 Thread Jason Vertrees
Hi Christoph, I just noticed that myself. I'll add the requisite files now. Cheers, -- Jason On Mon, Feb 13, 2012 at 3:47 PM, Christoph Gohlke cgoh...@uci.edu wrote: On 2/13/2012 11:27 AM, Jason Vertrees wrote: Greetings, It is my pleasure to announce the release of open source PyMOL

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-13 Thread Jason Vertrees
Christoph et. al, The changes have been pushed. Please let me know if you run into any other problems. Cheers, -- Jason On Mon, Feb 13, 2012 at 3:50 PM, Jason Vertrees jason.vertr...@schrodinger.com wrote: Hi Christoph, I just noticed that myself. I'll add the requisite files now. Cheers,

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-13 Thread Christoph Gohlke
Hi Jason, Thank you. Works well now. The speed improvements are very significant (Win64, GeForce GTX 560). Btw, the splash screens are still at version 1.3.x. Christoph On 2/13/2012 12:50 PM, Jason Vertrees wrote: Hi Christoph, I just noticed that myself. I'll add the requisite files now.

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-13 Thread Justin Lecher
On 13.02.2012 20:27, Jason Vertrees wrote: Greetings, It is my pleasure to announce the release of open source PyMOL v1.5.0.1. The source code has been committed to the open-source repository. It is revision 3976. An svn tag and downloadable bz2 source file were also created. All of this is

Re: [PyMOL] Open Source PyMOL v1.5.0.1

2012-02-13 Thread Troels Emtekær Linnet
Thanks! It worked. :-) Troels Emtekær Linnet 2012/2/13 Justin Lecher j.lec...@fz-juelich.de On 13.02.2012 20:27, Jason Vertrees wrote: Greetings, It is my pleasure to announce the release of open source PyMOL v1.5.0.1. The source code has been committed to the open-source