Hi all,
using the -provenance option of the command line I can see the "progress
report" o the workbench afterwards. Thanks!
The "progress report" is very important for long lasting workflows and it
helps detect bottlenecks (slow components inside the workflow). I like that
it can be easily copied from the workbench with CTRL+C and pasted into a
text file, xls, etc. and I like it's not a complex xml. That could be
interesting for automatic processing however I would always want the simple
table.
The problem is that progress report cannot be retrieved when running the
command line product, which is in fact the most interesting solution for
long lasting executions. In that case I would put the command line tool on
a server to run heavy workflows if I could get the progress report easily
(not database solution). I know that the Taverna server could fix this
issue and I hope its next release will be more usable than the previous one.
Another nice improvement for the command line would be to get some feedback
to the user about what is going on... simply to know that the program is
not hung. Some iteration number would be great (like the workbench output
iterations by default).
Regards!
Marc
2011/12/16 Guzmán Llambías - INCO <[email protected]>
> **
> Hi Stian!
>
> the report tab of the Taverna Workbench is very usefull graphic tool to
> see the provenance info (intermediate values, global output values,
> response time, etc) although I cannot see those values after running the
> workflows using the command line tool. If you can improve Taverna to see
> the results of the commandline, I would be very gratefull!!
>
> >> We are improving the Provenance capture and export for Taverna 3
> do you know when is going to be Taverna 3 released?
>
> >> Out of interest, the reports you want for the cron-workflows, are the
> for human or computer consumption?
> My first interest is human consumption, although it could be interesting
> to have in the future input for computer consumption
>
>
> ----- Original Message -----
>
> *From:* Stian Soiland-Reyes <[email protected]>
> *To:* [email protected]
> *Sent:* Thursday, December 15, 2011 10:53 AM
> *Subject:* Re: [Taverna-users] schedule my experiment
>
> Sorry, as you have found out, the command line tool does not yet export
> the run summary table, but those runs should appear in next run of Taverna
> Workbench
>
> (as long as you are running the executeworkflow bundled with the workbench
> instead of the commandline product)
>
> You can export provenance traces as Janus and OPM rdf, but they don't
> contain the tabular summary, (although that should be possible to derive
> from the exported data.)
>
> We are improving the Provenance capture and export for Taverna 3. If there
> are particular pieces of information you feel are important to include in
> such a report, please let us know and we will have look.
>
> Out of interest, the reports you want for the cron-workflows, are the for
> human or computer consumption? We could consider an HTML or CSV
> representation approaching what is now in Run perspective.
> On Nov 4, 2011 12:37 PM, "Guzmán Llambías - INCO" <[email protected]>
> wrote:
>
>> after running some examples I couldn't find the info of the Progress
>> report
>> tab of the workbench anywhere using the command line tool. Could you
>> please
>> tell me where can I find it?
>>
>> I would be very thankfull!
>>
>> Regards!
>> Guzmán
>>
>>
>>
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--
Marc Poch Riera
*UNIVERSITAT POMPEU FABRA – BARCELONA*
*IULA* Institut Universitari de Lingüística Aplicada
Roc Boronat 138, 08018 Barcelona
Tel. +34935422307
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