Hi Andy:
Thanks for the quick response. I tried CONSTRUCT and it did work out. But
how can I reformat such a query to CONSTRUCT one:
SELECT DISTINCT *
{
?ddi ddids:has_association ?c .
?ddi ddids:has_association ?c2 .
?c ddids:chemical_or_drug_affects_gene_product ?omim .
?omim ddids:gene_product_encoded_by_gene ?g .
?g ddids:gene_plays_role_in_process ?w .
?g ddids:gene_plays_role_in_process ?bp .
?bp ddids:process_involves_gene ?g2 .
?g2 ddids:gene_plays_role_in_process ?bp2 .
where I need each variable ( for example ?w, ?bp , etc) to be a new
resources.
Thanks
On Sat, Nov 2, 2013 at 6:41 AM, Andy Seaborne <a...@apache.org> wrote:
> You need to use a CONSTRUCT query, not a SELECT one.
>
> outputAsRDF encodes the result set (i.e. the table) as RDF - it is not the
> datamodel of the original data.
>
> CONSTRUCT allows you to create one RDF graph from data from another.
>
> See also SPARQL Update for doign that from one graph to another in the
> same database.
>
> Andy
>
>
> On 02/11/13 05:35, Adeeb Noor wrote:
>
>> Hi guys:
>>
>> I would like to save my SPARQL result coming from ResultSet into new rdf.
>> (new rdf resources) cause I want to do more work on this subgraph and it
>> has to be in the original rdf format.
>>
>> I tried outputAsRDF function and it worked however the result I got the
>> following:
>>
>> <rdf:Description rdf:nodeID="A5">
>> <rs:value rdf:resource="
>> https://csel.cs.colorado.edu/~noor/Drug_Disease_ontology/
>> DDID.owl#genotypePhenotype
>> "/>
>> <rs:variable>omimt</rs:variable>
>> </rdf:Description>
>> <rdf:Description rdf:nodeID="A6">
>> <rs:value rdf:resource="
>> https://csel.cs.colorado.edu/~noor/Drug_Disease_ontology/
>> DDID.rdf#C0007589
>> "/>
>> <rs:variable>w</rs:variable>
>> </rdf:Description>
>> <rdf:Description rdf:nodeID="A7">
>> <rs:binding rdf:nodeID="A8"/>
>> <rs:binding rdf:nodeID="A9"/>
>> <rs:binding rdf:nodeID="A10"/>
>> <rs:binding rdf:nodeID="A11"/>
>> <rs:binding rdf:nodeID="A12"/>
>> <rs:binding rdf:nodeID="A13"/>
>> <rs:binding rdf:nodeID="A14"/>
>> <rs:binding rdf:nodeID="A15"/>
>> <rs:binding rdf:nodeID="A16"/>
>> <rs:binding rdf:nodeID="A17"/>
>> <rs:binding rdf:nodeID="A18"/>
>> <rs:binding rdf:nodeID="A19"/>
>> <rs:binding rdf:nodeID="A20"/>
>> <rs:binding rdf:nodeID="A21"/>
>> <rs:binding rdf:nodeID="A22"/>
>> <rs:binding rdf:nodeID="A23"/>
>> <rs:binding rdf:nodeID="A24"/>
>> <rs:binding rdf:nodeID="A25"/>
>> <rs:binding rdf:nodeID="A26"/>
>> <rs:binding rdf:nodeID="A27"/>
>> </rdf:Description>
>>
>> how I can remove this nodes things and make it something like:
>>
>> <rdf:Description rdf:about="
>> https://csel.cs.colorado.edu/~noor/Drug_Disease_ontology/
>> DDID.rdf#C3229174">
>> <j.0:label>Cytra-K Oral Product</j.0:label>
>> <rdf:type rdf:resource="
>> https://csel.cs.colorado.edu/~noor/Drug_Disease_ontology/
>> DDID.owl#chemical
>> "/>
>> </rdf:Description>
>>
>> please help me out
>>
>>
>
--
Adeeb Noor
Ph.D. Candidate
Dept of Computer Science
University of Colorado at Boulder
Cell: 571-484-3303
Email: adeeb.n...@colorado.edu
