I've pushed a fix to https://github.com/sagemath/sage/pull/36276
On Sunday, September 17, 2023 at 5:02:05 PM UTC-7 Matthias Köppe wrote: > Yes, it's a bug in the build system. Running CONFIG_SHELL="bash -x" > ./configure.... > > + printf '%s\n' 'configure:49868: result: no; skipping check' > + printf '%s\n' 'no; skipping check' > + sage_spkg_install_meson-python=yes > ./configure: line 49870: sage_spkg_install_meson-python=yes: command not > found > + test yes = yes > + : > + sage_use_system_meson-python=no > ./configure: line 49874: sage_use_system_meson-python=no: command not found > + test xno = xno > + : > + sage_use_system_meson_python=yes > + printf '%s\n' 'configure:49884: will use system package and not install > SPKG meson_python' > + printf '%s\n' 'configure: will use system package and not install SPKG > meson_python' > + > > On Sunday, September 17, 2023 at 1:34:35 PM UTC-7 Dima Pasechnik wrote: > >> >> >> On Sun, Sep 17, 2023 at 7:25 PM John H Palmieri <jhpalm...@gmail.com> >> wrote: >> > >> > Similar problem for me on OS X. I don't understand something: the >> dependencies for scipy include meson_python, but that package is not >> installed before scipy attempts to build, and fails. Running "make >> meson_python" and then "make scipy" succeeds, as does "make". >> >> $ cat build/pkgs/scipy/dependencies >> $(BLAS) gfortran numpy pybind11 cython pythran | $(PYTHON_TOOLCHAIN) >> meson_python $(PYTHON) >> >> looks OK. So this looks like a bug in our build system >> >> >> > >> > >> > >> > On Saturday, September 16, 2023 at 2:59:58 PM UTC-7 Kwankyu Lee wrote: >> >> >> >> Succeeded after sage -pip install meson-python. >> >> >> >> On Sunday, September 17, 2023 at 6:52:59 AM UTC+9 Kwankyu Lee wrote: >> >>> >> >>> Incremental build failed >> >>> >> >>> [scipy-1.11.2] >> [......................................................................] >> >>> [scipy-1.11.2] scipy-1.11.2 >> >>> [scipy-1.11.2] ==================================================== >> >>> [sagelib-10.2.beta3] Removing file or directory >> /Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/sagemath-standard.egg-link >> >>> [sagelib-10.2.beta3] Removing pth entries from >> /Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/easy-install.pth: >> >>> [sagelib-10.2.beta3] Removing entry: >> /Users/kwankyu/GitHub/sage-dev/src >> >>> [sagelib-10.2.beta3] Successfully uninstalled >> sagemath-standard-10.2b3 >> >>> [sagelib-10.2.beta3] Running setup.py develop for sagemath-standard >> >>> [sagelib-10.2.beta3] Running command python setup.py develop >> >>> [scipy-1.11.2] Setting up build directory for scipy-1.11.2 >> >>> [scipy-1.11.2] Finished extraction >> >>> [scipy-1.11.2] Applying patches from ../patches... >> >>> [scipy-1.11.2] Applying ../patches/numpy-include.patch >> >>> [scipy-1.11.2] patching file scipy/spatial/setup.py >> >>> [scipy-1.11.2] Hunk #1 succeeded at 39 (offset -1 lines). >> >>> [scipy-1.11.2] Applying ../patches/tests_no_internet_dependency.patch >> >>> [scipy-1.11.2] patching file scipy/datasets/meson.build >> >>> [scipy-1.11.2] **************************************************** >> >>> [scipy-1.11.2] Host system: >> >>> [scipy-1.11.2] Darwin Helios.local 22.6.0 Darwin Kernel Version >> 22.6.0: Wed Jul 5 22:21:56 PDT 2023; root:xnu-8796.141.3~6/RELEASE_X86_64 >> x86_64 >> >>> [scipy-1.11.2] **************************************************** >> >>> [scipy-1.11.2] C compiler: gcc >> >>> [scipy-1.11.2] C compiler version: >> >>> [scipy-1.11.2] Apple clang version 14.0.3 (clang-1403.0.22.14.1) >> >>> [scipy-1.11.2] Target: x86_64-apple-darwin22.6.0 >> >>> [scipy-1.11.2] Thread model: posix >> >>> [scipy-1.11.2] InstalledDir: >> /Library/Developer/CommandLineTools/usr/bin >> >>> [scipy-1.11.2] **************************************************** >> >>> [scipy-1.11.2] Package 'scipy' is currently not installed >> >>> [scipy-1.11.2] No legacy uninstaller found for 'scipy'; nothing to do >> >>> [scipy-1.11.2] Installing scipy-1.11.2 >> >>> [scipy-1.11.2] DEPRECATION: --no-binary currently disables reading >> from the cache of locally built wheels. In the future --no-binary will not >> influence the wheel cache. pip 23.1 will enforce this behaviour change. A >> possible replacement is to use the --no-cache-dir option. You can use the >> flag --use-feature=no-binary-enable-wheel-cache to test the upcoming >> behaviour. Discussion can be found at >> https://github.com/pypa/pip/issues/11453 >> >>> [scipy-1.11.2] Processing >> /Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/var/tmp/sage/build/scipy-1.11.2/src >> >>> [scipy-1.11.2] Preparing metadata (pyproject.toml): started >> >>> [scipy-1.11.2] Running command Preparing metadata (pyproject.toml) >> >>> [scipy-1.11.2] Preparing metadata (pyproject.toml): finished with >> status 'done' >> >>> [scipy-1.11.2] ERROR: Exception: >> >>> [scipy-1.11.2] Traceback (most recent call last): >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/cli/base_command.py", >> >> line 160, in exc_logging_wrapper >> >>> [scipy-1.11.2] status = run_func(*args) >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/cli/req_command.py", >> >> line 247, in wrapper >> >>> [scipy-1.11.2] return func(self, options, args) >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/commands/wheel.py", >> >> line 170, in run >> >>> [scipy-1.11.2] requirement_set = resolver.resolve(reqs, >> check_supported_wheels=True) >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/resolver.py", >> >> line 73, in resolve >> >>> [scipy-1.11.2] collected = >> self.factory.collect_root_requirements(root_reqs) >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py", >> >> line 491, in collect_root_requirements >> >>> [scipy-1.11.2] req = self._make_requirement_from_install_req( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py", >> >> line 453, in _make_requirement_from_install_req >> >>> [scipy-1.11.2] cand = self._make_candidate_from_link( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py", >> >> line 206, in _make_candidate_from_link >> >>> [scipy-1.11.2] self._link_candidate_cache[link] = LinkCandidate( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", >> >> line 297, in __init__ >> >>> [scipy-1.11.2] super().__init__( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", >> >> line 162, in __init__ >> >>> [scipy-1.11.2] self.dist = self._prepare() >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", >> >> line 231, in _prepare >> >>> [scipy-1.11.2] dist = self._prepare_distribution() >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", >> >> line 308, in _prepare_distribution >> >>> [scipy-1.11.2] return >> preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/prepare.py", >> >> line 491, in prepare_linked_requirement >> >>> [scipy-1.11.2] return self._prepare_linked_requirement(req, >> parallel_builds) >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/prepare.py", >> >> line 577, in _prepare_linked_requirement >> >>> [scipy-1.11.2] dist = _get_prepared_distribution( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/prepare.py", >> >> line 69, in _get_prepared_distribution >> >>> [scipy-1.11.2] abstract_dist.prepare_distribution_metadata( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/distributions/sdist.py", >> >> line 61, in prepare_distribution_metadata >> >>> [scipy-1.11.2] self.req.prepare_metadata() >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/req/req_install.py", >> >> line 535, in prepare_metadata >> >>> [scipy-1.11.2] self.metadata_directory = generate_metadata( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/build/metadata.py", >> >> line 35, in generate_metadata >> >>> [scipy-1.11.2] distinfo_dir = >> backend.prepare_metadata_for_build_wheel(metadata_dir) >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/utils/misc.py", >> >> line 706, in prepare_metadata_for_build_wheel >> >>> [scipy-1.11.2] return super().prepare_metadata_for_build_wheel( >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_vendor/pep517/wrappers.py", >> >> line 189, in prepare_metadata_for_build_wheel >> >>> [scipy-1.11.2] return >> self._call_hook('prepare_metadata_for_build_wheel', { >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_vendor/pep517/wrappers.py", >> >> line 319, in _call_hook >> >>> [scipy-1.11.2] raise BackendUnavailable(data.get('traceback', '')) >> >>> [scipy-1.11.2] pip._vendor.pep517.wrappers.BackendUnavailable: >> Traceback (most recent call last): >> >>> [scipy-1.11.2] File >> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_vendor/pep517/in_process/_in_process.py", >> >> line 77, in _build_backend >> >>> [scipy-1.11.2] obj = import_module(mod_path) >> >>> [scipy-1.11.2] File >> "/usr/local/Cellar/pyt...@3.10/3.10.9/Frameworks/Python.framework/Versions/3.10/lib/python3.10/importlib/__init__.py", >> >> line 126, in import_module >> >>> [scipy-1.11.2] return _bootstrap._gcd_import(name[level:], >> package, level) >> >>> [scipy-1.11.2] File "<frozen importlib._bootstrap>", line 1050, in >> _gcd_import >> >>> [scipy-1.11.2] File "<frozen importlib._bootstrap>", line 1027, in >> _find_and_load >> >>> [scipy-1.11.2] File "<frozen importlib._bootstrap>", line 1004, in >> _find_and_load_unlocked >> >>> [scipy-1.11.2] ModuleNotFoundError: No module named 'mesonpy' >> >>> [scipy-1.11.2] >> >>> [scipy-1.11.2] >> ******************************************************************************** >> >>> [scipy-1.11.2] Error building a wheel for scipy-1.11.2 >> >>> [scipy-1.11.2] >> ******************************************************************************** >> >>> [scipy-1.11.2] >> >>> [scipy-1.11.2] real 0m0.924s >> >>> [scipy-1.11.2] user 0m0.663s >> >>> [scipy-1.11.2] sys 0m0.184s >> >>> [scipy-1.11.2] >> ************************************************************************ >> >>> [scipy-1.11.2] Error installing package scipy-1.11.2 >> >>> >> >>> On Sunday, September 17, 2023 at 12:31:53 AM UTC+9 Volker Braun wrote: >> >>>> >> >>>> As always, you can get the latest beta version from the "develop" >> git branch. Alternatively, the self-contained source tarball is at >> http://www.sagemath.org/download-latest.html >> >>>> >> >>>> >> >>>> 80f6d772a15 (tag: 10.2.beta3, github/develop) Updated SageMath >> version to 10.2.beta3 >> >>>> f32860b2015 gh-36263: Fix setuptools version bounds in generated >> `pyproject.toml` files >> >>>> c95bd1440b4 gh-36260: `MPowerSeries`: Don't go through symbolics to >> compute exp(0), log(1) >> >>>> cac16e2fa5d gh-36256: Support more system-site packages >> >>>> 238b1dc6eef gh-36255: numpy-1.25 compatibility >> >>>> 486d3b99e87 gh-36250: various details in sets/disjoint_set >> >>>> 357b34b55f7 gh-36249: E228 and E225 in groups,interfaces,modules,plot >> >>>> adc3df9e5c0 gh-36248: some care for unused variables in matrix/ >> >>>> 413b5d679c5 gh-36247: fix E228 and E225 in categories/ >> >>>> 96d249a37d9 gh-36243: ⬆️ Bump actions/checkout from 3 to 4 >> >>>> 4bb48bddfa4 gh-36241: ⬆️ Bump myrotvorets/set-commit-status-action >> from 1.1.7 to 2.0.0 >> >>>> 191d1f97ba6 gh-36240: Fix Python package metadata generated by >> `bootstrap` >> >>>> 905d3c2d486 gh-36238: `sage -t`: Distinguish .pxd from .pyx in >> doctest basenames >> >>>> b6b50a80e96 gh-36235: support for ecl 23.9.9 >> >>>> 683b05bb5a2 gh-36232: Make `min_spanning_tree` robust to >> incomparable vertex labels >> >>>> 8d09d156fcf gh-36231: fix typo in documentation >> >>>> 33182d9feaa gh-36225: improve the use of graphs in >> `sage/combinat/posets/*` >> >>>> 33d6cc5a001 gh-36224: Add cycle_type() and fix to_cycle() to >> SignedPermutation. >> >>>> 3e6db2405df gh-36221: get rid of xrange again >> >>>> 029450c8712 gh-36219: configure.ac: disable webencodings,tinycss2 >> with --disable-notebook >> >>>> 3ea961767e8 gh-36218: src/bin/sage-env: set >> PYDEVD_DISABLE_FILE_VALIDATION=1 >> >>>> f95e442cb4b gh-36213: Fix sync labels issues for step 2 going live >> >>>> e74579d32b9 gh-36212: singular: added missing #endif >> >>>> 322ad22e8c8 gh-36210: configure.ac: disable mathjax with >> --disable-doc >> >>>> 6fe3561bbbb gh-36209: build/pkgs/ipython/dependencies: drop jinja2 >> >>>> 78efe5546db gh-36206: Remove some obsolete "six" dependencies >> >>>> 1a1df6f6fbe gh-36186: Drop obsolete html5lib package >> >>>> 5b2f125a842 gh-36176: build/pkgs/tox: Update, require tox >= 4.2.7, >> update dependencies >> >>>> 9dd8a772e53 gh-36168: `sage.groups`: Modularization fixes, `# >> needs`, doctest cosmetics >> >>>> 4f4fbc29184 gh-36165: Fix reduction of cusps for Gamma(N) >> >>>> 45537351d7e gh-36122: Added hash function to elements of the >> fundamental group of an extended affine Weyl group >> >>>> 5b9137c7204 gh-35970: src/sage/combinat/affine_permutation.py: Fix >> docstring markup >> >>>> bbe57a4d34d gh-35964: Matroids: Don't forget to check rank in >> `equals`, `is_isomorphism` >> >>>> 23b1a0af6f0 gh-35875: Implementing moment angle complexes >> >>>> 3a3126ffc0e gh-35767: add .basis_matrix() wrapper to quaternion >> orders >> >>>> d412568dff7 gh-35485: New comparison mode to lazy series and better >> undefined check >> >>>> 21a624a7b45 gh-35362: Implement infinite sums and products for lazy >> series >> >>>> 8c040276465 gh-35038: Implement Milnor fiber and Coxeter complexes >> >>>> 41031292ff1 (tag: 10.2.beta2) Updated SageMath version to 10.2.beta2 >> > >> > -- >> > You received this message because you are subscribed to the Google >> Groups "sage-release" group. >> > To unsubscribe from this group and stop receiving emails from it, send >> an email to sage-release...@googlegroups.com. >> > To view this discussion on the web visit >> https://groups.google.com/d/msgid/sage-release/b55a4f66-7548-47ea-b88b-95f2fb5fbf02n%40googlegroups.com >> . >> > -- You received this message because you are subscribed to the Google Groups "sage-release" group. 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