Dear John and FIS colleagues,

It was nice hearing your response. For technical reasons of the server, _attachments are unwelcome_ (and often directly rejected). Send please a web address where interested people can download your document. Also, it is better if you send directly your response to FIS list (_*fis@listas.unizar.es*_). About your content, I see a couple of problems introducing "consciousness" at the cellular/molecular level. For this term has a very definite meaning in the /ad hoc/ research that is taken place during last decades. Conflating it with basic cellular processes may not be necessary, given that other terms (more realistic ones?) are available. For instance, I referred to self-referential cognition. In any case, I agree that classical autopoiesis falls too short of what is needed... Besides, about the cosmological relationship with fundamental physics, is it a convenient step? Does it introduce a premature closure in the bio-informational thinking process?

Best--Pedro

El 22/01/2018 a las 16:02, JOHN TORDAY escribió:
Dear FISers, I greatly appreciate Pedro's comments regarding my New Year Lecture. I fully agree with his comment " That life's physiology is based on the conjunction of a few principles: neguentropy, chemiosmosis, and homeostasis-homeorhesis" applies to non-living states too. I did not intend to make that statement exclusive, and if it sounded like that Pedro's clarification is important. In fact have just published a paper entitled "Quantum Mechanics Predicts Evolutionary Biology" which is predicated on the hypothesis that self-referential self-organization is the result of the Singularity/Big Bang, Newton's Third Law of Thermodynamics that every action has an equal and opposite reaction. That idea would apply to both evolutionary biology and to balanced chemical reactions alike. As for the question of the emergence of self-referential consciousness 'right at the beginning', I am in favor of that concept, as I have expressed it in a recent paper, entitled "From Cholesterol to Consciousness" (see attached) so I look forward to reading your comments about that idea as well, since it has the potential to fully integrate physics and biology in my humble opinion.

On Mon, Jan 22, 2018 at 4:01 AM, Pedro C. Marijuan <pcmarijuan.i...@aragon.es <mailto:pcmarijuan.i...@aragon.es>> wrote:

    Dear FISers,

    Going to the extreme, I think this year opening lecture can be
    summarized in three contentious points.

    1. That life's physiology is based on the conjunction of a few
    principles: neguentropy, chemiosmosis, and homeostasis-homeorhesis.

    2. That communication (cell signaling) is an essential factor in
    the multicellular evolution towards complexity.

    3. That epigenetic inheritance and the obligate recursion to the
    unicellular state become the basis of a new evolutionary theory.

    I disagree with point 1, as I think some nonliving states could
    also be characterized by those principles (eg, chemical
    cycles/hypercycles in marine vents, and other outcomes derived
    from "energy flows"); besides, some previous "info stuff" has to
    be in place. Then I completely agree with point 2, for signaling
    is not just another characteristic of the cell, it is "the"
    eukaryotic trait par excellence.  And I am curious on how point 3
    could be further substantiated... In this respect I recommend the
    two papers that Bill sent to the list a few weeks ago. Do we need
    to postulate the emergence of a form of "self-referential
    cognition" right at the beginning?
    Perhaps!

    All the best--Pedro



    El 09/01/2018 a las 19:05, Bill escribió:
    Dear Pedro and Colleagues,

    I have been following the thread of comments with great interest,
    all of  which have all been occasioned by John Torday's profound
    insights about the nature of evolutionary development in light of
the importance of cell-cell signaling and molecular biology. From the comments, it is clear that there is a strong impulse to
    seek a means of integrating the role of symbiogenesis, viruses
    and mobile elements, multilevel selection, niche construction,
    genomic plasticity into a common narrative with an informational
    perspective at its foundation.
        In the spirit of that line of discussion, I am offering two
    links that discuss evolution as an biologic information
    management system. Some of this work shares direct commonality
    with John's, since he and I are frequent collaborators.

    http://www.mdpi.com/2079-7737/5/2/21/htm
    <http://www.mdpi.com/2079-7737/5/2/21/htm>

    https://www.sciencedirect.com/science/article/pii/S007961071730233X
    <https://www.sciencedirect.com/science/article/pii/S007961071730233X>

    Both of these articles can be considered as complementary to
    Pedro's very fine article, 'How prokaryotes ‘encode’ their
    environment: Systemic tools for organizing the information flow',
    which is in BioSystems.

    I am grateful to John for inviting me to participate in the forum
    and to Pedro for encouraging me to share these manuscripts.

    Best regards,
    Bill

    William B. Miller, Jr., M.D.
    602-463-5236 <tel:%28602%29%20463-5236>
    wbmill...@cox.net <mailto:wbmill...@cox.net>

-- -------------------------------------------------
    Pedro C. Marijuán
    Grupo de Bioinformación / Bioinformation Group
    Instituto Aragonés de Ciencias de la Salud
    Centro de Investigación Biomédica de Aragón (CIBA)
    Avda. San Juan Bosco, 13, planta 0
    50009 Zaragoza, Spain
    Tfno.+34 976 71 3526 <tel:+34%20976%2071%2035%2026>  (& 6818)
    pcmarijuan.i...@aragon.es <mailto:pcmarijuan.i...@aragon.es>
    http://sites.google.com/site/pedrocmarijuan/
    <http://sites.google.com/site/pedrocmarijuan/>
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Pedro C. Marijuán
Grupo de Bioinformación / Bioinformation Group
Instituto Aragonés de Ciencias de la Salud
Centro de Investigación Biomédica de Aragón (CIBA)
Avda. San Juan Bosco, 13, planta 0
50009 Zaragoza, Spain
Tfno. +34 976 71 3526 (& 6818)
pcmarijuan.i...@aragon.es
http://sites.google.com/site/pedrocmarijuan/
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