use mri_surf2surf. And you should have more than 65536 
vertices/hemisphere. Usually the # is closer to 130,000
On Thu, 1 Oct 2009, 
Feng-Xian Yan wrote:

> Hi,
>
>   I run all my subjects using recon-all ?subjid xxx ?autorecon-all. I get
> the cortical thickness value of each vertex (65536 each hemisphere). Then I
> obtain F value and p value of anova analysis using MATLAB. Now, I want to
> map the results of anova to fsaverage. Could these values do that? Or, you
> could recommend me another way to obtain the same map.
>
>
>
> Thank you in advance!
>
>
>
> Feng-Xian
>
>
>
>
> 2009/10/1 Bruce Fischl <[email protected]>
>
>> Hi Feng-Xian
>> have you run recon-all on your anatomical data? What kind of data do you
>> want to map? Is it a functional volume?
>>
>> cheers
>> Bruce
>>
>> On Thu, 1 Oct 2009, Feng-Xian Yan wrote:
>>
>> Hi,
>>>  I have a problem want to solve.
>>> I want to map the data file (.xls or .txt) to fsaverage. What command do I
>>> type?
>>>
>>>
>>>
>>> Thank you in advance!
>>>
>>>
>>> Feng-Xian
>>>
>>>
>
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