Hi Jeff what command did you run to run them over?
cheers Bruce On Thu, 16 Jun 2011, Jeff Sadino wrote: > Hello, > > When FS5 came out, I copied over my FS4 reconstructions to my FS5 Subjects > Directory, and then reran them using the FS5 recon-all stream. This updated > their subject folders with the FS5 changes, but not in as many places as I > would have thought. For example, on 6 test subjects, I created their FS5 > folders from FS4 folders that I copied over and then ran the FS5 recon-all > stream. I also created another copy of their FS5 folders from scratch. The > average difference in their ICV values was -12,000 mm^3. Is it to be > expected that FS5 reconstructions running on FS4 folders will not include > all possible improvements? If I want to get an accurate an ICV measurement > as possible, is it advisable to rerun all of my subjects in FS5, starting > from scratch? > > As always, thank you for your valuable assistance! > Jeff Sadino > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
