Sorry, there was a bug in that version. I've put an updated version on that ftp site doug
On 08/21/2012 03:49 PM, Blazey, Tyler wrote: > Hi, > > I recently installed the updated mri_segstats > (ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.linux). > > This seems to work fine for recalculating the supratentorial volume. > However, it is causing my new recons to fail (see example error > below). Any suggestions? > > Thanks, > > -Tyler > > $Id: mri_segstats.c,v 1.86 2012/07/16 14:39:07 greve Exp $ > cwd > cmdline mri_segstats --id 1 --seg > ./tmp.mri_nu_correct.mni.24644/ones.mgz --i > ./tmp.mri_nu_correct.mni.24644/nu2.mnc --sum > ./tmp.mri_nu_correct.mni.24644/sum.junk --avgwf > ./tmp.mri_nu_correct.mni.24644/output.mean.dat > sysname Linux > hostname login001 > machine x86_64 > user tblazey > UseRobust 0 > Loading ./tmp.mri_nu_correct.mni.24644/ones.mgz > Loading ./tmp.mri_nu_correct.mni.24644/nu2.mnc > Voxel Volume is 1 mm^3 > Generating list of segmentation ids > Found 1 segmentations > Computing statistics for each segmentation > 0 1 0 0 > > Reporting on 0 segmentations > Computing spatial average of each frame > > Writing to ./tmp.mri_nu_correct.mni.24644/output.mean.dat > (standard_in) 1: parse error > > > > ------------------------------------------------------------------------ > > The material in this message is private and may contain Protected > Healthcare Information (PHI). If you are not the intended recipient, > be advised that any unauthorized use, disclosure, copying or the > taking of any action in reliance on the contents of this information > is strictly prohibited. If you have received this email in error, > please immediately notify the sender via telephone or return mail. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
