Hi, I recently installed the updated mri_segstats (ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.linux). This seems to work fine for recalculating the supratentorial volume. However, it is causing my new recons to fail (see example error below). Any suggestions?
Thanks, -Tyler $Id: mri_segstats.c,v 1.86 2012/07/16 14:39:07 greve Exp $ cwd cmdline mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.24644/ones.mgz --i ./tmp.mri_nu_correct.mni.24644/nu2.mnc --sum ./tmp.mri_nu_correct.mni.24644/sum.junk --avgwf ./tmp.mri_nu_correct.mni.24644/output.mean.dat sysname Linux hostname login001 machine x86_64 user tblazey UseRobust 0 Loading ./tmp.mri_nu_correct.mni.24644/ones.mgz Loading ./tmp.mri_nu_correct.mni.24644/nu2.mnc Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 1 segmentations Computing statistics for each segmentation 0 1 0 0 Reporting on 0 segmentations Computing spatial average of each frame Writing to ./tmp.mri_nu_correct.mni.24644/output.mean.dat (standard_in) 1: parse error ________________________________ The material in this message is private and may contain Protected Healthcare Information (PHI). If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail.
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