Can you try it without the expert opts? And what sequence is the data?
On Nov 12, 2012, at 3:35 AM, youngmin huh <ymin1...@gmail.com> wrote: > Hi > I'm working with some images, and freesurfer didn't properly detect some of > their white matter boundaries. > I attached some examples. > I ran recon2 with expert options(-b 20 -n 5). > As you can see, they have inaccurate white matter boundaries in curved area. > I think it's not that highly curved, though. > Any comment will be appreciated. > > Thanks, > > Youngmin Huh > > <image.jpeg><image.jpeg> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
