and what shell are you using On Wed, 7 Aug 2013, Douglas N Greve wrote: > what is your command line? > > > > > On 08/07/2013 10:19 AM, Heather L. Urry wrote: >> Hi folks, >> >> When issuing a recon-all command, I'm seeing the following message: >> >> set: Variable name must contain alphanumeric characters >> >> recon-all stalls and doesn't move forward (doesn't even create the >> subject directory). >> >> I'm using Freesurfer 5.3.0 >> (freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0) on Ubuntu 12.04.2. >> In fact, we just upgraded to this version of Ubuntu from an older >> version of Mandriva and to this latest version of Freesurfer. >> recon-all did not produce this message before these two upgrades. Any >> help you can offer would be most appreciated! Thanks in advance. >> >> Best, >> >> Heather >> >> -- >> Heather L. Urry, Ph.D. >> Department of Psychology >> Tufts University >> 490 Boston Avenue >> Medford, MA 02155 >> >> email: heather.u...@tufts.edu <mailto:heather.u...@tufts.edu> >> phone: 617-627-3733 >> fax: 617-627-3181 >> >> http://ase.tufts.edu/psychology/ebbl >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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