Bastian, Hi, I've posted a new mris_convert which should solve the problem for you. It's built for Centos 6, so if you need it for another platform, let me know. It's here:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux-centos6_x86_64/ Nick On Wed, 2014-05-28 at 11:42 +0200, Bastian Cheng wrote: > Dear Freesurfer-Experts, > > I would like to create gifti-surfaces to use in matlab. > > That's what I am doing so far (latest FS-Version): > > mris_convert lh.white lh.white.gii > > I then try to open it using the "gifti" command (g=gifti('file.gii')) > (http://www.artefact.tk/software/matlab/gifti/) > > however, I get an error message from matlab: > > >>>>>>>>>>> > ??? Attempt to reference field of non-structure array. > Error in ==> gifti.subsref at 28 > varargout{1} = this.data{j}.space.MatrixData; > Error in ==> gifti.struct at 17 > [values{i,:}] = subsref(this(:), substruct('.',names{i})); > Error in ==> gifti.display at 17 > eval([display_name ' = struct(this);']); > >>>>>>>>>>>>>>> > > Am I missing something? Is there anything special with the .gii file form FS? > > here is the surface file I created with mris_convert: http://we.tl/B2n4Ex6ifJ > > I am able to open the gifti file with freeview. > I also updated the gifti-toolbox in matlab to the latest version. > > > Any help is appreciated! > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
