I used it as this: tksurfer subject hemisphere surface -snap <file name> -overlay <file name> And it adds a* gray scale* version of sulcus map to the plain gray, How can I activate colors?
Thanks, Saeed On Thu, Aug 6, 2015 at 4:20 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: > load them as "curvature" files > > cheers > Bruce > > > On Thu, 6 Aug 2015, Saeed Mahdizadeh Bakhshmand wrote: > > And are they treated as label files (e.g. lh.aparc.annot ) in the label >> directory? And how they can be added to the tksurfer snapshot procedure? >> >> On Thu, Aug 6, 2015 at 4:04 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> >> wrote: >> no, the scalar overlays are stored separately (e.g. lh.curv, >> lh.sulc, etc...) >> On Thu, 6 Aug 2015, Saeed Mahdizadeh Bakhshmand wrote: >> >> Hello, >> Is scalar overlay information embedded into surface >> file itself? When I open >> them in freeview they are loaded with color overlays >> (sulcus/gyrus), but >> when I load same models into 3D slicer or take a >> snapshot in tksurfer, they >> are plain gray. >> >> Thanks, >> Saeed >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom >> it is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender >> and properly >> dispose of the e-mail. >> >> >> >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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