Ok, but how about the mophing process? Isn't inflated brain transformed to the sphere directly? Is there a middle step that is hidden (e.g. inflatted to the brain flat maps and spreading these maps over the sphere)? I want to generate a contineous transformation video from WM to inflated and inflated to a sphere. On Aug 6, 2015 7:45 PM, "Bruce Fischl" <fis...@nmr.mgh.harvard.edu> wrote:
> yes, because it is unfolding on the sphere to recover metric properties. > -w 1 gives you every iteration. You will need to show curvature or you > won't see anything > > On Thu, 6 Aug 2015, Saeed Mahdizadeh > Bakhshmand wrote: > > > Hello, > > What are your suggested values for w and n in mris_sphere? I set w to 5 > and > > all of the iterations are spheres! > > > > Thanks, > > Saeed > > > > On Wed, Aug 5, 2015 at 1:06 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu > > > > wrote: > > Hi Saeed > > > > if you specify -w <n> to mris_inflate or mris_sphere it will > > save snapshots > > of the process every nth iteration > > cheers > > Bruce > > > > > > On Wed, 5 Aug 2015, > > Saeed Mahdizadeh Bakhshmand wrote: > > > > > Hello, > > > > > > Since surface deformation from WM to inflated surface is a > > gradual process, > > > I assume that interim surfaces can also be saved and > > visualized, as I have > > > seen in the ppt of "Analyzing the Individual Subject" tutorial > > session > > > (slide #32). I am curious to know which command and options > > can generate > > > that type of gradual deformations from pial surface to > > spherical surface, so > > > that viewer can visually track region or points of interest? > > > > > > Best, > > > > > > Saeed > > > > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > The information in this e-mail is intended only for the person to whom > > it is > > addressed. If you believe this e-mail was sent to you in error and the > > e-mail > > contains patient information, please contact the Partners Compliance > > HelpLine at > > http://www.partners.org/complianceline . If the e-mail was sent to you > > in error > > but does not contain patient information, please contact the sender > > and properly > > dispose of the e-mail. > > > > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >
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