Hi Kirstie, Here's an example of how to do this in PySurfer: http://pysurfer.github.io/examples/plot_parc_values.html
Hope that helps, Michael On Tue, Mar 29, 2016 at 8:08 AM, dgw <dgwake...@gmail.com> wrote: > Hi Kirstie, > > You could write your own CLUT file with the color corresponding to the > correlation you want to show? > Just open up the file and play with the values in the color columns. > Then simply load the color table in Freeview and use it to visualize > the annotation. > > There are of course other ways, but this is probably the quickest. > > hth > d > > > On Tue, Mar 29, 2016 at 11:03 AM, Kirstie Whitaker <kw...@cam.ac.uk> > wrote: > > Hi, > > > > I'd like to show correlation coefficients by region on the brain > surface. So > > for example, if I've calculated a modular decomposition in a network > > analysis for each region of the D-K atlas I'd like to be able to color > each > > atlas region according to the module it has been assigned to. > > > > It seems like I have to do something with the ?h.aparc.annot files and a > > colour lookup table but I'm not sure exactly what. > > > > Thank you! > > Kx > > > > -- > > Kirstie Whitaker, PhD > > Research Associate > > > > Department of Psychiatry > > University of Cambridge > > > > Mailing Address > > Brain Mapping Unit > > Department of Psychiatry > > Sir William Hardy Building > > Downing Street > > Cambridge CB2 3EB > > > > Phone: +44 7583 535 307 > > Website: www.kirstiewhitaker.com > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > The information in this e-mail is intended only for the person to whom > it is > > addressed. If you believe this e-mail was sent to you in error and the > > e-mail > > contains patient information, please contact the Partners Compliance > > HelpLine at > > http://www.partners.org/complianceline . If the e-mail was sent to you > in > > error > > but does not contain patient information, please contact the sender and > > properly > > dispose of the e-mail. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >
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