Hello everyone, I am following this page to process fMRI data: http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastFunctionalConnectivityWalkthrough
I am able to run until step-3 but at step 4, I am not sure what should be directory to run this command. If I run the command in SUBJECTS_DIR directory, it runs for a second and creates a mean*.config file. But next step 5 requires *.config file to run, not the mean*.config Just a quick background: I preprocessed all subjects structural data using recon-all and the processed folders are in my FreeSurfer SUBJECTS_DIR path and the folder after preprocessing functional data (after running step-3) is also in SUBJECTS_DIR path. Any help would be greatly appreciated. MJ
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