Hi Douglas Greve,
Yes, I'm getting the same result as mentioned below.
Regards,
Janani
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Did you get exactly the same error?
On 07/14/2017 02:05 AM, M Janani wrote:
>
> Hi Douglas Greve
> <https://www.mail-archive.com/[email protected]&q=from:%22Douglas+Greve%22>,
>
> Thanks for your support.
>
> I tried with the --reshape-factor 6. But it didn't work for me.
>
> The segmentation was created using the below mentioned data
>
> 1.SPM standard ROI
>
> 2..dat file generated using the T1.nii(available in SPM8 template) and
> fsaverage.
>
> Please help us to proceed further.
>
> Regards,
>
> Janani
>
> -----------------------------------------------------------------------------------------------------------------------------------------------------------------------
>
> How did you create the segmentation? You can change the shape of the
> seg with mri_surf2surf --reshape 6 --s fsaverage --hemi lh --sval
> seg.mgh --tval seg.reshape.mgh
>
> On 7/7/17 10:15 AM, M Janani wrote:
> Hi Team,
>
> I'm attempting to extract cortical thickness values for a
> region-of-interest (ROI) defined in volume spacesubject for PiB MRI.
>
> I got the below mentioned error while computing the stats value
> cwd
>
> cmdline mri_segstats --seg
> freesurfer/subjects/fsaverage/surf/lh.fsaverage.CBLROI.mgh --in
> lh.thickness.fsaverage.mgh --sum segstats-CBLROI.txt
>
> sysname Linux
> hostname teslak80
> machine x86_64
> user lakshman
> UseRobust 0
> Loading /freesurfer/subjects/fsaverage/surf/lh.fsaverage.CBLROI.mgh
> Loading lh.thickness.fsaverage.mgh
> ERROR: dimension mismatch between input volume and seg
> input 27307 1 6
> seg 23406 1 7
>
> I tried with the solution provided in the below mail, but it didn't
> work for me
>
> https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2013-January/027405.html<https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-January/027405.html>
>
> <https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-January/027405.html>
>
> <https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-January/027405.html>
>
> Any help would be really helpful.
> Regards,
> Janani
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[email protected]
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