Hi Seán
I'm not sure. I think Satra posted the original issue, so maybe he knows.
Satra?
cheers
Bruce
On
Thu, 19 Oct 2017, Seán Froudist Walsh wrote:
Hi,
Was the following issue ever solved? (sorry hit send too early!)
https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg50297.html
I tried and, like the previous two people it fails on mri_watershed.
https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg50297.html
Best wishes,
Sean
Hi Mike
it's hard to say without looking at the data. if you upload the subject dir we
will take a look
Bruce
On Thu, 24 Nov 2016, Michael Craig wrote:
Hi All,
I am trying to run recon-all on the Allen Brain Institute T1 images. It works
without any issue on all but one subject (H0351.1009).
I saw this post from a few years ago describing the exact problem I’m having,
but don’t see a solution. Has anyone figured out how to get this subject to run
in recon-all? Or is it simply a matter of there not being enough contrast
between grey and white matter? Thanks for the help!
https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-July/031482.html
Best wishes,
Mike
On 19 October 2017 at 15:05, Seán Froudist Walsh <froud...@tcd.ie> wrote:
Hi,
Was the following issue ever solved?
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