My guess is that something is going wrong with the backgrounding. Try running it without the --bg option. You can run it with a few (eg, 100) iterations just to see if it finishes.
On 07/05/2018 12:34 PM, Ting Li wrote: > > External Email - Use Caution > > Dear Freesurfer Experts, > > I am running the multiple comparison (permutation) on a MAC with the > following code. It has taken 8 hours and has not finished yet. It > gives me Poll jobs information without end. According to tutorial > information, it will only take around 20 minutes. Do you know what > should I do if I want to use this perm multiple comparison? I have > attached my MAC system information and the Poll jobs information. > Thanks a lot! > > Best wishes, > Ting > > mri_glmfit-sim \ > > --glmdir lh.volume_70_sTIV_perm.glmdir \ > > --perm 1000 4.0 neg \ > > --cwp 0.05\ > > --2spaces \ > > --bg 2 > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
