Can you send the recon-all.log files for two of the runs that should be
identical?
On 4/17/2020 11:15 AM, Xiaojiang Yang wrote:
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No. I just checked, they are not identical. Although some of numbers
are the same, many are different.
Xiaojiang
Are the other results identical? Eg, lh.aparc.stats?
On 4/17/2020 10:49 AM, Xiaojiang Yang wrote:
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Dear Freeserfer developers,
I have run recon-all for a bunch of subjects on the same machine
forseveral times. When I use the “mris_anatomical_stats”to calculate
thestatistics (specifically, I am interested in average
corticalthickness), I found that for the same subject I got different
results,as shown below:
$ mris_anatomical_stats -b QEN001 lh
…
128449862392433752.588 0.8760.1230.026
1496133.3/xxx…/subjects/QEN001/surf/lh.white
$
$ mris_anatomical_stats -b QEN001_old lh
…
128449862412295542.404 0.8350.1230.026
1496133.3/xxx…/subjects/QEN001_old/surf/lh.white
The results shows that some of the stats numbers ( such as the
numberof vertices) are the same, but the “average cortical thickness
+-standard deviation (mm)”are different, and they differ quite a lot.
I have tried several subjects; some of them get the
all-the-sameresults, some of them not.
I am sure the subjects and the corresponding images are the same.
Arethese expected results?
Thanks!
Xiaojiang
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