Hi Lochana,
We embed Jmol and redistribute Jmol.jar in our free StarBiochem application
(http://web.mit.edu/star/biochem/). The StarBiochem app has a user interface
that drives Jmol with scripts through the JmolViewer interface. Although the
scripting interface works and does most things we want, it took us a very long
time to understand how to use it properly.
As a Java programmer, I would have preferred working with a well documented
JmolViewer interface that exposed the complete functionality and architecture
of Jmol in a programmer friendly way. StarBiochem uses the SimpleJmolViewer
implementation of the JmolViewer interface. We like to use interfaces in
StarBiochem to provide some isolation for its various components. StarBiochem
required some functionality available in the SimpleJmolViewer but not exposed
in the JmolViewer interface. To get to that functionality we extended the
JmolViewer interface and implemented a class that uses the new interface and
wraps SimpleJmolViewer.
Jmol is a wonderful tool. It is very fast in both loading and execution. I
would guess that we have had about 20,000 StarBiochem (Jmol) users world wide
in the last year. We rarely get a bug report and, when we do, it rarely has
anything to do with the behavior of the embedded Jmol. We expect the number
StarBiochem users to be significantly higher in 2012, so we are very happy that
Jmol is solid.
--Chuck
----- Original Message -----
From: Nicolas Vervelle
To: lochana menikarachchi ; jmol-users@lists.sourceforge.net
Sent: Monday, January 30, 2012 2:46 AM
Subject: Re: [Jmol-users] JmolViewer
Hi,
I think you can use Jmol.jar for this purpose.
It will probably contain a lot more that you want to use, but it should work.
Or maybe JmolData.jar, I'm not sure what's in it.
Nico
On Sun, Jan 29, 2012 at 3:02 AM, lochana menikarachchi <locha...@yahoo.com>
wrote:
Hi All,
I was looking for a JmolViewer jar file that I can embed in a stand alone
application. I can see JMol application and applet viewer in the downloads but
not a jar file that can be used for developing a stand alone application. How
do I go about this??
Thanks.
Lochana
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