Dear Pshemak,

Thanks so much -- your suggestion enabled Java 7 update 65 to work 
with Jmol on my Windows 7 system.

1. I used Control Panel, Programs, Uninstall to uninstall the 
non-working Java 7 update 65.

2. Using the free Windows search program Agent Ransack (truly 
excellent, blows away Windows Explorer for finding system files), I 
located these:

C:\Users\Eric Martz\AppData\Roaming\Oracle
C:\ProgramData\Oracle
C:\Users\Eric Martz\AppData\LocalLow\Sun
C:\ProgramData\Sun

I deleted all 4 of those directories and all their contents.

3. I went to java.com and downloaded the installer for Java 7 update 
65, and installed it. Now Jmol_S works again.

OTHER OBSERVATIONS

After uninstalling Java 7 update 65, and installing Java 7, update 
60, Jmol_S worked. I wondered if then upgrading to 65 would run 
Jmol_S. It did NOT.

I have explained two ways to get Jmol to work again here:

http://proteopedia.org/wiki/index.php/Installing_and_enabling_Java#Windows

-Eric

At 7/25/14, you wrote:
>I had similar problems (I reported them some time ago).  They were
>limited to one Windows machine (Win 7, Firefox, Chrome, IE) of 3 tried
>(Win 7 and Win 8).
>
>My problem was with the update procedure.  It was insufficient to
>uninstall the old version, I had to delete (after uninstalling) all Java
>directories (hiding under Oracle and even Sun Systems names in Users
>directories).
>
>After clean up, it works fine.
>
>One curiosity: I have tested multiple Java applets (not just Jmol) and
>only Jmol did not work for me (it never fully loaded to get to the
>permission window, no error messages).
>
>Please report back if it work for you too.
>
>PM
>
>
>
>
>On 7/25/2014 7:26 PM, Eric Martz wrote:
> > In Windows 7, my tests indicate that Java 7 update 65 does not work
> > with the current Jmol_S, or recent 14.0.17 Jmol_S. However, update 60
> > does work.
> >
> > Do others confirm this?
> >
> > Previous emails indicate that Java 7 update 65 runs Jmol applet in
> > Windows 8 (Angel H), and that Java 8 runs Jmol applet (Henry R, OS
> > not specified?).
> >
> > However, on Windows 7, when I upgraded Java 7 from 60 to 65 today, I
> > could not get the current Jmol_S applet to work in IE 11, Firefox 31,
> > or Chrome (current).
> >
> > I tested Jmol 14.2.3
> > http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm?_USE=SIGNED
> > and Jmol_S 14.0.17
> > http://bioinformatics.org/firstglance/fgij/fg.htm?mol=1d66&JAVA
> >
> > Curiously, a very old old unsigned applet (11.4.RC3) worked in
> > Firefox and Chrome (but not in IE).
> > http://www.umass.edu/molvis/tutorials/dna/dnapairs.htm
> >
> > All the above test sites work fine with Java 7 update 65 on OS X
> > (Mavericks) with Safari or Firefox.
> >
> > All the above test sites work fine with Java 7 update 65 on Windows
> > XP in Firefox 31 or Internet Explorer 8.
> >
> > I then uninstalled Java from my Windows 7, downloaded and installed
> > Java 7 update 60
> > (x86 version).
> > 
> http://www.oracle.com/technetwork/java/javase/downloads/java-archive-downloads-javase7-521261.html
> > Everything worked again.
> >
> > Eric
> >
> >
> >


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